Statistics and Breed-wide Allele Frequency - Cardigan Welsh Corgi

Updated Dec 1, 2022

DLA Class I Haplotype Frequencies

DLA1 #STR typesCardigan Welsh Corgi (n=43)
1012388 369 289 1880.23
1033382 379 277 1810.08
1045376 371 277 1860.33
1066376 375 277 1780.12
1104386 373 289 1860.19
1207386 371 277 1860.05
1208386 373 277 1810.01

DLA Class II Haplotype Frequencies

DLA2 #STR typesCardigan Welsh Corgi (n=43)
2003343 324 2820.23
2007351 327 2800.12
2017343 322 2800.19
2035341 323 2800.08
2039345 327 2760.31
2040345 327 2800.06
2065339 325 2860.01

Allele Frequencies

#Locus NameAlleleCardigan Welsh Corgi (n=43)
1AHT121 920.29
940.08
980.16
1000.17
1020.01
1040.03
1060.23
1120.01
2AHT137 1310.24
1330.07
1370.01
1430.07
1470.13
1490.13
1510.35
3AHTH130 1170.02
1190.07
1270.10
1290.50
1310.30
4AHTh171-A 2190.20
2210.31
2250.28
2310.02
2330.10
2370.08
5AHTh260 2380.40
2400.12
2420.13
2460.10
2480.02
2500.21
2540.02
6AHTk211 870.20
890.13
910.65
970.02
7AHTk253 2840.01
2860.20
2880.08
2900.66
2920.05
8C22.279 1160.02
1180.20
1200.34
1220.20
1240.24
9FH2001 1320.31
1360.10
1440.29
1480.19
1520.10
10FH2054 1520.24
1560.48
1600.20
1640.01
1720.07
11FH2848 2320.01
2340.07
2360.07
2380.01
2400.83
2420.01
12INRA21 910.28
950.44
970.10
1010.14
1050.03
13INU005 1100.19
1240.36
1260.15
1300.19
1320.12
14INU030 1440.55
1480.23
1500.13
1520.09
15INU055 2100.70
2160.01
2180.29
16LEI004 850.24
950.69
1090.07
17REN105L03 2290.06
2310.09
2350.28
2370.12
2390.07
2410.17
2450.21
18REN162C04 2020.20
2040.70
2060.02
2080.08
19REN169D01 2020.13
2100.23
2120.38
2160.22
2200.03
20REN169O18 1560.01
1600.44
1620.05
1640.14
1660.01
1680.33
1700.02
21REN247M23 2660.56
2680.14
2720.27
2780.03
22REN54P11 2260.15
2320.02
2340.23
2360.24
2380.34
2400.01
23REN64E19 1390.02
1430.05
1450.10
1470.15
1490.17
1530.35
1550.15
24VGL0760 130.14
140.29
150.10
18.20.05
19.20.06
22.20.08
23.20.27
24.20.01
25VGL0910 120.08
17.10.13
18.10.56
19.10.12
20.10.05
21.10.02
22.10.05
26VGL1063 90.06
140.48
150.02
180.02
190.01
200.33
210.08
27VGL1165 190.06
200.05
210.36
240.30
250.02
260.15
280.05
300.01
28VGL1828 160.09
180.03
190.57
210.09
220.17
280.03
29VGL2009 130.97
140.02
150.01
30VGL2409 130.01
150.01
160.27
170.56
180.14
190.01
31VGL2918 120.36
130.48
140.05
18.30.12
32VGL3008 140.03
150.03
160.31
170.48
180.14
33VGL3235 130.10
140.48
150.02
160.19
170.20
180.01

Standard genetic assessment based on 33 autosomal STR loci

Cardigan Welsh Corgi

  NNaNeHoHeF
Mean435.5453.2180.6170.6410.040
 SE 0.2500.1910.0290.0270.016

Standard genetic assessment based on 7 STRs in the DLA region

Cardigan Welsh Corgi

  NNaNeHoHeF
Mean434.1432.9330.6250.6450.029
 SE 0.3740.2140.0270.0280.021

Standard genetic assessment for individual STR loci

Cardigan Welsh Corgi

#LocusNNaNeHoHeF
1AHT1214384.9110.8600.796-0.080
2AHT1374374.4660.6280.7760.191
3AHTH1304352.7950.6050.6420.059
4AHTh171-A4364.2800.8140.766-0.062
5AHTh2604374.1320.7210.7580.049
6AHTk2114342.0830.5120.5200.016
7AHTk2534352.0520.5350.513-0.043
8C22.2794353.9680.7440.7480.005
9FH20014354.1740.8140.760-0.070
10FH20544353.0210.7440.669-0.112
11FH28484361.4460.2790.3080.095
12INRA214353.2810.6510.6950.063
13INU0054354.2460.6740.7640.118
14INU0304342.6470.5580.6220.103
15INU0554331.7500.4190.4290.023
16LEI0044331.8690.4420.4650.049
17REN105L034375.4790.6980.8170.147
18REN162C044341.8760.3260.4670.303
19REN169D014353.7350.7210.7320.016
20REN169O184373.0890.6740.6760.003
21REN247M234342.4770.4650.5960.220
22REN54P114363.9850.8140.749-0.087
23REN64E194374.7290.8140.789-0.032
24VGL07604385.0310.6740.8010.158
25VGL09104372.8340.6050.6470.066
26VGL10634372.9030.6280.6550.042
27VGL11654383.9590.7670.747-0.027
28VGL18284362.6680.6280.625-0.004
29VGL20094331.0730.0700.068-0.028
30VGL24094362.4820.5810.5970.026
31VGL29184342.6820.6510.627-0.038
32VGL30084352.8760.6510.6520.002
33VGL32354363.1990.5810.6870.154

Standard genetic assessment for 7 STRs in the DLA region

Cardigan Welsh Corgi

#LocusNNaNeHoHeF
1DLA I-3CCA4343.1690.6740.6840.015
2DLA I-4ACA4353.9720.7210.7480.037
3DLA I-4BCT4321.9480.5120.487-0.051
4DLA11314342.5790.5580.6120.088
55ACA4352.9940.6050.6660.092
65ACT4352.9940.6980.666-0.048
75BCA4342.8730.6050.6520.073