Statistics and Breed-wide Allele Frequency - Biewer

Updated Apr 19, 2024

DLA Class I Haplotype Frequencies

DLA1 #STR typesBiewer (n=137)Biewer Yorshire Terrier (n=54)Biewer Terrier (n=220)Yorkshire Terrier (n=16)Biro Biewer (n=3)
1005389 371 277 1810.0260.0090.014----
1007380 372 281 1820.0040.009--0.03--
1008386 373 289 1820.007----0.06--
1012388 369 289 1880.2260.1570.2270.280.2
1014375 373 287 1780.0290.0090.0590.09--
1016382 371 277 1780.0220.0190.0110.03--
1019380 373 287 1850.0730.0830.0570.09--
1030380 373 293 1780.4490.3520.4930.310.5
1035386 373 277 184--0.009------
1040380 371 277 1860.0950.2040.080----
1043393 381 277 1830.0070.0090.011----
1046376 379 291 1800.029--0.023----
1068380 373 287 181--0.009------
1087380 371 277 1780.004--------
1092376 379 277 181--0.037--0.06--
1104386 373 289 1860.0110.0190.014----
1105382 379 277 1780.004------0.3
1115386 371 277 182----0.002----
1117376 373 277 180----0.002----
1118376 377 277 1800.0040.019------
1130380 373 287 1780.0070.009------
1131388 379 277 1810.0040.0460.0070.03--

DLA Class II Haplotype Frequencies

DLA2 #STR typesBiewer (n=137)Biewer Yorshire Terrier (n=54)Biewer Terrier (n=220)Yorkshire Terrier (n=16)Biro Biewer (n=3)
2003343 324 2820.2630.2130.2480.380.2
2005339 322 2800.0400.0090.023----
2013345 327 2840.0470.1390.066----
2016339 323 2840.0800.0930.0680.09--
2021339 324 2680.004--------
2023341 323 2820.4490.3520.4950.310.5
2037341 327 2800.0290.0090.0590.09--
2040345 327 2800.0620.0830.0250.03--
2044343 324 268--0.037--0.06--
2053343 324 280--0.009------
2074341 324 2840.0040.0190.002----
2080339 325 2760.0040.009--0.03--
2081343 322 2820.0110.0190.014----
2082339 325 268--0.009------
2083339 324 2820.004------0.3
2084339 323 2680.004--------

