Statistics and Breed-wide Allele Frequency - Great Dane

Updated Jul 18, 2025

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Great Dane (n=114)
1006	387 375 293 180	0.018
1009	382 377 277 184	0.070
1016	382 371 277 178	0.193
1030	380 373 293 178	0.241
1066	376 375 277 178	0.215
1068	380 373 287 181	0.026
1091	381 371 277 181	0.048
1094	395 375 277 176	0.057
1129	382 371 277 181	0.083
1273	376 375 277 176	0.004
1274	385 371 277 181	0.004
1275	387 371 277 181	0.013
1276	392 373 281 182	0.013
1277	394 369 277 183	0.004
1278	399 373 277 181	0.009

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Great Dane (n=114)
2003	343 324 282	0.004
2005	339 322 280	0.070
2007	351 327 280	0.018
2014	339 322 284	0.035
2022	339 327 282	0.070
2023	341 323 282	0.241
2033	339 323 282	0.154
2046	339 329 280	0.360
2053	343 324 280	0.026
2086	339 329 284	0.009
2136	353 324 280	0.013

Allele Frequencies

#	Locus Name	Allele	Great Dane (n=116)
1	AHT121	80	0.022
		94	0.065
		98	0.353
		100	0.004
		102	0.022
		104	0.013
		106	0.099
		108	0.009
		110	0.039
		112	0.022
		114	0.259
		118	0.095
2	AHT137	129	0.004
		131	0.125
		133	0.022
		137	0.073
		141	0.190
		147	0.582
		151	0.004
3	AHTH130	117	0.017
		119	0.134
		121	0.220
		123	0.026
		125	0.004
		127	0.388
		131	0.060
		133	0.151
4	AHTh171-A	219	0.332
		221	0.013
		225	0.030
		227	0.168
		229	0.203
		233	0.121
		235	0.125
		237	0.009
5	AHTh260	238	0.009
		242	0.017
		244	0.276
		246	0.565
		248	0.091
		250	0.039
		254	0.004
6	AHTk211	87	0.013
		89	0.332
		91	0.392
		95	0.263
7	AHTk253	286	0.228
		288	0.522
		290	0.228
		292	0.022
8	C22.279	116	0.030
		118	0.625
		120	0.069
		122	0.030
		124	0.246
9	FH2001	128	0.004
		132	0.172
		136	0.030
		140	0.004
		144	0.595
		148	0.147
		152	0.034
		158	0.013
10	FH2054	148	0.013
		152	0.004
		156	0.435
		160	0.297
		164	0.155
		168	0.056
		172	0.017
		176	0.022
11	FH2848	232	0.034
		234	0.716
		238	0.181
		240	0.056
		242	0.013
12	INRA21	91	0.056
		95	0.358
		99	0.328
		101	0.203
		103	0.030
		105	0.026
13	INU005	110	0.017
		122	0.056
		124	0.328
		126	0.582
		132	0.017
14	INU030	144	0.034
		146	0.004
		150	0.703
		152	0.259
15	INU055	204	0.017
		208	0.060
		210	0.147
		212	0.297
		216	0.358
		218	0.121
16	LEI004	85	0.164
		95	0.668
		97	0.125
		107	0.009
		111	0.034
17	REN105L03	227	0.078
		231	0.185
		233	0.073
		235	0.543
		241	0.047
		245	0.073
18	REN162C04	192	0.060
		194	0.004
		202	0.237
		204	0.086
		206	0.151
		208	0.461
19	REN169D01	202	0.026
		212	0.216
		216	0.470
		220	0.289
20	REN169O18	164	0.026
		166	0.095
		168	0.440
		170	0.435
		172	0.004
21	REN247M23	268	0.177
		272	0.815
		278	0.009
22	REN54P11	222	0.004
		226	0.129
		228	0.164
		232	0.034
		234	0.185
		236	0.004
		238	0.478
23	REN64E19	139	0.168
		143	0.125
		145	0.121
		147	0.151
		149	0.362
		153	0.073
24	VGL0760	12	0.154
		13	0.013
		19.2	0.053
		20.2	0.044
		21.2	0.035
		22.2	0.211
		23.2	0.211
		24.2	0.254
		25.2	0.026
25	VGL0910	12	0.013
		14	0.039
		17.1	0.009
		18.1	0.013
		19	0.004
		19.1	0.044
		20.1	0.329
		21.1	0.382
		22.1	0.105
		23.1	0.026
		24.1	0.035
26	VGL1063	12	0.009
		13	0.048
		14	0.360
		15	0.461
		16	0.035
		17	0.044
		18	0.035
		19	0.009
27	VGL1165	15	0.013
		18	0.035
		19	0.026
		21	0.013
		22	0.009
		25	0.004
		26	0.206
		27	0.509
		28	0.039
		29	0.127
		30	0.013
		31	0.004
28	VGL1828	14	0.018
		15	0.057
		16	0.421
		17	0.070
		19	0.127
		20	0.140
		21	0.022
		22	0.145
29	VGL2009	9	0.263
		13	0.009
		14	0.026
		15	0.658
		16	0.044
30	VGL2409	13	0.180
		14	0.022
		15	0.092
		16	0.044
		17	0.351
		18	0.272
		19	0.039
31	VGL2918	11	0.009
		12	0.018
		13	0.684
		14	0.110
		15	0.031
		16	0.031
		18.3	0.039
		19.3	0.039
		20.3	0.004
		21.3	0.035
32	VGL3008	13	0.096
		14	0.026
		15	0.018
		16	0.136
		17	0.259
		18	0.311
		19	0.079
		20	0.035
		21	0.039
33	VGL3235	12	0.263
		13	0.044
		14	0.605
		15	0.031
		16	0.004
		17	0.018
		18	0.035

