Statistics and Breed-wide Allele Frequency - Cardigan Welsh Corgi

Updated Nov 21, 2024

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Cardigan Welsh Corgi (n=44)
1012	388 369 289 188	0.23
1033	382 379 277 181	0.08
1045	376 371 277 186	0.33
1066	376 375 277 178	0.11
1104	386 373 289 186	0.19
1207	386 371 277 186	0.05
1208	386 373 277 181	0.01

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Cardigan Welsh Corgi (n=44)
2003	343 324 282	0.23
2007	351 327 280	0.11
2017	343 322 280	0.19
2035	341 323 280	0.08
2039	345 327 276	0.32
2040	345 327 280	0.06
2065	339 325 286	0.01

Allele Frequencies

#	Locus Name	Allele	Cardigan Welsh Corgi (n=44)
1	AHT121	92	0.28
		94	0.08
		98	0.16
		100	0.18
		102	0.01
		104	0.03
		106	0.24
		112	0.01
2	AHT137	131	0.24
		133	0.07
		137	0.01
		143	0.07
		147	0.14
		149	0.13
		151	0.35
3	AHTH130	117	0.02
		119	0.07
		127	0.10
		129	0.49
		131	0.32
4	AHTh171-A	219	0.19
		221	0.31
		225	0.28
		231	0.02
		233	0.10
		237	0.09
5	AHTh260	238	0.40
		240	0.13
		242	0.13
		246	0.10
		248	0.02
		250	0.20
		254	0.02
6	AHTk211	87	0.19
		89	0.13
		91	0.66
		97	0.02
7	AHTk253	284	0.01
		286	0.22
		288	0.08
		290	0.65
		292	0.05
8	C22.279	116	0.02
		118	0.20
		120	0.33
		122	0.19
		124	0.25
9	FH2001	132	0.31
		136	0.10
		144	0.30
		148	0.19
		152	0.10
10	FH2054	152	0.24
		156	0.48
		160	0.20
		164	0.01
		172	0.07
11	FH2848	232	0.01
		234	0.08
		236	0.07
		238	0.01
		240	0.82
		242	0.01
12	INRA21	91	0.27
		95	0.45
		97	0.10
		101	0.14
		105	0.03
13	INU005	110	0.18
		124	0.36
		126	0.15
		130	0.19
		132	0.11
14	INU030	144	0.55
		148	0.23
		150	0.13
		152	0.10
15	INU055	210	0.69
		216	0.01
		218	0.30
16	LEI004	85	0.24
		95	0.69
		109	0.07
17	REN105L03	229	0.06
		231	0.09
		235	0.27
		237	0.13
		239	0.07
		241	0.17
		245	0.22
18	REN162C04	202	0.20
		204	0.69
		206	0.02
		208	0.08
19	REN169D01	202	0.14
		210	0.23
		212	0.38
		216	0.23
		220	0.03
20	REN169O18	156	0.01
		160	0.44
		162	0.06
		164	0.14
		166	0.01
		168	0.32
		170	0.02
21	REN247M23	266	0.57
		268	0.14
		272	0.26
		278	0.03
22	REN54P11	226	0.15
		232	0.02
		234	0.23
		236	0.24
		238	0.35
		240	0.01
23	REN64E19	139	0.02
		143	0.05
		145	0.10
		147	0.16
		149	0.17
		153	0.34
		155	0.16
24	VGL0760	13	0.14
		14	0.28
		15	0.10
		18.2	0.05
		19.2	0.07
		22.2	0.08
		23.2	0.27
		24.2	0.01
25	VGL0910	12	0.08
		17.1	0.13
		18.1	0.57
		19.1	0.11
		20.1	0.05
		21.1	0.02
		22.1	0.05
26	VGL1063	9	0.06
		14	0.49
		15	0.02
		18	0.02
		19	0.01
		20	0.32
		21	0.08
27	VGL1165	19	0.06
		20	0.05
		21	0.38
		24	0.30
		25	0.02
		26	0.15
		28	0.05
		30	0.01
28	VGL1828	16	0.10
		18	0.03
		19	0.57
		21	0.09
		22	0.17
		28	0.03
29	VGL2009	13	0.97
		14	0.02
		15	0.01
30	VGL2409	13	0.01
		15	0.01
		16	0.26
		17	0.57
		18	0.14
		19	0.01
31	VGL2918	12	0.35
		13	0.48
		14	0.05
		18.3	0.13
32	VGL3008	14	0.03
		15	0.03
		16	0.32
		17	0.48
		18	0.14
33	VGL3235	13	0.10
		14	0.48
		15	0.02
		16	0.19
		17	0.19
		18	0.01