Allele Frequencies

#Locus NameAlleleBiewer (n=137)Biewer Yorshire Terrier (n=54)Biewer Terrier (n=220)Yorkshire Terrier (n=25)Biro Biewer (n=3)
1AHT121 92----0.0160.040.2
940.004--0.0110.06--
980.0950.1480.0980.20--
1000.2120.0650.1160.20--
1020.3030.3060.3480.120.7
1040.2120.3610.2250.08--
1060.033--0.0140.08--
1080.1090.0830.1270.20--
1100.0070.0280.0200.02--
1120.0260.0090.020----
122----0.002--0.2
124----0.002----
2AHT137 1310.2260.2780.2320.200.3
133------0.08--
1370.3320.2780.3200.40--
1390.1310.1200.111----
143--0.009------
147----0.0110.04--
1490.004--0.005----
1510.2520.2690.2550.20--
1530.0550.0460.0660.060.7
155------0.02--
3AHTH130 1170.011--0.011----
1190.3720.3890.3450.140.7
1210.1720.1570.0950.080.2
1230.0220.0740.0180.08--
125----0.0020.02--
1270.3320.2690.4090.240.2
1290.0840.1020.1000.40--
1310.0070.0090.0180.02--
133------0.02--
4AHTh171-A 217----0.002----
2190.6350.7780.7090.500.3
2250.2040.0930.1340.120.5
227----0.0020.04--
2290.004--0.0020.04--
2310.1130.1110.1160.120.2
2330.0290.0190.0270.14--
2350.011--0.007----
2370.004----0.04--
5AHTh260 2380.0470.0740.0230.22--
240------0.02--
2420.0440.0190.0250.12--
2440.0880.0370.0730.020.2
2460.2660.2410.2730.360.3
2480.0770.0650.118----
2500.4780.5370.4840.260.5
254--0.0280.005----
6AHTk211 870.4710.5460.4910.210.7
890.018--0.0200.04--
910.4270.4350.3680.650.3
950.0150.0090.0550.06--
970.0690.0090.0660.04--
7AHTk253 2840.0510.0090.0550.020.3
2860.0470.0280.0520.02--
2880.2010.3430.2300.42--
2900.1500.2690.1320.24--
2920.5400.3520.5320.260.7
2940.011----0.04--
8C22.279 1160.1170.1110.0890.020.2
1180.0770.0370.0390.12--
1200.0040.0090.0090.04--
1220.0110.0090.0050.04--
1240.1860.1940.2000.04--
1260.3180.4170.4340.460.8
1280.2700.2220.2160.18--
1300.018--0.0090.10--
9FH2001 124------0.12--
1320.4890.4720.5200.400.2
136--0.009--0.02--
140----0.0090.12--
1440.0770.0930.0550.080.2
1480.4200.3980.3980.240.7
1520.0150.0090.0180.02--
156--0.019------
10FH2054 1480.2300.2590.2020.34--
1520.1170.0560.1590.260.5
1560.3500.4440.3570.320.5
1600.2010.1390.191----
1640.0620.0460.0660.02--
1680.0400.0560.0250.06--
11FH2848 2320.011--0.002----
2340.0840.0560.070----
2360.3210.3330.3340.24--
2380.1790.1300.1570.220.5
2400.3870.3980.3930.400.5
242----0.002----
2440.0180.0830.0410.14--
12INRA21 910.1970.1940.211--0.2
950.1930.1480.2000.420.3
970.2990.2590.1700.220.3
99--0.028--0.10--
1010.2990.3430.4050.260.2
1050.0110.0280.014----
13INU005 1060.0110.0560.0450.06--
1100.047--0.0360.10--
120----0.002----
1240.8280.7960.7890.561.0
1260.0510.0930.0340.08--
128----0.0110.02--
1300.018--0.0200.12--
1320.0440.0560.0610.04--
134------0.02--
14INU030 1440.2150.2500.2140.280.3
1460.0360.0280.032----
1480.0580.0830.0410.10--
1500.5260.5650.6500.420.5
1520.0840.0280.0090.080.2
1540.0800.0460.0550.10--
156------0.02--
15INU055 208------0.04--
2100.5260.5090.6020.460.3
2120.0290.0460.0300.06--
2140.1750.1300.1200.20--
2160.0620.0930.0680.02--
2180.2080.2220.1800.220.7
16LEI004 850.0730.1020.1160.18--
950.8280.8060.7430.700.8
970.0910.0930.1390.02--
101------0.02--
1050.004------0.2
1070.004--0.0020.08--
17REN105L03 2290.011--------
2310.0220.0830.0360.08--
2330.3250.2310.3000.08--
2350.1020.1300.1430.08--
2370.3100.2310.2770.24--
2410.2300.3240.2430.501.0
247------0.02--
18REN162C04 1980.004----0.14--
2000.0260.0460.0590.06--
2020.0990.1020.0890.120.3
2040.0510.0740.0610.040.3
2060.3180.2780.2390.060.3
