Statistics and Breed-wide Allele Frequency - Giant Schnauzer

Updated Apr 22, 2024

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Giant Schnauzer (n=335)
1006	387 375 293 180	0.046
1008	386 373 289 182	0.036
1011	376 365 281 180	0.010
1014	375 373 287 178	0.237
1016	382 371 277 178	0.045
1017	386 373 289 178	0.084
1054	382 379 277 184	0.003
1065	380 371 277 181	0.003
1067	376 373 277 178	0.001
1068	380 373 287 181	0.054
1091	381 371 277 181	0.034
1092	376 379 277 181	0.276
1129	382 371 277 181	0.001
1159	395 379 277 181	0.164
1181	381 371 277 182	0.003
1263	394 369 277 180	0.001

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Giant Schnauzer (n=335)
2001	343 324 284	0.006
2003	343 324 282	0.030
2005	339 322 280	0.007
2006	339 325 280	0.149
2007	351 327 280	0.046
2012	345 322 280	0.010
2014	339 322 284	0.004
2017	343 322 280	0.001
2022	339 327 282	0.003
2031	339 322 282	0.040
2033	339 323 282	0.037
2037	341 327 280	0.369
2050	341 327 284	0.143
2053	343 324 280	0.063
2060	343 323 284	0.003
2076	345 322 282	0.001
2083	339 324 282	0.001
2090	339 322 278	0.084

Allele Frequencies

#	Locus Name	Allele	Giant Schnauzer (n=335)
1	AHT121	80	0.118
		92	0.139
		94	0.139
		96	0.001
		98	0.003
		100	0.001
		102	0.315
		104	0.104
		106	0.024
		108	0.087
		110	0.006
		112	0.055
		114	0.007
2	AHT137	131	0.061
		133	0.009
		137	0.003
		141	0.254
		143	0.001
		147	0.663
		149	0.004
		151	0.004
3	AHTH130	117	0.316
		119	0.072
		121	0.155
		125	0.027
		127	0.015
		129	0.146
		131	0.261
		133	0.006
		135	0.001
4	AHTh171-A	219	0.396
		221	0.040
		225	0.242
		227	0.003
		229	0.001
		233	0.273
		235	0.045
5	AHTh260	238	0.184
		240	0.234
		242	0.012
		246	0.485
		248	0.069
		250	0.010
		252	0.006
6	AHTk211	87	0.572
		91	0.252
		93	0.066
		95	0.110
7	AHTk253	284	0.010
		286	0.404
		288	0.161
		290	0.116
		292	0.201
		294	0.106
8	C22.279	116	0.099
		118	0.554
		122	0.025
		124	0.266
		126	0.057
9	FH2001	128	0.190
		132	0.057
		136	0.006
		144	0.378
		148	0.357
		152	0.012
		158	0.001
10	FH2054	144	0.018
		152	0.200
		156	0.303
		160	0.312
		164	0.001
		168	0.118
		172	0.048
11	FH2848	230	0.003
		232	0.031
		234	0.209
		236	0.024
		238	0.109
		240	0.549
		242	0.012
		244	0.063
12	INRA21	95	0.485
		97	0.016
		99	0.013
		101	0.163
		103	0.146
		105	0.176
13	INU005	110	0.004
		122	0.003
		124	0.788
		126	0.113
		128	0.010
		130	0.004
		132	0.076
14	INU030	144	0.231
		146	0.276
		148	0.006
		150	0.203
		152	0.254
		154	0.030
15	INU055	208	0.003
		210	0.469
		214	0.075
		216	0.263
		218	0.167
		220	0.024
16	LEI004	83	0.001
		85	0.094
		95	0.828
		103	0.001
		107	0.075
17	REN105L03	231	0.025
		233	0.918
		235	0.034
		239	0.001
		241	0.021
18	REN162C04	200	0.030
		202	0.281
		204	0.203
		206	0.290
		208	0.197
19	REN169D01	202	0.009
		210	0.004
		212	0.003
		216	0.878
		220	0.052
		222	0.054
20	REN169O18	160	0.146
		162	0.266
		164	0.007
		166	0.142
		168	0.269
		170	0.167
		172	0.003
21	REN247M23	268	0.575
		270	0.188
		272	0.204
		276	0.033
22	REN54P11	222	0.010
		226	0.216
		228	0.040
		232	0.021
		234	0.010
		236	0.445
		238	0.257
23	REN64E19	145	0.406
		147	0.243
		153	0.349
		155	0.001
24	VGL0760	12	0.736
		13	0.013
		14	0.003
		18.2	0.061
		19.2	0.037
		20.2	0.024
		21.2	0.052
		22.2	0.049
		23.2	0.024
25	VGL0910	16	0.052
		16.1	0.010
		17	0.003
		17.1	0.234
		18.1	0.115
		19.1	0.284
		20.1	0.170
		21.1	0.031
		22.1	0.091
		23.1	0.007
		24.1	0.001
26	VGL1063	8	0.001
		9	0.003
		11	0.012
		13	0.224
		14	0.303
		15	0.049
		16	0.034
		17	0.003
		18	0.146
		19	0.031
		20	0.187
		21	0.001
		22	0.004
27	VGL1165	15	0.103
		16	0.151
		17	0.245
		18	0.003
		19	0.122
		21	0.003
		22	0.079
		26	0.055
		27	0.001
		28	0.004
		29	0.187
		30	0.045
		33	0.001
28	VGL1828	14	0.104
		15	0.001
		16	0.130
		17	0.321
		18	0.015
		19	0.099
		20	0.115
		21	0.188
		22	0.003
		23	0.024
29	VGL2009	9	0.006
		11	0.037
		12	0.036
		13	0.597
		14	0.088
		15	0.234
		16	0.001
30	VGL2409	13	0.022
		14	0.022
		15	0.175
		16	0.040
		17	0.116
		18	0.385
		19	0.070
		20	0.163
		21	0.006
31	VGL2918	11	0.003
		12	0.260
		13	0.169
		14	0.076
		15	0.012
		16	0.004
		17.3	0.161
		18.3	0.175
		19.3	0.103
		20.3	0.022
		21.3	0.010
		22.3	0.004
32	VGL3008	10	0.187
		13	0.004
		15	0.118
		16	0.067
		17	0.009
		18	0.170
		19	0.269
		20	0.164
		21	0.012
33	VGL3235	13	0.291
		14	0.449
		15	0.131
		16	0.087
		18	0.042

