Statistics and Breed-wide Allele Frequency - Great Dane

Updated Jul 1, 2025

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Great Dane (n=112)
1006	387 375 293 180	0.009
1009	382 377 277 184	0.071
1016	382 371 277 178	0.192
1030	380 373 293 178	0.246
1066	376 375 277 178	0.214
1068	380 373 287 181	0.027
1091	381 371 277 181	0.049
1094	395 375 277 176	0.058
1129	382 371 277 181	0.085
1273	376 375 277 176	0.004
1274	385 371 277 181	0.004
1275	387 371 277 181	0.013
1276	392 373 281 182	0.013
1277	394 369 277 183	0.004
1278	399 373 277 181	0.009

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Great Dane (n=112)
2003	343 324 282	0.004
2005	339 322 280	0.071
2007	351 327 280	0.009
2014	339 322 284	0.036
2022	339 327 282	0.071
2023	341 323 282	0.246
2033	339 323 282	0.156
2046	339 329 280	0.357
2053	343 324 280	0.027
2086	339 329 284	0.009
2136	353 324 280	0.013

Allele Frequencies

#	Locus Name	Allele	Great Dane (n=113)
1	AHT121	80	0.022
		94	0.067
		98	0.344
		100	0.004
		102	0.022
		104	0.013
		106	0.103
		108	0.009
		110	0.040
		112	0.022
		114	0.254
		118	0.098
2	AHT137	129	0.004
		131	0.128
		133	0.022
		137	0.075
		141	0.181
		147	0.584
		151	0.004
3	AHTH130	117	0.013
		119	0.134
		121	0.219
		123	0.027
		125	0.004
		127	0.388
		131	0.058
		133	0.156
4	AHTh171-A	219	0.335
		221	0.013
		225	0.027
		227	0.170
		229	0.201
		233	0.121
		235	0.125
		237	0.009
5	AHTh260	238	0.009
		242	0.018
		244	0.272
		246	0.567
		248	0.089
		250	0.040
		254	0.004
6	AHTk211	87	0.013
		89	0.327
		91	0.394
		95	0.265
7	AHTk253	286	0.223
		288	0.531
		290	0.228
		292	0.018
8	C22.279	116	0.031
		118	0.629
		120	0.071
		122	0.031
		124	0.237
9	FH2001	128	0.004
		132	0.179
		136	0.031
		144	0.589
		148	0.147
		152	0.036
		158	0.013
10	FH2054	148	0.013
		152	0.004
		156	0.442
		160	0.286
		164	0.156
		168	0.058
		172	0.018
		176	0.022
11	FH2848	232	0.036
		234	0.714
		238	0.183
		240	0.054
		242	0.013
12	INRA21	91	0.054
		95	0.353
		99	0.330
		101	0.210
		103	0.027
		105	0.027
13	INU005	110	0.018
		122	0.058
		124	0.326
		126	0.580
		132	0.018
14	INU030	144	0.036
		146	0.004
		150	0.696
		152	0.263
15	INU055	204	0.018
		208	0.063
		210	0.143
		212	0.295
		216	0.357
		218	0.125
16	LEI004	85	0.161
		95	0.679
		97	0.116
		107	0.009
		111	0.036
17	REN105L03	227	0.075
		231	0.186
		233	0.075
		235	0.540
		241	0.049
		245	0.075
18	REN162C04	192	0.063
		194	0.004
		202	0.237
		204	0.085
		206	0.147
		208	0.464
19	REN169D01	202	0.027
		212	0.221
		216	0.465
		220	0.288
20	REN169O18	164	0.027
		166	0.098
		168	0.433
		170	0.438
		172	0.004
21	REN247M23	268	0.177
		272	0.814
		278	0.009
22	REN54P11	222	0.004
		226	0.134
		228	0.156
		232	0.036
		234	0.192
		236	0.004
		238	0.473
23	REN64E19	139	0.170
		143	0.116
		145	0.125
		147	0.147
		149	0.366
		153	0.076
24	VGL0760	12	0.156
		13	0.013
		19.2	0.054
		20.2	0.045
		21.2	0.036
		22.2	0.214
		23.2	0.210
		24.2	0.250
		25.2	0.022
25	VGL0910	12	0.013
		14	0.040
		17.1	0.009
		18.1	0.013
		19	0.004
		19.1	0.045
		20.1	0.326
		21.1	0.384
		22.1	0.107
		23.1	0.027
		24.1	0.031
26	VGL1063	12	0.004
		13	0.049
		14	0.357
		15	0.469
		16	0.036
		17	0.045
		18	0.031
		19	0.009
27	VGL1165	15	0.013
		18	0.031
		19	0.027
		21	0.013
		22	0.004
		25	0.004
		26	0.205
		27	0.513
		28	0.040
		29	0.129
		30	0.013
		31	0.004
28	VGL1828	14	0.018
		15	0.058
		16	0.415
		17	0.067
		19	0.129
		20	0.143
		21	0.022
		22	0.147
29	VGL2009	9	0.268
		13	0.009
		14	0.027
		15	0.656
		16	0.040
30	VGL2409	13	0.179
		14	0.022
		15	0.094
		16	0.045
		17	0.348
		18	0.272
		19	0.040
31	VGL2918	11	0.009
		12	0.018
		13	0.692
		14	0.103
		15	0.027
		16	0.031
		18.3	0.040
		19.3	0.040
		20.3	0.004
		21.3	0.036
32	VGL3008	13	0.098
		14	0.027
		15	0.018
		16	0.138
		17	0.254
		18	0.308
		19	0.080
		20	0.036
		21	0.040
33	VGL3235	12	0.268
		13	0.045
		14	0.607
		15	0.027
		16	0.004
		17	0.013
		18	0.036

