Statistics and Breed-wide Allele Frequency - Great Dane

Updated Nov 22, 2024

DLA Class I Haplotype Frequencies

DLA1 #STR typesGreat Dane (n=93)
1006387 375 293 1800.011
1009382 377 277 1840.081
1016382 371 277 1780.204
1030380 373 293 1780.269
1066376 375 277 1780.210
1068380 373 287 1810.011
1091381 371 277 1810.048
1094395 375 277 1760.032
1129382 371 277 1810.075
1273376 375 277 1760.005
1274385 371 277 1810.005
1275387 371 277 1810.016
1276392 373 281 1820.016
1277394 369 277 1830.005
1278399 373 277 1810.011

DLA Class II Haplotype Frequencies

DLA2 #STR typesGreat Dane (n=93)
2003343 324 2820.005
2005339 322 2800.048
2007351 327 2800.011
2014339 322 2840.043
2022339 327 2820.081
2023341 323 2820.269
2033339 323 2820.151
2046339 329 2800.355
2053343 324 2800.011
2086339 329 2840.011
2136353 324 2800.016

Allele Frequencies

#Locus NameAlleleGreat Dane (n=93)
1AHT121 800.016
940.070
980.312
1000.005
1020.027
1040.005
1060.108
1080.011
1100.048
1120.027
1140.263
1180.108
2AHT137 1290.005
1310.124
1330.027
1370.075
1410.183
1470.581
1510.005
3AHTH130 1170.016
1190.129
1210.161
1230.032
1250.005
1270.409
1310.065
1330.183
4AHTh171-A 2190.328
2210.016
2250.027
2270.161
2290.199
2330.140
2350.124
2370.005
5AHTh260 2380.011
2420.022
2440.280
2460.575
2480.065
2500.043
2540.005
6AHTk211 870.016
890.296
910.398
950.290
7AHTk253 2860.220
2880.495
2900.263
2920.022
8C22.279 1160.038
1180.613
1200.081
1220.038
1240.231
9FH2001 1280.005
1320.215
1360.038
1440.543
1480.145
1520.043
1580.011
10FH2054 1480.016
1520.005
1560.452
1600.242
1640.167
1680.070
1720.022
1760.027
11FH2848 2320.043
2340.688
2380.188
2400.065
2420.016
12INRA21 910.038
950.387
990.344
1010.210
1030.005
1050.016
13INU005 1100.016
1220.065
1240.328
1260.575
1320.016
14INU030 1440.038
1460.005
1500.677
1520.280
15INU055 2040.022
2080.075
2100.145
2120.296
2160.323
2180.140
16LEI004 850.134
950.720
970.097
1070.011
1110.038
17REN105L03 2270.059
2310.210
2330.070
2350.516
2410.059
2450.086
18REN162C04 1920.065
1940.005
2020.258
2040.086
2060.129
2080.457
19REN169D01 2020.027
2120.226
2160.484
2200.263
20REN169O18 1640.032
1660.108
1680.457
1700.398
1720.005
21REN247M23 2680.177
2720.817
2780.005
22REN54P11 2220.005
2260.156
2280.118
2320.038
2340.204
2380.478
23REN64E19 1390.156
1430.124
1450.124
1470.134
1490.376
1530.086
24VGL0760 120.156
130.016
19.20.065
20.20.043
21.20.032
22.20.177
23.20.242
24.20.247
25.20.022
25VGL0910 120.016
140.043
17.10.011
18.10.016
190.005
19.10.054
20.10.323
21.10.392
22.10.091
23.10.032
24.10.016
26VGL1063 120.005
130.059
140.387
150.441
160.043
170.043
180.011
190.011
27VGL1165 150.005
180.038
190.032
210.016
220.005
250.005
260.167
270.581
280.027
290.113
300.005
310.005
28VGL1828 140.022
150.070
160.392
170.059
190.140
200.134
210.027
220.156
29VGL2009 90.269
130.011
140.027
150.656
160.038
30VGL2409 130.194
140.005
150.102
160.054
170.333
180.274
190.038
31VGL2918 110.011
120.016
130.677
140.102
150.027
160.038
18.30.048
19.30.043
21.30.038
32VGL3008 130.070
140.032
150.016
160.129
170.290
180.301
190.081
200.038
210.043
33VGL3235 120.285
130.048
140.591
150.011
160.005
170.016
180.043

Standard genetic assessment based on 33 autosomal STR loci

Great Dane

  NNaNeHoHeF
Mean936.7273.1380.5990.6440.073
 SE 0.3860.1810.0240.0210.018

Standard genetic assessment based on 7 STRs in the DLA region

Great Dane

  NNaNeHoHeF
Mean935.5712.5990.5550.5810.041
 SE 0.8050.2970.0400.0440.022

Standard genetic assessment for individual STR loci

Great Dane

#LocusNNaNeHoHeF
1AHT12193125.0280.8490.801-0.060
2AHT1379372.5490.5050.6080.168
3AHTH1309384.0240.5380.7510.285
4AHTh171-A9384.7850.7100.7910.103
5AHTh2609372.4060.5160.5840.117
6AHTk2119343.0280.6770.670-0.011
7AHTk2539342.7540.6450.637-0.013
8C22.2799352.2810.5480.5620.023
9FH20019372.7350.5480.6340.136
10FH20549383.3710.7310.703-0.040
11FH28489351.9410.3870.4850.201
12INRA219363.1860.6770.6860.013
13INU0059352.2560.4730.5570.150
14INU0309341.8570.5270.461-0.142
15INU0559364.1980.7740.762-0.016
16LEI0049351.8250.3550.4520.215
17REN105L039363.0340.5810.6700.134
18REN162C049363.2930.7100.696-0.019
19REN169D019342.8150.4410.6450.316
20REN169O189352.6330.6340.620-0.023
21REN247M239331.4300.2580.3010.142
22REN54P119363.2210.6450.6900.064
23REN64E199364.5050.7100.7780.088
24VGL07609395.4570.7850.8170.039
25VGL091093113.6610.6340.7270.127
26VGL10639382.8440.4730.6480.270
27VGL116593122.6230.6020.6190.027
28VGL18289384.4340.7530.7740.028
29VGL20099351.9810.4840.4950.023
30VGL24099374.1920.7420.7610.026
31VGL29189392.0940.4840.5230.074
32VGL30089394.8180.8060.792-0.018
33VGL32359372.2960.5700.564-0.010

Standard genetic assessment for 7 STRs in the DLA region

Great Dane

#LocusNNaNeHoHeF
1DLA I-3CCA93103.8650.6450.7410.130
2DLA I-4ACA9353.4580.6670.7110.062
3DLA I-4BCT9341.7870.4300.4400.023
4DLA11319371.9910.4410.4980.114
55ACA9351.8300.4520.4540.004
65ACT9353.0560.6880.673-0.023
75BCA9332.2090.5590.547-0.022