Statistics and Breed-wide Allele Frequency - Great Dane

Updated Oct 29, 2025

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Great Dane (n=118)
1006	387 375 293 180	0.017
1009	382 377 277 184	0.072
1016	382 371 277 178	0.191
1030	380 373 293 178	0.242
1066	376 375 277 178	0.212
1068	380 373 287 181	0.030
1091	381 371 277 181	0.047
1094	395 375 277 176	0.059
1129	382 371 277 181	0.085
1273	376 375 277 176	0.004
1274	385 371 277 181	0.004
1275	387 371 277 181	0.013
1276	392 373 281 182	0.013
1277	394 369 277 183	0.004
1278	399 373 277 181	0.008

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Great Dane (n=118)
2003	343 324 282	0.004
2005	339 322 280	0.072
2007	351 327 280	0.017
2014	339 322 284	0.034
2022	339 327 282	0.072
2023	341 323 282	0.242
2033	339 323 282	0.153
2046	339 329 280	0.356
2053	343 324 280	0.030
2086	339 329 284	0.008
2136	353 324 280	0.013

Allele Frequencies

#	Locus Name	Allele	Great Dane (n=118)
1	AHT121	80	0.021
		94	0.064
		98	0.356
		100	0.004
		102	0.021
		104	0.013
		106	0.097
		108	0.008
		110	0.038
		112	0.021
		114	0.263
		118	0.093
2	AHT137	129	0.004
		131	0.123
		133	0.021
		137	0.072
		141	0.186
		147	0.589
		151	0.004
3	AHTH130	117	0.017
		119	0.131
		121	0.216
		123	0.025
		125	0.004
		127	0.386
		131	0.059
		133	0.161
4	AHTh171-A	219	0.335
		221	0.013
		225	0.030
		227	0.165
		229	0.199
		233	0.119
		235	0.131
		237	0.008
5	AHTh260	238	0.008
		242	0.017
		244	0.271
		246	0.572
		248	0.089
		250	0.038
		254	0.004
6	AHTk211	87	0.013
		89	0.326
		91	0.398
		95	0.263
7	AHTk253	286	0.225
		288	0.525
		290	0.229
		292	0.021
8	C22.279	116	0.030
		118	0.623
		120	0.068
		122	0.030
		124	0.250
9	FH2001	128	0.004
		132	0.178
		136	0.030
		140	0.004
		144	0.589
		148	0.148
		152	0.034
		158	0.013
10	FH2054	148	0.013
		152	0.004
		156	0.432
		160	0.297
		164	0.161
		168	0.055
		172	0.017
		176	0.021
11	FH2848	232	0.034
		234	0.720
		238	0.178
		240	0.055
		242	0.013
12	INRA21	91	0.055
		95	0.356
		99	0.326
		101	0.208
		103	0.030
		105	0.025
13	INU005	110	0.017
		122	0.055
		124	0.331
		126	0.581
		132	0.017
14	INU030	144	0.034
		146	0.004
		150	0.695
		152	0.267
15	INU055	204	0.017
		208	0.059
		210	0.144
		212	0.301
		216	0.356
		218	0.123
16	LEI004	85	0.169
		95	0.665
		97	0.123
		107	0.008
		111	0.034
17	REN105L03	227	0.076
		231	0.182
		233	0.072
		235	0.551
		241	0.047
		245	0.072
18	REN162C04	192	0.059
		194	0.004
		202	0.237
		204	0.085
		206	0.153
		208	0.462
19	REN169D01	202	0.025
		212	0.212
		216	0.470
		220	0.292
20	REN169O18	164	0.025
		166	0.093
		168	0.445
		170	0.432
		172	0.004
21	REN247M23	268	0.178
		272	0.814
		278	0.008
22	REN54P11	222	0.004
		226	0.127
		228	0.161
		232	0.034
		234	0.182
		236	0.004
		238	0.487
23	REN64E19	139	0.165
		143	0.123
		145	0.119
		147	0.153
		149	0.369
		153	0.072
24	VGL0760	12	0.148
		13	0.013
		19.2	0.051
		20.2	0.047
		21.2	0.034
		22.2	0.220
		23.2	0.203
		24.2	0.258
		25.2	0.025
25	VGL0910	12	0.013
		14	0.038
		17.1	0.008
		18.1	0.013
		19	0.004
		19.1	0.042
		20.1	0.326
		21.1	0.390
		22.1	0.106
		23.1	0.025
		24.1	0.034
26	VGL1063	12	0.008
		13	0.047
		14	0.352
		15	0.470
		16	0.038
		17	0.042
		18	0.034
		19	0.008
27	VGL1165	15	0.013
		18	0.034
		19	0.025
		21	0.013
		22	0.008
		25	0.004
		26	0.208
		27	0.504
		28	0.042
		29	0.127
		30	0.017
		31	0.004
28	VGL1828	14	0.017
		15	0.055
		16	0.432
		17	0.072
		19	0.123
		20	0.136
		21	0.021
		22	0.144
29	VGL2009	9	0.254
		13	0.008
		14	0.025
		15	0.669
		16	0.042
30	VGL2409	13	0.182
		14	0.025
		15	0.093
		16	0.042
		17	0.343
		18	0.271
		19	0.042
31	VGL2918	11	0.008
		12	0.017
		13	0.695
		14	0.106
		15	0.030
		16	0.030
		18.3	0.038
		19.3	0.038
		20.3	0.004
		21.3	0.034
32	VGL3008	13	0.106
		14	0.025
		15	0.017
		16	0.140
		17	0.250
		18	0.309
		19	0.081
		20	0.034
		21	0.038
33	VGL3235	12	0.258
		13	0.047
		14	0.606
		15	0.034
		16	0.004
		17	0.017
		18	0.034