Standard genetic assessment based on 33 autosomal STR loci

Great Dane

		N	Na	Ne	Ho	He	F
	Mean	116	6.818	3.115	0.592	0.642	0.081
	SE		0.394	0.177	0.023	0.021	0.015

Standard genetic assessment based on 7 STRs in the DLA region

Great Dane

		N	Na	Ne	Ho	He	F
	Mean	116	5.571	2.661	0.545	0.588	0.073
	SE		0.805	0.312	0.042	0.044	0.019

Standard genetic assessment for individual STR loci

Great Dane

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	116	12	4.588	0.828	0.782	-0.058
2	AHT137	116	7	2.525	0.517	0.604	0.144
3	AHTH130	116	8	4.097	0.569	0.756	0.247
4	AHTh171-A	116	8	4.744	0.724	0.789	0.082
5	AHTh260	116	7	2.469	0.483	0.595	0.189
6	AHTk211	116	4	3.000	0.647	0.667	0.030
7	AHTk253	116	4	2.654	0.629	0.623	-0.010
8	C22.279	116	5	2.185	0.509	0.542	0.062
9	FH2001	116	8	2.455	0.517	0.593	0.127
10	FH2054	116	8	3.266	0.672	0.694	0.031
11	FH2848	116	5	1.821	0.379	0.451	0.159
12	INRA21	116	6	3.558	0.690	0.719	0.041
13	INU005	116	5	2.224	0.500	0.550	0.091
14	INU030	116	4	1.780	0.483	0.438	-0.101
15	INU055	116	6	3.900	0.741	0.744	0.003
16	LEI004	116	5	2.040	0.414	0.510	0.189
17	REN105L03	116	6	2.871	0.560	0.652	0.140
18	REN162C04	116	6	3.303	0.672	0.697	0.036
19	REN169D01	116	4	2.847	0.466	0.649	0.282
20	REN169O18	116	5	2.548	0.586	0.607	0.035
21	REN247M23	116	3	1.439	0.267	0.305	0.124
22	REN54P11	116	7	3.246	0.647	0.692	0.066
23	REN64E19	116	6	4.594	0.733	0.782	0.063
24	VGL0760	116	9	5.443	0.763	0.816	0.065
25	VGL0910	116	11	3.694	0.640	0.729	0.122
26	VGL1063	116	8	2.871	0.465	0.652	0.287
27	VGL1165	116	12	3.109	0.632	0.678	0.069
28	VGL1828	116	8	4.114	0.737	0.757	0.027
29	VGL2009	116	5	1.981	0.491	0.495	0.008
30	VGL2409	116	7	4.135	0.702	0.758	0.074
31	VGL2918	116	10	2.054	0.482	0.513	0.060
32	VGL3008	116	9	4.957	0.825	0.798	-0.033
33	VGL3235	116	7	2.273	0.553	0.560	0.013

Standard genetic assessment for 7 STRs in the DLA region

Great Dane

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	116	10	4.056	0.649	0.753	0.138
2	DLA I-4ACA	116	5	3.423	0.649	0.708	0.083
3	DLA I-4BCT	116	4	1.785	0.404	0.440	0.082
4	DLA1131	116	7	2.153	0.465	0.536	0.132
5	5ACA	116	5	1.832	0.421	0.454	0.073
6	5ACT	116	5	3.203	0.693	0.688	-0.008
7	5BCA	116	3	2.178	0.535	0.541	0.011

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Great Dane

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Great Dane

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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