Statistics and Breed-wide Allele Frequency - Great Dane

Updated Oct 9, 2024

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Great Dane (n=90)
1006	387 375 293 180	0.011
1009	382 377 277 184	0.083
1016	382 371 277 178	0.194
1030	380 373 293 178	0.278
1066	376 375 277 178	0.200
1068	380 373 287 181	0.011
1091	381 371 277 181	0.050
1094	395 375 277 176	0.033
1129	382 371 277 181	0.078
1273	376 375 277 176	0.006
1274	385 371 277 181	0.006
1275	387 371 277 181	0.017
1276	392 373 281 182	0.017
1277	394 369 277 183	0.006
1278	399 373 277 181	0.011

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Great Dane (n=90)
2003	343 324 282	0.006
2005	339 322 280	0.050
2007	351 327 280	0.011
2014	339 322 284	0.028
2022	339 327 282	0.083
2023	341 323 282	0.278
2033	339 323 282	0.156
2046	339 329 280	0.356
2053	343 324 280	0.011
2086	339 329 284	0.006
2136	353 324 280	0.017

Allele Frequencies

#	Locus Name	Allele	Great Dane (n=90)
1	AHT121	80	0.017
		94	0.072
		98	0.311
		100	0.006
		102	0.028
		104	0.006
		106	0.106
		108	0.011
		110	0.050
		112	0.017
		114	0.267
		118	0.111
2	AHT137	129	0.006
		131	0.128
		133	0.028
		137	0.072
		141	0.167
		147	0.594
		151	0.006
3	AHTH130	117	0.017
		119	0.133
		121	0.161
		123	0.033
		125	0.006
		127	0.417
		131	0.044
		133	0.189
4	AHTh171-A	219	0.317
		221	0.017
		225	0.028
		227	0.167
		229	0.206
		233	0.144
		235	0.117
		237	0.006
5	AHTh260	238	0.011
		242	0.022
		244	0.267
		246	0.583
		248	0.067
		250	0.044
		254	0.006
6	AHTk211	87	0.017
		89	0.278
		91	0.411
		95	0.294
7	AHTk253	286	0.217
		288	0.506
		290	0.256
		292	0.022
8	C22.279	116	0.039
		118	0.611
		120	0.083
		122	0.039
		124	0.228
9	FH2001	128	0.006
		132	0.222
		136	0.039
		144	0.539
		148	0.139
		152	0.044
		158	0.011
10	FH2054	148	0.017
		152	0.006
		156	0.450
		160	0.239
		164	0.172
		168	0.067
		172	0.022
		176	0.028
11	FH2848	232	0.044
		234	0.700
		238	0.189
		240	0.050
		242	0.017
12	INRA21	91	0.039
		95	0.389
		99	0.344
		101	0.211
		105	0.017
13	INU005	110	0.017
		122	0.067
		124	0.317
		126	0.589
		132	0.011
14	INU030	144	0.039
		146	0.006
		150	0.683
		152	0.272
15	INU055	204	0.022
		208	0.078
		210	0.150
		212	0.289
		216	0.328
		218	0.133
16	LEI004	85	0.122
		95	0.733
		97	0.100
		107	0.006
		111	0.039
17	REN105L03	227	0.061
		231	0.194
		233	0.072
		235	0.522
		241	0.061
		245	0.089
18	REN162C04	192	0.067
		194	0.006
		202	0.250
		204	0.078
		206	0.133
		208	0.467
19	REN169D01	202	0.028
		212	0.228
		216	0.483
		220	0.261
20	REN169O18	164	0.033
		166	0.111
		168	0.439
		170	0.411
		172	0.006
21	REN247M23	268	0.167
		272	0.828
		278	0.006
22	REN54P11	222	0.006
		226	0.156
		228	0.122
		232	0.039
		234	0.194
		238	0.483
23	REN64E19	139	0.161
		143	0.117
		145	0.128
		147	0.139
		149	0.378
		153	0.078
24	VGL0760	12	0.150
		13	0.017
		19.2	0.067
		20.2	0.044
		21.2	0.022
		22.2	0.183
		23.2	0.239
		24.2	0.256
		25.2	0.022
25	VGL0910	12	0.017
		14	0.044
		17.1	0.011
		18.1	0.017
		19	0.006
		19.1	0.056
		20.1	0.322
		21.1	0.383
		22.1	0.094
		23.1	0.033
		24.1	0.017
26	VGL1063	12	0.006
		13	0.061
		14	0.378
		15	0.444
		16	0.044
		17	0.044
		18	0.011
		19	0.011
27	VGL1165	15	0.006
		18	0.039
		19	0.033
		21	0.017
		22	0.006
		25	0.006
		26	0.161
		27	0.578
		28	0.028
		29	0.117
		30	0.006
		31	0.006
28	VGL1828	14	0.022
		15	0.067
		16	0.394
		17	0.044
		19	0.144
		20	0.139
		21	0.028
		22	0.161
29	VGL2009	9	0.272
		13	0.011
		14	0.028
		15	0.656
		16	0.033
30	VGL2409	13	0.200
		14	0.006
		15	0.094
		16	0.056
		17	0.333
		18	0.272
		19	0.039
31	VGL2918	11	0.011
		12	0.017
		13	0.678
		14	0.094
		15	0.028
		16	0.039
		18.3	0.050
		19.3	0.044
		21.3	0.039
32	VGL3008	13	0.072
		14	0.033
		15	0.017
		16	0.117
		17	0.300
		18	0.300
		19	0.083
		20	0.033
		21	0.044
33	VGL3235	12	0.278
		13	0.050
		14	0.594
		15	0.011
		16	0.006
		17	0.017
		18	0.044

