Updated Jun 30, 2025
DLA Class I Haplotype Frequencies
DLA1 # | STR types | Great Dane (n=112) |
---|---|---|
1006 | 387 375 293 180 | 0.009 |
1009 | 382 377 277 184 | 0.071 |
1016 | 382 371 277 178 | 0.192 |
1030 | 380 373 293 178 | 0.246 |
1066 | 376 375 277 178 | 0.214 |
1068 | 380 373 287 181 | 0.027 |
1091 | 381 371 277 181 | 0.049 |
1094 | 395 375 277 176 | 0.058 |
1129 | 382 371 277 181 | 0.085 |
1273 | 376 375 277 176 | 0.004 |
1274 | 385 371 277 181 | 0.004 |
1275 | 387 371 277 181 | 0.013 |
1276 | 392 373 281 182 | 0.013 |
1277 | 394 369 277 183 | 0.004 |
1278 | 399 373 277 181 | 0.009 |
DLA Class II Haplotype Frequencies
DLA2 # | STR types | Great Dane (n=112) |
---|---|---|
2003 | 343 324 282 | 0.004 |
2005 | 339 322 280 | 0.071 |
2007 | 351 327 280 | 0.009 |
2014 | 339 322 284 | 0.036 |
2022 | 339 327 282 | 0.071 |
2023 | 341 323 282 | 0.246 |
2033 | 339 323 282 | 0.156 |
2046 | 339 329 280 | 0.357 |
2053 | 343 324 280 | 0.027 |
2086 | 339 329 284 | 0.009 |
2136 | 353 324 280 | 0.013 |
Allele Frequencies
# | Locus Name | Allele | Great Dane (n=113) |
---|---|---|---|
1 | AHT121 | 80 | 0.022 |
94 | 0.067 | ||
98 | 0.344 | ||
100 | 0.004 | ||
102 | 0.022 | ||
104 | 0.013 | ||
106 | 0.103 | ||
108 | 0.009 | ||
110 | 0.040 | ||
112 | 0.022 | ||
114 | 0.254 | ||
118 | 0.098 | ||
2 | AHT137 | 129 | 0.004 |
131 | 0.128 | ||
133 | 0.022 | ||
137 | 0.075 | ||
141 | 0.181 | ||
147 | 0.584 | ||
151 | 0.004 | ||
3 | AHTH130 | 117 | 0.013 |
119 | 0.134 | ||
121 | 0.219 | ||
123 | 0.027 | ||
125 | 0.004 | ||
127 | 0.388 | ||
131 | 0.058 | ||
133 | 0.156 | ||
4 | AHTh171-A | 219 | 0.335 |
221 | 0.013 | ||
225 | 0.027 | ||
227 | 0.170 | ||
229 | 0.201 | ||
233 | 0.121 | ||
235 | 0.125 | ||
237 | 0.009 | ||
5 | AHTh260 | 238 | 0.009 |
242 | 0.018 | ||
244 | 0.272 | ||
246 | 0.567 | ||
248 | 0.089 | ||
250 | 0.040 | ||
254 | 0.004 | ||
6 | AHTk211 | 87 | 0.013 |
89 | 0.327 | ||
91 | 0.394 | ||
95 | 0.265 | ||
7 | AHTk253 | 286 | 0.223 |
288 | 0.531 | ||
290 | 0.228 | ||
292 | 0.018 | ||
8 | C22.279 | 116 | 0.031 |
118 | 0.629 | ||
120 | 0.071 | ||
122 | 0.031 | ||
124 | 0.237 | ||
9 | FH2001 | 128 | 0.004 |
132 | 0.179 | ||
136 | 0.031 | ||
144 | 0.589 | ||
148 | 0.147 | ||
152 | 0.036 | ||
158 | 0.013 | ||
10 | FH2054 | 148 | 0.013 |
152 | 0.004 | ||
156 | 0.442 | ||
160 | 0.286 | ||
164 | 0.156 | ||
168 | 0.058 | ||
172 | 0.018 | ||
176 | 0.022 | ||
11 | FH2848 | 232 | 0.036 |
234 | 0.714 | ||
238 | 0.183 | ||
240 | 0.054 | ||
242 | 0.013 | ||
12 | INRA21 | 91 | 0.054 |
95 | 0.353 | ||
99 | 0.330 | ||
101 | 0.210 | ||
103 | 0.027 | ||
105 | 0.027 | ||
13 | INU005 | 110 | 0.018 |
122 | 0.058 | ||
124 | 0.326 | ||
126 | 0.580 | ||
132 | 0.018 | ||
14 | INU030 | 144 | 0.036 |