2080.0360.0190.0450.06--
2100.4670.4810.5070.52--
19REN169D01 2020.2040.2040.1520.160.2
210--0.0190.0140.08--
2120.3540.3700.4200.180.2
2160.2520.2870.2800.420.7
2200.1900.1200.1340.16--
20REN169O18 158------0.04--
1600.044--0.0300.16--
1620.1750.2220.1410.40--
1640.6420.4810.6770.301.0
1660.0950.1850.105----
1680.0220.0280.0410.02--
1700.0220.0830.0070.06--
172------0.02--
21REN247M23 2680.2630.2410.2070.24--
2700.0220.0560.0390.22--
2720.4050.4260.4090.320.2
276--------0.3
2780.3100.2780.3450.220.5
22REN54P11 2220.0150.1020.0270.04--
2240.007--0.007----
2260.1930.2130.2320.060.2
230------0.02--
2320.2480.1760.1660.340.2
2340.0990.0370.0890.020.3
2360.2700.3430.3320.500.3
2380.1680.1300.1480.02--
23REN64E19 1390.1790.2410.1320.220.7
1430.015--0.009----
1450.4010.2690.4750.06--
1470.3690.4630.3230.56--
1490.0180.0190.0270.040.3
1510.007--0.0070.02--
1530.007--0.0270.08--
1550.0040.009--0.02--
24VGL0760 120.2550.4440.2750.140.3
130.0110.0370.011----
140.0400.0280.039----
20.20.0290.0190.0410.040.3
21.20.3140.2500.3250.36--
22.20.0330.0280.0730.14--
23.20.1530.0740.1250.24--
24.20.1610.1200.1090.080.3
25.20.004--0.002----
25VGL0910 15.1------0.02--
16.10.0660.0280.1230.16--
17.10.004--0.0050.08--
18.10.0150.0090.0340.04--
190.0840.0650.032----
19.10.2230.3060.2660.100.3
200.0260.056--0.06--
20.10.0110.0090.0230.160.2
210.004--------
21.10.1750.1300.2050.080.3
220.0330.0190.048----
22.10.3500.3610.2570.100.2
23----0.002----
23.10.007--0.0070.14--
24.10.0040.019--0.06--
26VGL1063 8----0.0020.02--
9------0.02--
11------0.02--
120.022--0.023----
130.022--0.0160.04--
140.2630.1480.2660.360.2
150.3980.4540.4090.320.8
160.1200.1670.1200.02--
170.0440.0650.0500.10--
180.0880.1390.0660.10--
190.0070.0090.002----
200.0360.0190.041----
21----0.005----
27VGL1165 15------0.02--
18------0.02--
190.4820.4540.5660.320.8
200.2520.1570.1020.14--
210.0800.0650.0590.060.2
220.004--------
250.0040.019--0.08--
260.0180.0740.0340.06--
27----0.005----
280.0880.0740.0860.26--
290.0690.1480.1320.04--
300.0040.0090.011----
31----0.005----
28VGL1828 140.1170.1110.080----
150.0440.0830.027--0.2
160.2080.2410.1590.280.3
170.1200.1480.1410.120.3
18--0.0090.0230.040.2
190.3720.2500.3610.26--
200.0470.0190.0200.02--
210.047--0.0500.14--
220.0440.1390.1360.10--
23----0.0020.04--
29VGL2009 100.011--0.0090.04--
110.2450.1940.2750.12--
120.029--0.0020.020.2
130.5730.6480.5230.440.3
140.0260.0460.0750.260.5
150.1060.1110.1020.12--
160.011--0.014----
30VGL2409 130.0150.0190.0050.020.2
140.007--0.0140.02--
150.007--0.0070.06--
160.0770.0830.1570.08--
170.2300.3150.2270.400.2
180.3140.2310.3320.380.7
190.011--0.0140.02--
200.3390.3520.2390.02--
21----0.007----
31VGL2918 120.0800.1760.1200.140.2
130.1240.0090.1360.140.2
140.0770.1110.0820.12--
150.018--0.0320.10--
160.0040.0090.016----
17.30.5400.4630.4700.280.7
18------0.02--
18.30.0880.1110.0340.14--
19.30.0690.1020.0950.06--
20.3--0.019------
22.3----0.014----
32VGL3008 130.0550.0560.027----
150.1350.0930.1550.140.3
160.0260.1020.0680.02--
170.1280.2040.0700.080.2
180.4230.2780.3430.320.2
190.0770.0280.1020.16--
200.1570.2410.2200.240.3
21----0.002----
22----0.0110.04--
33VGL3235 120.0040.0090.0140.04--
130.1240.0650.1090.04--
140.2260.2780.1930.380.2
150.1090.0930.0950.06--
160.0440.0370.0430.12--
170.2630.1390.2230.100.3
180.1610.1850.1840.160.5
190.0040.0090.0200.04--
200.0150.0090.0110.02--
210.0510.1760.1070.04--