Standard genetic assessment based on 33 autosomal STR loci

Great Dane

		N	Na	Ne	Ho	He	F
	Mean	118	6.818	3.101	0.590	0.641	0.081
	SE		0.394	0.177	0.023	0.021	0.015

Standard genetic assessment based on 7 STRs in the DLA region

Great Dane

		N	Na	Ne	Ho	He	F
	Mean	118	5.571	2.670	0.551	0.590	0.067
	SE		0.805	0.310	0.042	0.044	0.019

Standard genetic assessment for individual STR loci

Great Dane

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	118	12	4.525	0.831	0.779	-0.066
2	AHT137	118	7	2.485	0.508	0.598	0.149
3	AHTH130	118	8	4.115	0.568	0.757	0.250
4	AHTh171-A	118	8	4.729	0.729	0.789	0.076
5	AHTh260	118	7	2.436	0.475	0.589	0.195
6	AHTk211	118	4	2.992	0.644	0.666	0.033
7	AHTk253	118	4	2.636	0.627	0.621	-0.010
8	C22.279	118	5	2.189	0.517	0.543	0.048
9	FH2001	118	8	2.483	0.525	0.597	0.120
10	FH2054	118	8	3.282	0.669	0.695	0.037
11	FH2848	118	5	1.802	0.373	0.445	0.162
12	INRA21	118	6	3.561	0.695	0.719	0.034
13	INU005	118	5	2.223	0.492	0.550	0.107
14	INU030	118	4	1.801	0.483	0.445	-0.086
15	INU055	118	6	3.893	0.737	0.743	0.008
16	LEI004	118	5	2.051	0.424	0.512	0.173
17	REN105L03	118	6	2.817	0.551	0.645	0.146
18	REN162C04	118	6	3.294	0.678	0.696	0.026
19	REN169D01	118	4	2.839	0.475	0.648	0.267
20	REN169O18	118	5	2.537	0.585	0.606	0.035
21	REN247M23	118	3	1.442	0.271	0.306	0.115
22	REN54P11	118	7	3.186	0.636	0.686	0.074
23	REN64E19	118	6	4.528	0.729	0.779	0.065
24	VGL0760	118	9	5.393	0.754	0.815	0.074
25	VGL0910	118	11	3.635	0.644	0.725	0.112
26	VGL1063	118	8	2.844	0.466	0.648	0.281
27	VGL1165	118	12	3.146	0.636	0.682	0.068
28	VGL1828	118	8	4.000	0.729	0.750	0.028
29	VGL2009	118	5	1.940	0.475	0.485	0.021
30	VGL2409	118	7	4.211	0.712	0.763	0.066
31	VGL2918	118	10	1.999	0.466	0.500	0.067
32	VGL3008	118	9	5.026	0.822	0.801	-0.026
33	VGL3235	118	7	2.279	0.551	0.561	0.019

Standard genetic assessment for 7 STRs in the DLA region

Great Dane

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	118	10	4.035	0.653	0.752	0.132
2	DLA I-4ACA	118	5	3.435	0.653	0.709	0.080
3	DLA I-4BCT	118	4	1.796	0.407	0.443	0.082
4	DLA1131	118	7	2.177	0.483	0.541	0.107
5	5ACA	118	5	1.842	0.424	0.457	0.073
6	5ACT	118	5	3.232	0.703	0.691	-0.019
7	5BCA	118	3	2.172	0.534	0.540	0.010

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Great Dane

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Great Dane

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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