146 | 0.004 | ||
150 | 0.696 | ||
152 | 0.263 | ||
15 | INU055 | 204 | 0.018 |
208 | 0.063 | ||
210 | 0.143 | ||
212 | 0.295 | ||
216 | 0.357 | ||
218 | 0.125 | ||
16 | LEI004 | 85 | 0.161 |
95 | 0.679 | ||
97 | 0.116 | ||
107 | 0.009 | ||
111 | 0.036 | ||
17 | REN105L03 | 227 | 0.075 |
231 | 0.186 | ||
233 | 0.075 | ||
235 | 0.540 | ||
241 | 0.049 | ||
245 | 0.075 | ||
18 | REN162C04 | 192 | 0.063 |
194 | 0.004 | ||
202 | 0.237 | ||
204 | 0.085 | ||
206 | 0.147 | ||
208 | 0.464 | ||
19 | REN169D01 | 202 | 0.027 |
212 | 0.221 | ||
216 | 0.465 | ||
220 | 0.288 | ||
20 | REN169O18 | 164 | 0.027 |
166 | 0.098 | ||
168 | 0.433 | ||
170 | 0.438 | ||
172 | 0.004 | ||
21 | REN247M23 | 268 | 0.177 |
272 | 0.814 | ||
278 | 0.009 | ||
22 | REN54P11 | 222 | 0.004 |
226 | 0.134 | ||
228 | 0.156 | ||
232 | 0.036 | ||
234 | 0.192 | ||
236 | 0.004 | ||
238 | 0.473 | ||
23 | REN64E19 | 139 | 0.170 |
143 | 0.116 | ||
145 | 0.125 | ||
147 | 0.147 | ||
149 | 0.366 | ||
153 | 0.076 | ||
24 | VGL0760 | 12 | 0.156 |
13 | 0.013 | ||
19.2 | 0.054 | ||
20.2 | 0.045 | ||
21.2 | 0.036 | ||
22.2 | 0.214 | ||
23.2 | 0.210 | ||
24.2 | 0.250 | ||
25.2 | 0.022 | ||
25 | VGL0910 | 12 | 0.013 |
14 | 0.040 | ||
17.1 | 0.009 | ||
18.1 | 0.013 | ||
19 | 0.004 | ||
19.1 | 0.045 | ||
20.1 | 0.326 | ||
21.1 | 0.384 | ||
22.1 | 0.107 | ||
23.1 | 0.027 | ||
24.1 | 0.031 | ||
26 | VGL1063 | 12 | 0.004 |
13 | 0.049 | ||
14 | 0.357 | ||
15 | 0.469 | ||
16 | 0.036 | ||
17 | 0.045 | ||
18 | 0.031 | ||
19 | 0.009 | ||
27 | VGL1165 | 15 | 0.013 |
18 | 0.031 | ||
19 | 0.027 | ||
21 | 0.013 | ||
22 | 0.004 | ||
25 | 0.004 | ||
26 | 0.205 | ||
27 | 0.513 | ||
28 | 0.040 | ||
29 | 0.129 | ||
30 | 0.013 | ||
31 | 0.004 | ||
28 | VGL1828 | 14 | 0.018 |
15 | 0.058 | ||
16 | 0.415 | ||
17 | 0.067 | ||
19 | 0.129 | ||
20 | 0.143 | ||
21 | 0.022 | ||
22 | 0.147 | ||
29 | VGL2009 | 9 | 0.268 |
13 | 0.009 | ||
14 | 0.027 | ||
15 | 0.656 | ||
16 | 0.040 | ||
30 | VGL2409 | 13 | 0.179 |
14 | 0.022 | ||
15 | 0.094 | ||
16 | 0.045 | ||
17 | 0.348 | ||
18 | 0.272 | ||
19 | 0.040 | ||
31 | VGL2918 | 11 | 0.009 |
12 | 0.018 | ||
13 | 0.692 | ||
14 | 0.103 | ||
15 | 0.027 | ||
16 | 0.031 | ||
18.3 | 0.040 | ||
19.3 | 0.040 | ||
20.3 | 0.004 | ||
21.3 | 0.036 | ||
32 | VGL3008 | 13 | 0.098 |
14 | 0.027 | ||
15 | 0.018 | ||
16 | 0.138 | ||
17 | 0.254 | ||
18 | 0.308 | ||
19 | 0.080 | ||
20 | 0.036 | ||
21 | 0.040 | ||
33 | VGL3235 | 12 | 0.268 |
13 | 0.045 | ||
14 | 0.607 | ||
15 | 0.027 | ||
16 | 0.004 | ||
17 | 0.013 | ||
18 | 0.036 |
Standard genetic assessment based on 33 autosomal STR loci
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 113 | 6.788 | 3.119 | 0.592 | 0.642 | 0.079 | |
SE | 0.392 | 0.179 | 0.023 | 0.021 | 0.016 |