Standard genetic assessment based on 33 autosomal STR loci

Biewer

  NNaNeHoHeF
Mean4398.3643.5290.6740.6860.018
 SE 0.4170.1850.0200.0190.005

Biewer Yorshire Terrier

  NNaNeHoHeF
Mean546.0003.3880.6900.672-0.029
 SE 0.2870.1730.0230.0210.014

Biewer Terrier

  NNaNeHoHeF
Mean2207.2733.4230.6590.6740.023
 SE 0.3670.1900.0210.0200.008

Yorkshire Terrier

  NNaNeHoHeF
Mean256.8483.8950.6950.7200.034
 SE 0.2910.2270.0180.0140.019

Biro Biewer

  NNaNeHoHeF
Mean32.6362.2110.5860.483-0.190
 SE 0.1470.1360.0570.0350.076

Standard genetic assessment based on 7 STRs in the DLA region

Biewer

  NNaNeHoHeF
Mean4396.7142.5940.5990.6010.002
 SE 0.8010.1720.0300.0300.005

Biewer Yorshire Terrier

  NNaNeHoHeF
Mean546.1433.0840.6960.660-0.060
 SE 0.6520.2440.0260.0300.027

Biewer Terrier

  NNaNeHoHeF
Mean2205.2862.3840.5660.5680.006
 SE 0.6910.1490.0330.0300.009

Yorkshire Terrier

  NNaNeHoHeF
Mean255.5712.8370.5200.6300.183
 SE 0.4450.2180.0540.0320.066

Biro Biewer

  NNaNeHoHeF
Mean32.4292.0960.7620.460-0.535
 SE 0.2750.2310.1460.0830.116

Standard genetic assessment for individual STR loci

Biewer

#LocusNNaNeHoHeF
1AHT121439124.9790.8150.799-0.020
2AHT137439104.2080.7860.762-0.031
3AHTH13043993.5850.7130.7210.011
4AHTh171-A43992.0000.4970.5000.007
5AHTh26043983.1490.6700.6820.019
6AHTk21143952.4960.5940.5990.010
7AHTk25343962.9680.6580.6630.007
8C22.27943983.8520.7290.7400.016
9FH200143982.4480.5690.5910.037
10FH205443964.1900.7610.7610.001
11FH284843973.4180.7150.707-0.011
12INRA2143963.9110.7110.7440.045
13INU00543991.5790.3550.3670.031
14INU03043972.4780.6010.597-0.008
15INU05543962.6620.6080.6240.026
16LEI00443961.6010.3710.3750.011
17REN105L0343974.0390.7520.7520.001
18REN162C0443973.1010.6470.6780.045
19REN169D0143953.6190.7310.724-0.010
20REN169O1843982.3100.5510.5670.028
21REN247M2343953.1300.6950.681-0.021
22REN54P1143984.6010.7220.7830.077
23REN64E1943983.0950.6060.6770.105
24VGL076043994.6070.7270.7830.072
25VGL0910439155.1960.8200.808-0.015
26VGL1063439133.8750.7130.7420.039
27VGL1165439133.1740.6650.6850.029
28VGL1828439105.0790.8000.8030.004
29VGL200943972.6580.5990.6240.040
30VGL240943993.9930.7520.750-0.003
31VGL2918439113.5810.6920.7210.039
32VGL300843994.6870.7880.787-0.002
33VGL3235439106.2010.8130.8390.030

