Statistics and Breed-wide Allele Frequency - Great Dane

Updated Feb 22, 2025

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Great Dane (n=96)
1006	387 375 293 180	0.010
1009	382 377 277 184	0.078
1016	382 371 277 178	0.198
1030	380 373 293 178	0.266
1066	376 375 277 178	0.208
1068	380 373 287 181	0.021
1091	381 371 277 181	0.047
1094	395 375 277 176	0.042
1129	382 371 277 181	0.073
1273	376 375 277 176	0.005
1274	385 371 277 181	0.005
1275	387 371 277 181	0.016
1276	392 373 281 182	0.016
1277	394 369 277 183	0.005
1278	399 373 277 181	0.010

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Great Dane (n=96)
2003	343 324 282	0.005
2005	339 322 280	0.057
2007	351 327 280	0.010
2014	339 322 284	0.042
2022	339 327 282	0.078
2023	341 323 282	0.266
2033	339 323 282	0.146
2046	339 329 280	0.349
2053	343 324 280	0.021
2086	339 329 284	0.010
2136	353 324 280	0.016

Allele Frequencies

#	Locus Name	Allele	Great Dane (n=96)
1	AHT121	80	0.026
		94	0.073
		98	0.313
		100	0.005
		102	0.026
		104	0.005
		106	0.104
		108	0.010
		110	0.047
		112	0.026
		114	0.260
		118	0.104
2	AHT137	129	0.005
		131	0.130
		133	0.026
		137	0.078
		141	0.182
		147	0.573
		151	0.005
3	AHTH130	117	0.016
		119	0.130
		121	0.177
		123	0.031
		125	0.005
		127	0.401
		131	0.063
		133	0.177
4	AHTh171-A	219	0.328
		221	0.016
		225	0.026
		227	0.172
		229	0.198
		233	0.135
		235	0.120
		237	0.005
5	AHTh260	238	0.010
		242	0.021
		244	0.281
		246	0.573
		248	0.068
		250	0.042
		254	0.005
6	AHTk211	87	0.016
		89	0.302
		91	0.391
		95	0.292
7	AHTk253	286	0.219
		288	0.505
		290	0.255
		292	0.021
8	C22.279	116	0.036
		118	0.615
		120	0.083
		122	0.036
		124	0.229
9	FH2001	128	0.005
		132	0.208
		136	0.036
		144	0.552
		148	0.146
		152	0.042
		158	0.010
10	FH2054	148	0.016
		152	0.005
		156	0.453
		160	0.250
		164	0.161
		168	0.068
		172	0.021
		176	0.026
11	FH2848	232	0.042
		234	0.698
		238	0.182
		240	0.063
		242	0.016
12	INRA21	91	0.042
		95	0.375
		99	0.344
		101	0.208
		103	0.005
		105	0.026
13	INU005	110	0.016
		122	0.068
		124	0.333
		126	0.568
		132	0.016
14	INU030	144	0.036
		146	0.005
		150	0.667
		152	0.292
15	INU055	204	0.021
		208	0.073
		210	0.151
		212	0.297
		216	0.323
		218	0.135
16	LEI004	85	0.141
		95	0.708
		97	0.099
		107	0.010
		111	0.042
17	REN105L03	227	0.063
		231	0.214
		233	0.068
		235	0.516
		241	0.057
		245	0.083
18	REN162C04	192	0.063
		194	0.005
		202	0.260
		204	0.083
		206	0.125
		208	0.464
19	REN169D01	202	0.026
		212	0.219
		216	0.479
		220	0.276
20	REN169O18	164	0.031
		166	0.104
		168	0.458
		170	0.401
		172	0.005
21	REN247M23	268	0.177
		272	0.818
		278	0.005
22	REN54P11	222	0.005
		226	0.151
		228	0.125
		232	0.036
		234	0.203
		236	0.005
		238	0.474
23	REN64E19	139	0.161
		143	0.120
		145	0.120
		147	0.141
		149	0.375
		153	0.083
24	VGL0760	12	0.151
		13	0.016
		19.2	0.063
		20.2	0.042
		21.2	0.031
		22.2	0.193
		23.2	0.234
		24.2	0.245
		25.2	0.026
25	VGL0910	12	0.016
		14	0.042
		17.1	0.010
		18.1	0.016
		19	0.005
		19.1	0.052
		20.1	0.318
		21.1	0.396
		22.1	0.099
		23.1	0.031
		24.1	0.016
26	VGL1063	12	0.005
		13	0.057
		14	0.385
		15	0.443
		16	0.042
		17	0.042
		18	0.016
		19	0.010
27	VGL1165	15	0.005
		18	0.036
		19	0.031
		21	0.016
		22	0.005
		25	0.005
		26	0.172
		27	0.573
		28	0.036
		29	0.109
		30	0.005
		31	0.005
28	VGL1828	14	0.021
		15	0.068
		16	0.391
		17	0.063
		19	0.141
		20	0.135
		21	0.026
		22	0.156
29	VGL2009	9	0.266
		13	0.010
		14	0.026
		15	0.661
		16	0.036
30	VGL2409	13	0.193
		14	0.010
		15	0.099
		16	0.052
		17	0.339
		18	0.271
		19	0.036
31	VGL2918	11	0.010
		12	0.021
		13	0.672
		14	0.104
		15	0.031
		16	0.036
		18.3	0.047
		19.3	0.042
		21.3	0.036
32	VGL3008	13	0.073
		14	0.031
		15	0.016
		16	0.135
		17	0.286
		18	0.297
		19	0.083
		20	0.036
		21	0.042
33	VGL3235	12	0.281
		13	0.047
		14	0.594
		15	0.016
		16	0.005
		17	0.016
		18	0.042