Standard genetic assessment based on 33 autosomal STR loci

Cardigan Welsh Corgi

		N	Na	Ne	Ho	He	F
	Mean	44	5.545	3.214	0.617	0.641	0.039
	SE		0.250	0.192	0.029	0.027	0.016

Standard genetic assessment based on 7 STRs in the DLA region

Cardigan Welsh Corgi

		N	Na	Ne	Ho	He	F
	Mean	44	4.143	2.915	0.630	0.643	0.018
	SE		0.374	0.213	0.027	0.028	0.023

Standard genetic assessment for individual STR loci

Cardigan Welsh Corgi

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	44	8	4.907	0.864	0.796	-0.085
2	AHT137	44	7	4.451	0.636	0.775	0.179
3	AHTH130	44	5	2.812	0.591	0.644	0.083
4	AHTh171-A	44	6	4.321	0.818	0.769	-0.065
5	AHTh260	44	7	4.119	0.727	0.757	0.040
6	AHTk211	44	4	2.050	0.500	0.512	0.024
7	AHTk253	44	5	2.107	0.523	0.525	0.005
8	C22.279	44	5	3.988	0.750	0.749	-0.001
9	FH2001	44	5	4.172	0.818	0.760	-0.076
10	FH2054	44	5	3.018	0.750	0.669	-0.122
11	FH2848	44	6	1.469	0.295	0.319	0.074
12	INRA21	44	5	3.213	0.636	0.689	0.076
13	INU005	44	5	4.213	0.682	0.763	0.106
14	INU030	44	4	2.665	0.568	0.625	0.091
15	INU055	44	3	1.761	0.432	0.432	0.001
16	LEI004	44	3	1.845	0.432	0.458	0.057
17	REN105L03	44	7	5.500	0.705	0.818	0.139
18	REN162C04	44	4	1.890	0.341	0.471	0.276
19	REN169D01	44	5	3.792	0.727	0.736	0.012
20	REN169O18	44	7	3.123	0.682	0.680	-0.003
21	REN247M23	44	4	2.434	0.455	0.589	0.228
22	REN54P11	44	6	3.919	0.795	0.745	-0.068
23	REN64E19	44	7	4.786	0.818	0.791	-0.034
24	VGL0760	44	8	5.068	0.682	0.803	0.151
25	VGL0910	44	7	2.760	0.591	0.638	0.073
26	VGL1063	44	7	2.851	0.614	0.649	0.055
27	VGL1165	44	8	3.880	0.750	0.742	-0.010
28	VGL1828	44	6	2.681	0.636	0.627	-0.015
29	VGL2009	44	3	1.071	0.068	0.066	-0.027
30	VGL2409	44	6	2.438	0.568	0.590	0.037
31	VGL2918	44	4	2.706	0.659	0.630	-0.045
32	VGL3008	44	5	2.858	0.659	0.650	-0.014
33	VGL3235	44	6	3.189	0.591	0.686	0.139

Standard genetic assessment for 7 STRs in the DLA region

Cardigan Welsh Corgi

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	44	4	3.156	0.682	0.683	0.002
2	DLA I-4ACA	44	5	3.947	0.727	0.747	0.026
3	DLA I-4BCT	44	2	1.951	0.523	0.487	-0.073
4	DLA1131	44	4	2.527	0.545	0.604	0.097
5	5ACA	44	5	2.969	0.614	0.663	0.075
6	5ACT	44	5	2.992	0.705	0.666	-0.058
7	5BCA	44	4	2.862	0.614	0.651	0.057

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Cardigan Welsh Corgi

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Cardigan Welsh Corgi

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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