Statistics and Breed-wide Allele Frequency - Swedish Vallhund

Updated Mar 28, 2024

DLA Class I Haplotype Frequencies

DLA1 #STR typesSwedish Vallhund (n=553)
1006387 375 293 1800.2360
1009382 377 277 1840.0561
1068380 373 287 1810.3562
1177395 373 277 1810.1736
1178386 365 277 1860.1609
1179395 375 293 1800.0027
1259387 373 287 1810.0145

DLA Class II Haplotype Frequencies

DLA2 #STR typesSwedish Vallhund (n=553)
2007351 327 2800.2387
2022339 327 2820.0561
2053343 324 2800.5316
2066339 324 2800.0009
2084339 323 2680.1727

Allele Frequencies

#Locus NameAlleleSwedish Vallhund (n=554)
1AHT121 940.1236
960.3014
980.0713
1000.4296
1020.0695
1060.0045
2AHT137 1310.3267
1330.0208
1350.1236
1370.5244
1390.0018
1470.0027
3AHTH130 1190.1300
1210.0857
1270.0623
1290.0135
1310.0009
1330.0018
1350.7058
4AHTh171-A 2210.6570
2250.1525
2270.0289
2290.0578
2330.1038
5AHTh260 2460.5334
2480.3051
2500.0036
2540.1579
6AHTk211 870.4188
890.1300
910.4513
7AHTk253 2820.1958
2860.0650
2880.3610
2900.0993
2920.1877
2940.0912
8C22.279 1160.3150
1180.0018
1240.6291
1300.0542
9FH2001 1320.2428
1400.0063
1440.6137
1480.0731
1520.0641
10FH2054 1480.1363
1520.1300
1560.6363
1600.0442
1640.0036
1720.0487
1760.0009
11FH2848 2320.1588
2360.0352
2380.1110
2400.6805
2440.0144
12INRA21 950.0379
970.2383
990.0560
1010.6679
13INU005 1220.0478
1240.8989
1260.0532
14INU030 1440.2067
1480.0451
1500.6958
1520.0523
15INU055 2100.2780
2120.0966
2140.3511
2160.2744
16LEI004 850.1354
950.5316
970.0578
1050.1525
1070.1227
17REN105L03 2310.1282
2330.1995
2350.1670
2390.0966
2410.4088
18REN162C04 2000.2356
2020.2789
2040.2103
2060.2717
2100.0036
19REN169D01 2020.2527
2100.1029
2160.1534
2180.4910
20REN169O18 1620.6489
1700.3466
1740.0045
21REN247M23 2680.8664
2720.1336
22REN54P11 2260.8953
2340.0875
2440.0171
23REN64E19 1450.0776
1470.4468
1490.4738
1530.0018
24VGL0760 120.0731
140.1038
150.0036
20.20.2960
21.20.2960
22.20.0072
23.20.0514
24.20.1688
25VGL0910 18.10.0018
19.10.1399
20.10.4549
21.10.3484
22.10.0532
23.10.0018
26VGL1063 80.0199
120.1209
130.1724
140.0912
150.4567
160.0099
190.0307
200.0731
210.0253
27VGL1165 180.0153
200.4395
220.0009
230.2735
240.0280
250.1498
260.0930
28VGL1828 150.0009
160.0487
170.2374
180.0009
190.6101
200.1020
29VGL2009 130.1218
140.0181
150.6606
160.1949
170.0045
30VGL2409 140.2527
150.0018
160.4449
170.2978
180.0018
190.0009
31VGL2918 130.2058
140.6715
150.0397
17.30.0009
18.30.0433
19.30.0361
20.30.0027
32VGL3008 160.2509
170.4919
180.1841
190.0126
200.0605
33VGL3235 140.5993
150.0857
160.0081
170.0126
180.2942

Standard genetic assessment based on 33 autosomal STR loci

Swedish Vallhund

  NNaNeHoHeF
Mean5545.0912.5900.5650.5690.010
 SE 0.2690.1470.0260.0260.007

Standard genetic assessment based on 7 STRs in the DLA region

Swedish Vallhund

  NNaNeHoHeF
Mean5543.5712.6790.6230.603-0.034
 SE 0.2750.2490.0420.0400.009

Standard genetic assessment for individual STR loci

Swedish Vallhund

#LocusNNaNeHoHeF
1AHT12155463.3260.6660.6990.048
2AHT13755462.5160.5610.6030.068
3AHTH13055471.9000.5040.474-0.063
4AHTh171-A55452.1280.5360.530-0.011
5AHTh26055442.4840.5990.597-0.003
6AHTk21155432.5260.6140.604-0.016
7AHTk25355464.4190.7980.774-0.031
8C22.27955442.0090.4770.5020.051
9FH200155452.2470.5430.5550.021
10FH205455472.2490.5970.555-0.076
11FH284855451.9920.4960.4980.003
12INRA2155441.9710.4950.493-0.004
13INU00555431.2300.1730.1870.072
14INU03055441.8810.4750.468-0.014
15INU05555443.5070.6950.7150.028
16LEI00455452.9190.6210.6570.055
17REN105L0355453.8380.7690.739-0.040
18REN162C0455453.9790.7170.7490.043
19REN169D0155442.9490.6350.6610.039
20REN169O1855431.8480.4400.4590.040
21REN247M2355421.3010.2310.2310.002
22REN54P1155431.2350.1840.1900.033
23REN64E1955442.3250.5900.570-0.036
24VGL076055484.4930.7710.7770.009
25VGL091055462.8520.6250.6490.038
26VGL106355493.7230.7380.731-0.009
27VGL116555473.3320.7220.700-0.032
28VGL182855462.2660.5470.5590.021
29VGL200955452.0420.5230.510-0.026
30VGL240955462.8530.6370.6490.019
31VGL291855472.0080.4960.5020.011
32VGL300855452.9190.6660.657-0.013
33VGL323555452.2060.4950.5470.095

Standard genetic assessment for 7 STRs in the DLA region

Swedish Vallhund

#LocusNNaNeHoHeF
1DLA I-3CCA55454.0030.7870.750-0.049
2DLA I-4ACA55442.6120.6190.617-0.003
3DLA I-4BCT55432.8810.6990.653-0.070
4DLA113155442.6120.6190.617-0.003
55ACA55432.5490.6260.608-0.031
65ACT55432.4990.6170.600-0.029
75BCA55431.5940.3920.373-0.051