Standard genetic assessment based on 33 autosomal STR loci

Great Dane

		N	Na	Ne	Ho	He	F
	Mean	113	6.788	3.119	0.592	0.642	0.079
	SE		0.392	0.179	0.023	0.021	0.016

Standard genetic assessment based on 7 STRs in the DLA region

Great Dane

		N	Na	Ne	Ho	He	F
	Mean	113	5.571	2.643	0.552	0.586	0.055
	SE		0.805	0.309	0.042	0.045	0.020

Standard genetic assessment for individual STR loci

Great Dane

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	113	12	4.740	0.830	0.789	-0.052
2	AHT137	113	7	2.521	0.522	0.603	0.135
3	AHTH130	113	8	4.076	0.563	0.755	0.255
4	AHTh171-A	113	8	4.709	0.714	0.788	0.093
5	AHTh260	113	7	2.465	0.482	0.594	0.189
6	AHTk211	113	4	3.003	0.646	0.667	0.032
7	AHTk253	113	4	2.603	0.616	0.616	-0.000
8	C22.279	113	5	2.177	0.509	0.541	0.059
9	FH2001	113	7	2.480	0.518	0.597	0.132
10	FH2054	113	8	3.270	0.688	0.694	0.010
11	FH2848	113	5	1.825	0.375	0.452	0.170
12	INRA21	113	6	3.548	0.696	0.718	0.030
13	INU005	113	5	2.237	0.491	0.553	0.112
14	INU030	113	4	1.800	0.491	0.444	-0.105
15	INU055	113	6	3.927	0.759	0.745	-0.018
16	LEI004	113	5	1.996	0.420	0.499	0.159
17	REN105L03	113	6	2.896	0.558	0.655	0.148
18	REN162C04	113	6	3.285	0.679	0.696	0.025
19	REN169D01	113	4	2.872	0.460	0.652	0.294
20	REN169O18	113	5	2.569	0.598	0.611	0.020
21	REN247M23	113	3	1.440	0.265	0.306	0.132
22	REN54P11	113	7	3.285	0.661	0.696	0.050
23	REN64E19	113	6	4.559	0.732	0.781	0.062
24	VGL0760	113	9	5.444	0.759	0.816	0.070
25	VGL0910	113	11	3.692	0.643	0.729	0.118
26	VGL1063	113	8	2.825	0.464	0.646	0.281
27	VGL1165	113	12	3.064	0.625	0.674	0.072
28	VGL1828	113	8	4.168	0.741	0.760	0.025
29	VGL2009	113	5	1.981	0.491	0.495	0.008
30	VGL2409	113	7	4.163	0.705	0.760	0.072
31	VGL2918	113	10	2.016	0.473	0.504	0.061
32	VGL3008	113	9	5.030	0.821	0.801	-0.025
33	VGL3235	113	7	2.249	0.554	0.555	0.003

Standard genetic assessment for 7 STRs in the DLA region

Great Dane

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	113	10	4.003	0.652	0.750	0.131
2	DLA I-4ACA	113	5	3.428	0.652	0.708	0.080
3	DLA I-4BCT	113	4	1.776	0.411	0.437	0.060
4	DLA1131	113	7	2.131	0.473	0.531	0.108
5	5ACA	113	5	1.809	0.429	0.447	0.042
6	5ACT	113	5	3.171	0.705	0.685	-0.030
7	5BCA	113	3	2.182	0.545	0.542	-0.006

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Great Dane

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Great Dane

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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