Standard genetic assessment based on 33 autosomal STR loci

Great Dane

		N	Na	Ne	Ho	He	F
	Mean	90	6.697	3.121	0.595	0.642	0.078
	SE		0.389	0.180	0.024	0.021	0.018

Standard genetic assessment based on 7 STRs in the DLA region

Great Dane

		N	Na	Ne	Ho	He	F
	Mean	90	5.571	2.598	0.556	0.582	0.038
	SE		0.805	0.295	0.035	0.043	0.026

Standard genetic assessment for individual STR loci

Great Dane

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	90	12	4.985	0.844	0.799	-0.056
2	AHT137	90	7	2.478	0.500	0.596	0.162
3	AHTH130	90	8	3.900	0.533	0.744	0.283
4	AHTh171-A	90	8	4.858	0.711	0.794	0.105
5	AHTh260	90	7	2.390	0.511	0.582	0.121
6	AHTk211	90	4	3.002	0.689	0.667	-0.033
7	AHTk253	90	4	2.715	0.633	0.632	-0.003
8	C22.279	90	5	2.297	0.544	0.565	0.036
9	FH2001	90	7	2.757	0.567	0.637	0.111
10	FH2054	90	8	3.387	0.722	0.705	-0.025
11	FH2848	90	5	1.885	0.367	0.470	0.219
12	INRA21	90	5	3.162	0.678	0.684	0.009
13	INU005	90	5	2.213	0.467	0.548	0.149
14	INU030	90	4	1.843	0.511	0.457	-0.117
15	INU055	90	6	4.207	0.778	0.762	-0.020
16	LEI004	90	5	1.772	0.356	0.436	0.184
17	REN105L03	90	6	3.020	0.578	0.669	0.136
18	REN162C04	90	6	3.241	0.700	0.691	-0.012
19	REN169D01	90	4	2.821	0.433	0.646	0.329
20	REN169O18	90	5	2.666	0.656	0.625	-0.049
21	REN247M23	90	3	1.402	0.233	0.287	0.187
22	REN54P11	90	6	3.204	0.644	0.688	0.063
23	REN64E19	90	6	4.465	0.700	0.776	0.098
24	VGL0760	90	9	5.371	0.778	0.814	0.044
25	VGL0910	90	11	3.747	0.633	0.733	0.136
26	VGL1063	90	8	2.872	0.467	0.652	0.284
27	VGL1165	90	12	2.651	0.600	0.623	0.037
28	VGL1828	90	8	4.360	0.744	0.771	0.034
29	VGL2009	90	5	1.977	0.478	0.494	0.033
30	VGL2409	90	7	4.188	0.733	0.761	0.037
31	VGL2918	90	9	2.097	0.478	0.523	0.087
32	VGL3008	90	9	4.756	0.800	0.790	-0.013
33	VGL3235	90	7	2.297	0.556	0.565	0.016

Standard genetic assessment for 7 STRs in the DLA region

Great Dane

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	90	10	3.891	0.633	0.743	0.148
2	DLA I-4ACA	90	5	3.467	0.656	0.712	0.079
3	DLA I-4BCT	90	4	1.816	0.444	0.449	0.011
4	DLA1131	90	7	2.039	0.456	0.510	0.106
5	5ACA	90	5	1.861	0.467	0.463	-0.008
6	5ACT	90	5	2.992	0.678	0.666	-0.018
7	5BCA	90	3	2.122	0.556	0.529	-0.051

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Great Dane

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Great Dane

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Connect with us on social media