Standard genetic assessment based on 33 autosomal STR loci

Great Dane

		N	Na	Ne	Ho	He	F
	Mean	96	6.758	3.146	0.598	0.645	0.076
	SE		0.386	0.182	0.024	0.021	0.018

Standard genetic assessment based on 7 STRs in the DLA region

Great Dane

		N	Na	Ne	Ho	He	F
	Mean	96	5.571	2.638	0.554	0.587	0.053
	SE		0.805	0.300	0.037	0.043	0.022

Standard genetic assessment for individual STR loci

Great Dane

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	96	12	5.079	0.844	0.803	-0.051
2	AHT137	96	7	2.596	0.500	0.615	0.187
3	AHTH130	96	8	4.071	0.531	0.754	0.296
4	AHTh171-A	96	8	4.762	0.708	0.790	0.103
5	AHTh260	96	7	2.414	0.521	0.586	0.111
6	AHTk211	96	4	3.038	0.667	0.671	0.006
7	AHTk253	96	4	2.713	0.635	0.631	-0.006
8	C22.279	96	5	2.274	0.542	0.560	0.033
9	FH2001	96	7	2.683	0.542	0.627	0.137
10	FH2054	96	8	3.335	0.719	0.700	-0.027
11	FH2848	96	5	1.900	0.375	0.474	0.209
12	INRA21	96	6	3.283	0.667	0.695	0.041
13	INU005	96	5	2.281	0.490	0.562	0.128
14	INU030	96	4	1.884	0.531	0.469	-0.132
15	INU055	96	6	4.179	0.771	0.761	-0.013
16	LEI004	96	5	1.876	0.375	0.467	0.197
17	REN105L03	96	6	3.029	0.573	0.670	0.145
18	REN162C04	96	6	3.234	0.708	0.691	-0.025
19	REN169D01	96	4	2.822	0.427	0.646	0.339
20	REN169O18	96	5	2.613	0.625	0.617	-0.013
21	REN247M23	96	3	1.429	0.260	0.300	0.132
22	REN54P11	96	7	3.271	0.656	0.694	0.055
23	REN64E19	96	6	4.502	0.719	0.778	0.076
24	VGL0760	96	9	5.484	0.771	0.818	0.057
25	VGL0910	96	11	3.654	0.625	0.726	0.139
26	VGL1063	96	8	2.844	0.479	0.648	0.261
27	VGL1165	96	12	2.676	0.604	0.626	0.035
28	VGL1828	96	8	4.450	0.760	0.775	0.019
29	VGL2009	96	5	1.960	0.479	0.490	0.022
30	VGL2409	96	7	4.183	0.750	0.761	0.014
31	VGL2918	96	9	2.126	0.490	0.530	0.076
32	VGL3008	96	9	4.876	0.813	0.795	-0.022
33	VGL3235	96	7	2.293	0.573	0.564	-0.016

Standard genetic assessment for 7 STRs in the DLA region

Great Dane

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	96	10	3.930	0.635	0.746	0.148
2	DLA I-4ACA	96	5	3.461	0.656	0.711	0.077
3	DLA I-4BCT	96	4	1.820	0.438	0.450	0.029
4	DLA1131	96	7	2.042	0.448	0.510	0.122
5	5ACA	96	5	1.862	0.458	0.463	0.010
6	5ACT	96	5	3.146	0.688	0.682	-0.008
7	5BCA	96	3	2.208	0.552	0.547	-0.009

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Great Dane

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Great Dane

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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