Standard genetic assessment based on 7 STRs in the DLA region
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 113 | 5.571 | 2.643 | 0.552 | 0.586 | 0.055 | |
SE | 0.805 | 0.309 | 0.042 | 0.045 | 0.020 |
Standard genetic assessment for individual STR loci
Great Dane
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | AHT121 | 113 | 12 | 4.740 | 0.830 | 0.789 | -0.052 |
2 | AHT137 | 113 | 7 | 2.521 | 0.522 | 0.603 | 0.135 |
3 | AHTH130 | 113 | 8 | 4.076 | 0.563 | 0.755 | 0.255 |
4 | AHTh171-A | 113 | 8 | 4.709 | 0.714 | 0.788 | 0.093 |
5 | AHTh260 | 113 | 7 | 2.465 | 0.482 | 0.594 | 0.189 |
6 | AHTk211 | 113 | 4 | 3.003 | 0.646 | 0.667 | 0.032 |
7 | AHTk253 | 113 | 4 | 2.603 | 0.616 | 0.616 | -0.000 |
8 | C22.279 | 113 | 5 | 2.177 | 0.509 | 0.541 | 0.059 |
9 | FH2001 | 113 | 7 | 2.480 | 0.518 | 0.597 | 0.132 |
10 | FH2054 | 113 | 8 | 3.270 | 0.688 | 0.694 | 0.010 |
11 | FH2848 | 113 | 5 | 1.825 | 0.375 | 0.452 | 0.170 |
12 | INRA21 | 113 | 6 | 3.548 | 0.696 | 0.718 | 0.030 |
13 | INU005 | 113 | 5 | 2.237 | 0.491 | 0.553 | 0.112 |
14 | INU030 | 113 | 4 | 1.800 | 0.491 | 0.444 | -0.105 |
15 | INU055 | 113 | 6 | 3.927 | 0.759 | 0.745 | -0.018 |
16 | LEI004 | 113 | 5 | 1.996 | 0.420 | 0.499 | 0.159 |
17 | REN105L03 | 113 | 6 | 2.896 | 0.558 | 0.655 | 0.148 |
18 | REN162C04 | 113 | 6 | 3.285 | 0.679 | 0.696 | 0.025 |
19 | REN169D01 | 113 | 4 | 2.872 | 0.460 | 0.652 | 0.294 |
20 | REN169O18 | 113 | 5 | 2.569 | 0.598 | 0.611 | 0.020 |
21 | REN247M23 | 113 | 3 | 1.440 | 0.265 | 0.306 | 0.132 |
22 | REN54P11 | 113 | 7 | 3.285 | 0.661 | 0.696 | 0.050 |
23 | REN64E19 | 113 | 6 | 4.559 | 0.732 | 0.781 | 0.062 |
24 | VGL0760 | 113 | 9 | 5.444 | 0.759 | 0.816 | 0.070 |
25 | VGL0910 | 113 | 11 | 3.692 | 0.643 | 0.729 | 0.118 |
26 | VGL1063 | 113 | 8 | 2.825 | 0.464 | 0.646 | 0.281 |
27 | VGL1165 | 113 | 12 | 3.064 | 0.625 | 0.674 | 0.072 |
28 | VGL1828 | 113 | 8 | 4.168 | 0.741 | 0.760 | 0.025 |
29 | VGL2009 | 113 | 5 | 1.981 | 0.491 | 0.495 | 0.008 |
30 | VGL2409 | 113 | 7 | 4.163 | 0.705 | 0.760 | 0.072 |
31 | VGL2918 | 113 | 10 | 2.016 | 0.473 | 0.504 | 0.061 |
32 | VGL3008 | 113 | 9 | 5.030 | 0.821 | 0.801 | -0.025 |
33 | VGL3235 | 113 | 7 | 2.249 | 0.554 | 0.555 | 0.003 |
Standard genetic assessment for 7 STRs in the DLA region
Great Dane
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | DLA I-3CCA | 113 | 10 | 4.003 | 0.652 | 0.750 | 0.131 |
2 | DLA I-4ACA | 113 | 5 | 3.428 | 0.652 | 0.708 | 0.080 |
3 | DLA I-4BCT | 113 | 4 | 1.776 | 0.411 | 0.437 | 0.060 |
4 | DLA1131 | 113 | 7 | 2.131 | 0.473 | 0.531 | 0.108 |
5 | 5ACA | 113 | 5 | 1.809 | 0.429 | 0.447 | 0.042 |
6 | 5ACT | 113 | 5 | 3.171 | 0.705 | 0.685 | -0.030 |
7 | 5BCA | 113 | 3 | 2.182 | 0.545 | 0.542 | -0.006 |