Standard genetic assessment based on 33 autosomal STR loci

Giant Schnauzer

		N	Na	Ne	Ho	He	F
	Mean	335	7.485	3.521	0.623	0.653	0.054
	SE		0.450	0.247	0.031	0.031	0.011

Standard genetic assessment based on 7 STRs in the DLA region

Giant Schnauzer

		N	Na	Ne	Ho	He	F
	Mean	335	5.571	2.910	0.620	0.630	0.015
	SE		0.566	0.371	0.027	0.030	0.007

Standard genetic assessment for individual STR loci

Giant Schnauzer

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	335	13	5.755	0.761	0.826	0.079
2	AHT137	335	8	1.971	0.493	0.493	0.000
3	AHTH130	335	9	4.547	0.764	0.780	0.020
4	AHTh171-A	335	7	3.411	0.713	0.707	-0.009
5	AHTh260	335	7	3.040	0.707	0.671	-0.054
6	AHTk211	335	4	2.458	0.519	0.593	0.124
7	AHTk253	335	6	3.920	0.701	0.745	0.058
8	C22.279	335	5	2.559	0.558	0.609	0.084
9	FH2001	335	7	3.235	0.603	0.691	0.127
10	FH2054	335	7	4.071	0.761	0.754	-0.009
11	FH2848	335	8	2.756	0.612	0.637	0.040
12	INRA21	335	6	3.178	0.636	0.685	0.072
13	INU005	335	7	1.563	0.328	0.360	0.088
14	INU030	335	6	4.232	0.737	0.764	0.035
15	INU055	335	6	3.099	0.624	0.677	0.079
16	LEI004	335	5	1.427	0.301	0.299	-0.007
17	REN105L03	335	5	1.184	0.137	0.155	0.115
18	REN162C04	335	5	4.107	0.716	0.757	0.053
19	REN169D01	335	6	1.289	0.161	0.224	0.281
20	REN169O18	335	7	4.711	0.755	0.788	0.041
21	REN247M23	335	4	2.448	0.579	0.592	0.021
22	REN54P11	335	7	3.196	0.621	0.687	0.096
23	REN64E19	335	4	2.890	0.639	0.654	0.023
24	VGL0760	335	9	1.808	0.379	0.447	0.152
25	VGL0910	335	11	5.272	0.788	0.810	0.027
26	VGL1063	335	13	4.929	0.743	0.797	0.068
27	VGL1165	335	13	6.477	0.830	0.846	0.019
28	VGL1828	335	10	5.268	0.782	0.810	0.035
29	VGL2009	335	7	2.371	0.546	0.578	0.055
30	VGL2409	335	9	4.417	0.770	0.774	0.004
31	VGL2918	335	12	5.897	0.839	0.830	-0.010
32	VGL3008	335	9	5.508	0.794	0.818	0.030
33	VGL3235	335	5	3.195	0.654	0.687	0.048

Standard genetic assessment for 7 STRs in the DLA region

Giant Schnauzer

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	335	9	5.272	0.788	0.810	0.027
2	DLA I-4ACA	335	6	2.660	0.612	0.624	0.019
3	DLA I-4BCT	335	5	2.597	0.597	0.615	0.029
4	DLA1131	335	5	2.361	0.588	0.576	-0.020
5	5ACA	335	5	2.619	0.615	0.618	0.005
6	5ACT	335	5	2.695	0.603	0.629	0.041
7	5BCA	335	4	2.164	0.537	0.538	0.001

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Giant Schnauzer

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Giant Schnauzer

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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