Biewer Yorshire Terrier

#LocusNNaNeHoHeF
1AHT1215473.8800.7960.742-0.073
2AHT1375464.1130.7590.757-0.003
3AHTH1305463.7870.7590.736-0.032
4AHTh171-A5441.5970.3700.3740.009
5AHTh2605472.7890.6110.6410.047
6AHTk2115442.0490.5000.5120.023
7AHTk2535453.1830.6480.6860.055
8C22.2795473.6400.7040.7250.030
9FH20015462.5600.5740.6090.058
10FH20545463.4210.6670.7080.058
11FH28485453.3730.7780.704-0.106
12INRA215464.0670.7040.7540.067
13INU0055441.5410.3890.351-0.107
14INU0305462.5500.5930.6080.025
15INU0555452.9740.6480.6640.024
16LEI0045431.4970.3520.332-0.059
17REN105L035454.2380.6670.7640.127
18REN162C045463.0550.7410.673-0.101
19REN169D015453.6250.8520.724-0.176
20REN169O185453.0940.7040.677-0.040
21REN247M235443.1290.7960.680-0.170
22REN54P115464.5000.7410.7780.048
23REN64E195452.9000.7590.655-0.159
24VGL07605483.5300.7960.717-0.111
25VGL091054104.0080.7780.751-0.036
26VGL10635473.5780.7590.721-0.054
27VGL11655483.7290.7220.7320.013
28VGL18285485.5120.8150.8190.005
29VGL20095442.1170.5930.528-0.123
30VGL24095453.5240.6850.7160.043
31VGL29185483.5600.8330.719-0.159
32VGL30085475.0150.8330.801-0.041
33VGL323554105.6790.8520.824-0.034

Biewer Terrier

#LocusNNaNeHoHeF
1AHT121220124.7140.7950.788-0.010
2AHT13722074.2000.8050.762-0.056
3AHTH13022083.2620.6770.6930.023
4AHTh171-A22081.8690.4730.465-0.017
5AHTh26022073.0380.6590.6710.018
6AHTk21122052.6020.6180.616-0.004
7AHTk25322052.7890.6450.641-0.006
8C22.27922083.5140.6950.7150.028
9FH200122052.3120.5140.5680.095
10FH205422064.2560.7680.765-0.004
11FH284822073.3620.6910.7030.017
12INRA2122053.6030.7000.7220.031
13INU00522081.5850.3590.3690.027
14INU03022062.1100.5230.5260.006
15INU05522052.4100.5860.585-0.002
16LEI00422041.7090.4140.4150.003
17REN105L0322054.0350.7550.752-0.003
18REN162C0422063.0210.6090.6690.090
19REN169D0122053.3750.6860.7040.025
20REN169O1822062.0320.5000.5080.016
21REN247M2322043.0220.6360.6690.049
22REN54P1122074.5080.7320.7780.060
23REN64E1922072.8670.5450.6510.162
24VGL076022094.6010.6860.7830.123
25VGL0910220115.0350.8180.801-0.021
26VGL1063220113.8180.7270.7380.015
27VGL116522092.7750.6450.640-0.009
28VGL1828220104.8810.8050.795-0.012
29VGL200922072.7380.6180.6350.026
30VGL240922094.1020.8050.756-0.064
31VGL291822093.6650.6640.7270.087
32VGL300822094.7350.7550.7890.043
33VGL3235220106.4170.8360.8440.009

Yorkshire Terrier

#LocusNNaNeHoHeF
1AHT1212596.5450.8800.847-0.039
2AHT1372573.9680.8000.748-0.070
3AHTH1302583.9810.6800.7490.092
4AHTh171-A2573.2980.8000.697-0.148
5AHTh2602563.8340.6800.7390.080
6AHTk2112552.1370.5420.532-0.018
7AHTk2532563.2890.8000.696-0.149
8C22.2792583.6550.6800.7260.064
9FH20012573.9430.6400.7460.143
10FH20542553.4530.7600.710-0.070
11FH28482543.5010.6000.7140.160
12INRA212543.3070.7200.698-0.032
13INU0052582.8540.6400.6500.015
14INU0302563.5510.6400.7180.109
15INU0552563.2720.7600.694-0.094
16LEI0042551.8880.3600.4700.235
17REN105L032563.0560.7200.673-0.070
18REN162C042573.1570.7200.683-0.054
19REN169D012553.7540.6800.7340.073
20REN169O182573.5510.7600.718-0.058
21REN247M232543.8940.7200.7430.031
22REN54P112572.6880.4800.6280.236
23REN64E192572.6710.7200.626-0.151
24VGL07602564.2660.6400.7660.164
25VGL091025118.8650.7600.8870.143
26VGL10632593.9180.7600.745-0.020
27VGL11652594.8640.6800.7940.144
28VGL18282585.1650.8000.8060.008
29VGL20092563.4250.6000.7080.153
30VGL24092583.1650.6000.6840.123
31VGL29182586.0390.7200.8340.137
32VGL30082574.6820.8400.786-0.068
33VGL323525104.8830.7600.7950.044

