Statistics and Breed-wide Allele Frequency - Cardigan Welsh Corgi

Updated Nov 12, 2024

DLA Class I Haplotype Frequencies

DLA1 #STR typesCardigan Welsh Corgi (n=44)
1012388 369 289 1880.23
1033382 379 277 1810.08
1045376 371 277 1860.33
1066376 375 277 1780.11
1104386 373 289 1860.19
1207386 371 277 1860.05
1208386 373 277 1810.01

DLA Class II Haplotype Frequencies

DLA2 #STR typesCardigan Welsh Corgi (n=44)
2003343 324 2820.23
2007351 327 2800.11
2017343 322 2800.19
2035341 323 2800.08
2039345 327 2760.32
2040345 327 2800.06
2065339 325 2860.01

Allele Frequencies

#Locus NameAlleleCardigan Welsh Corgi (n=44)
1AHT121 920.28
940.08
980.16
1000.18
1020.01
1040.03
1060.24
1120.01
2AHT137 1310.24
1330.07
1370.01
1430.07
1470.14
1490.13
1510.35
3AHTH130 1170.02
1190.07
1270.10
1290.49
1310.32
4AHTh171-A 2190.19
2210.31
2250.28
2310.02
2330.10
2370.09
5AHTh260 2380.40
2400.13
2420.13
2460.10
2480.02
2500.20
2540.02
6AHTk211 870.19
890.13
910.66
970.02
7AHTk253 2840.01
2860.22
2880.08
2900.65
2920.05
8C22.279 1160.02
1180.20
1200.33
1220.19
1240.25
9FH2001 1320.31
1360.10
1440.30
1480.19
1520.10
10FH2054 1520.24
1560.48
1600.20
1640.01
1720.07
11FH2848 2320.01
2340.08
2360.07
2380.01
2400.82
2420.01
12INRA21 910.27
950.45
970.10
1010.14
1050.03
13INU005 1100.18
1240.36
1260.15
1300.19
1320.11
14INU030 1440.55
1480.23
1500.13
1520.10
15INU055 2100.69
2160.01
2180.30
16LEI004 850.24
950.69
1090.07
17REN105L03 2290.06
2310.09
2350.27
2370.13
2390.07
2410.17
2450.22
18REN162C04 2020.20
2040.69
2060.02
2080.08
19REN169D01 2020.14
2100.23
2120.38
2160.23
2200.03
20REN169O18 1560.01
1600.44
1620.06
1640.14
1660.01
1680.32
1700.02
21REN247M23 2660.57
2680.14
2720.26
2780.03
22REN54P11 2260.15
2320.02
2340.23
2360.24
2380.35
2400.01
23REN64E19 1390.02
1430.05
1450.10
1470.16
1490.17
1530.34
1550.16
24VGL0760 130.14
140.28
150.10
18.20.05
19.20.07
22.20.08
23.20.27
24.20.01
25VGL0910 120.08
17.10.13
18.10.57
19.10.11
20.10.05
21.10.02
22.10.05
26VGL1063 90.06
140.49
150.02
180.02
190.01
200.32
210.08
27VGL1165 190.06
200.05
210.38
240.30
250.02
260.15
280.05
300.01
28VGL1828 160.10
180.03
190.57
210.09
220.17
280.03
29VGL2009 130.97
140.02
150.01
30VGL2409 130.01
150.01
160.26
170.57
180.14
190.01
31VGL2918 120.35
130.48
140.05
18.30.13
32VGL3008 140.03
150.03
160.32
170.48
180.14
33VGL3235 130.10
140.48
150.02
160.19
170.19
180.01

Standard genetic assessment based on 33 autosomal STR loci

Cardigan Welsh Corgi

  NNaNeHoHeF
Mean445.5453.2140.6170.6410.039
 SE 0.2500.1920.0290.0270.016

Standard genetic assessment based on 7 STRs in the DLA region

Cardigan Welsh Corgi

  NNaNeHoHeF
Mean444.1432.9150.6300.6430.018
 SE 0.3740.2130.0270.0280.023

Standard genetic assessment for individual STR loci

Cardigan Welsh Corgi

#LocusNNaNeHoHeF
1AHT1214484.9070.8640.796-0.085
2AHT1374474.4510.6360.7750.179
3AHTH1304452.8120.5910.6440.083
4AHTh171-A4464.3210.8180.769-0.065
5AHTh2604474.1190.7270.7570.040
6AHTk2114442.0500.5000.5120.024
7AHTk2534452.1070.5230.5250.005
8C22.2794453.9880.7500.749-0.001
9FH20014454.1720.8180.760-0.076
10FH20544453.0180.7500.669-0.122
11FH28484461.4690.2950.3190.074
12INRA214453.2130.6360.6890.076
13INU0054454.2130.6820.7630.106
14INU0304442.6650.5680.6250.091
15INU0554431.7610.4320.4320.001
16LEI0044431.8450.4320.4580.057
17REN105L034475.5000.7050.8180.139
18REN162C044441.8900.3410.4710.276
19REN169D014453.7920.7270.7360.012
20REN169O184473.1230.6820.680-0.003
21REN247M234442.4340.4550.5890.228
22REN54P114463.9190.7950.745-0.068
23REN64E194474.7860.8180.791-0.034
24VGL07604485.0680.6820.8030.151
25VGL09104472.7600.5910.6380.073
26VGL10634472.8510.6140.6490.055
27VGL11654483.8800.7500.742-0.010
28VGL18284462.6810.6360.627-0.015
29VGL20094431.0710.0680.066-0.027
30VGL24094462.4380.5680.5900.037
31VGL29184442.7060.6590.630-0.045
32VGL30084452.8580.6590.650-0.014
33VGL32354463.1890.5910.6860.139

Standard genetic assessment for 7 STRs in the DLA region

Cardigan Welsh Corgi

#LocusNNaNeHoHeF
1DLA I-3CCA4443.1560.6820.6830.002
2DLA I-4ACA4453.9470.7270.7470.026
3DLA I-4BCT4421.9510.5230.487-0.073
4DLA11314442.5270.5450.6040.097
55ACA4452.9690.6140.6630.075
65ACT4452.9920.7050.666-0.058
75BCA4442.8620.6140.6510.057