Biro Biewer

#LocusNNaNeHoHeF
1AHT121332.0000.6670.500-0.333
2AHT137321.8000.6670.444-0.500
3AHTH130332.0000.3330.5000.333
4AHTh171-A332.5710.3330.6110.455
5AHTh260332.5711.0000.611-0.636
6AHTk211321.8000.6670.444-0.500
7AHTk253321.8000.6670.444-0.500
8C22.279321.3850.3330.278-0.200
9FH2001332.0000.6670.500-0.333
10FH2054322.0001.0000.500-1.000
11FH2848322.0001.0000.500-1.000
12INRA21343.6001.0000.722-0.385
13INU005311.0000.0000.0000.000
14INU030332.5710.6670.611-0.091
15INU055321.8000.0000.4441.000
16LEI004321.3850.3330.278-0.200
17REN105L03311.0000.0000.0000.000
18REN162C04333.0000.6670.6670.000
19REN169D01332.0000.6670.500-0.333
20REN169O18311.0000.0000.0000.000
21REN247M23332.5711.0000.611-0.636
22REN54P11343.6000.6670.7220.077
23REN64E19321.8000.0000.4441.000
24VGL0760333.0000.6670.6670.000
25VGL0910343.6001.0000.722-0.385
26VGL1063321.3850.3330.278-0.200
27VGL1165321.3850.3330.278-0.200
28VGL1828343.6000.6670.7220.077
29VGL2009332.5710.6670.611-0.091
30VGL2409332.0000.6670.500-0.333
31VGL2918332.0000.6670.500-0.333
32VGL3008343.6001.0000.722-0.385
33VGL3235332.5711.0000.611-0.636

Standard genetic assessment for 7 STRs in the DLA region

Biewer

#LocusNNaNeHoHeF
1DLA I-3CCA43982.2470.5470.5550.015
2DLA I-4ACA43992.4290.5990.588-0.018
3DLA I-4BCT43963.2750.6920.6950.003
4DLA1131439102.9520.6510.6610.015
55ACA43942.8270.6560.646-0.015
65ACT43952.6410.6100.6210.017
75BCA43951.7850.4400.4400.000

Biewer Yorshire Terrier

#LocusNNaNeHoHeF
1DLA I-3CCA5482.0390.5930.510-0.163
2DLA I-4ACA5473.0610.7410.673-0.100
3DLA I-4BCT5453.4370.6670.7090.060
4DLA11315494.1100.7410.7570.021
55ACA5443.5070.7960.715-0.114
65ACT5453.0360.7220.671-0.077
75BCA5452.3960.6110.583-0.049

Biewer Terrier

#LocusNNaNeHoHeF
1DLA I-3CCA22082.1930.5230.5440.039
2DLA I-4ACA22052.1990.5550.545-0.017
3DLA I-4BCT22053.0170.6820.669-0.020
4DLA113122082.6150.6180.618-0.001
55ACA22042.5320.5950.6050.016
65ACT22042.4750.6050.596-0.014
75BCA22031.6590.3820.3970.039

Yorkshire Terrier

#LocusNNaNeHoHeF
1DLA I-3CCA2563.4720.6000.7120.157
2DLA I-4ACA2582.7900.6000.6420.065
3DLA I-4BCT2553.3970.6000.7060.150
4DLA11312563.4060.6400.7060.094
55ACA2542.5880.6000.6140.022
65ACT2552.3630.2400.5770.584
75BCA2551.8410.3600.4570.212

Biro Biewer

#LocusNNaNeHoHeF
1DLA I-3CCA332.5711.0000.611-0.636
2DLA I-4ACA332.5711.0000.611-0.636
3DLA I-4BCT332.5711.0000.611-0.636
4DLA1131321.3850.3330.278-0.200
55ACA332.5711.0000.611-0.636
65ACT322.0001.0000.500-1.000
75BCA311.0000.0000.0000.000