Statistics and Breed-wide Allele Frequency - Akita

Updated Dec 3, 2021

DLA Class I Haplotype Frequencies

DLA1 #STR typesAmerican Akita (n=158)Japanese Akita (n=532)Blend Akita (n=59)Unknown Akita (n=4)
1006387 375 293 1800.082------
1014375 373 287 178------0.1
1029380 365 281 1820.1800.25940.1610.3
1040380 371 277 1860.006------
1045376 371 277 1860.003------
1061380 365 281 1830.0190.17950.0680.1
1067376 373 277 1780.0090.00380.017--
1081395 379 289 1780.3990.13160.3220.3
1082390 373 277 1840.1930.01320.1270.1
1083395 375 277 1860.0850.09960.2460.1
1087380 371 277 1780.013------
1092376 379 277 181--0.30640.008--
1108382 371 277 180--0.0009----
1114380 373 287 183--0.0009----
1135388 385 281 180--0.00380.051--
1149395 377 277 186--0.0009----
1160386 369 289 1760.003------
1246395 375 277 1880.006------

DLA Class II Haplotype Frequencies

DLA2 #STR typesAmerican Akita (n=158)Japanese Akita (n=532)Blend Akita (n=59)Unknown Akita (n=4)
2007351 327 2800.082------
2012345 322 280--0.0009----
2017343 322 2800.0090.00380.017--
2032339 323 2800.003------
2033339 323 2820.013------
2035341 323 280--0.30640.008--
2036341 327 276--0.0028----
2037341 327 2800.1800.25660.1530.3
2039345 327 2760.0920.10430.2970.1
2056339 323 2860.5820.14470.4490.4
2057341 327 2860.0190.17760.0680.1
2058345 323 2880.006------
2060343 323 2840.003------
2061341 327 296--0.0019----
2062345 327 282------0.1
2063345 327 2860.003------
2069349 322 280--0.0009----
2071339 322 2860.003------
2103341 323 286----0.008--
2130339 323 2760.003------

Allele Frequencies

#Locus NameAlleleAmerican Akita (n=188)Japanese Akita (n=540)Blend Akita (n=68)Unknown Akita (n=4)
1AHT121 780.1210.00370.037--
900.005--0.007--
920.0030.01590.0070.1
960.0860.00190.007--
1000.0830.11400.052--
1020.0620.00190.0600.1
1040.1800.09720.0750.5
106--0.00470.007--
1080.4600.74110.7460.3
110--0.0093----
112--0.0103----
2AHT137 1310.009------
1330.1970.49440.5240.1
1370.0260.0121--0.3
1450.0170.0028----
1470.0320.0028--0.1
1490.0320.0093----
1510.6850.47570.4760.5
1530.0030.0028----
3AHTH130 1110.113--0.032--
113--0.0075----
1190.0810.02710.1610.3
1210.3930.09350.1940.1
1230.0060.00840.016--
1250.0780.00090.0320.1
1270.0120.00280.008--
1310.0780.80840.2020.4
133--0.0009--0.1
1370.2340.05050.355--
1390.006------
4AHTh171-A 2190.2460.38600.3000.1
2210.1970.03360.085--
2250.0050.03640.015--
2290.2510.02060.1920.4
2310.003------
2330.0350.01780.0150.1
2350.1840.48600.3850.4
2370.078--0.008--
239--0.0196----
5AHTh260 2360.0320.0028----
2380.3200.23360.323--
240--0.00090.008--
244--0.01310.008--
2460.6420.65790.6611.0
2480.0030.0907----
250--0.0009----
2560.003------
6AHTk211 870.0510.00190.007--
890.2910.87480.5440.4
910.3130.12150.2870.5
990.3450.00190.1620.1
7AHTk253 2840.0730.16450.031--
2880.9030.52520.8230.9
2900.003------
2920.0220.31030.1460.1
8C22.279 1100.0220.00280.112--
1160.6510.99070.7610.5
118----0.015--
120--0.00090.0070.1
122--0.0009----
1240.2020.00190.0450.3
126------0.1
1300.1260.00280.060--
9FH2001 1320.0350.14860.007--
1360.0480.15790.0820.4
1400.0080.00840.030--
1440.8170.59350.7910.4
1480.0730.02900.0670.3
1520.0190.06070.022--
154--0.0019----
10FH2054 1520.0430.03670.0300.1
1560.4620.65600.5670.5
1600.0350.22370.022--
1640.0160.01790.067--
1680.0030.0009----
1720.0620.06200.0370.1
1760.3310.00190.2460.3
1800.0430.00090.030--
1840.005------
11FH2848 2280.0240.0009----
2300.0910.18130.0160.1
232--0.0009----
2340.009------
2360.2530.04670.4020.4
2380.5530.48040.4020.4
2400.0290.27760.1800.1
2420.0350.0075----
2440.0030.0047----
2460.003------
12INRA21 950.005----0.1
970.5590.39110.4780.4
990.0540.14800.037--
1010.2040.36220.3970.4
1030.011------
1050.1670.09870.0880.1
13INU005 1060.0350.29290.044--
1100.008----0.1
1240.7810.59610.5590.8
1260.1260.01770.199--
1320.0510.09330.1990.1
14INU030 1440.3310.37570.5880.5
1460.1560.22800.0590.3
1500.1800.12900.074--
1520.094--0.029--
1540.2390.26730.2500.3
15INU055 2100.2140.32340.110--
2120.1230.11800.103--
2140.3370.18680.2720.4
2200.059----0.1
2220.2670.37080.5150.5
224--0.0009----
16LEI004 850.5190.32310.5160.1
890.1080.00280.008--
950.3380.67320.4690.8
1090.0350.00090.0080.1
17REN105L03 2270.0230.06450.113--
2290.1220.24950.1130.1
2310.2650.09530.363--
2330.2530.29160.0560.3
235--0.00840.008--
2370.2700.21590.2100.3
2390.0520.03460.1290.3
2410.0150.04020.0080.1
18REN162C04 2000.0540.09180.140--
202--0.0047----
2040.4300.47470.1760.5
2060.4090.16290.2350.4
2080.0110.00470.015--
2100.0970.26120.4340.1
19REN169D01 2020.7600.56540.6690.9
204--0.0009----
2100.0090.0037----
2120.0120.22520.032--
2160.2200.11310.2020.1
220--0.09160.097--
20REN169O18 1600.1680.63360.6770.3
1620.0030.0009----
1640.0580.00470.0160.3
1660.0090.0009--0.1
1680.0120.0037--0.1
1700.4910.00930.105--
1720.2600.34670.2020.3
21REN247M23 2680.1220.23930.1130.5
2700.0200.00840.0080.1
2720.8110.69440.7740.4
2740.0030.0009----
2760.0440.05700.105--
22REN54P11 2240.024--0.086--
2260.1960.51780.4380.1
2280.016------
2300.003------
2320.0050.00190.0080.1
2340.5630.05980.1880.5
2360.1900.42060.2810.3
2380.003------
23REN64E19 1390.1260.52140.2500.4
1430.0130.00930.0220.1
1450.2990.20860.3310.4
1470.3210.01860.0880.1
1490.1100.00090.147--
1510.0670.22530.154--
1530.0640.01580.007--
24VGL0760 120.0220.0009----
130.0440.0037----
140.3550.34940.5370.3
150.0050.39500.0450.3
16--0.0019----
180.003------
18.20.2980.00090.0820.5
19.20.041------
21.2--0.0009----
22.20.0030.0009----
23.20.1120.07430.216--
24.20.0930.15710.119--
25.20.0250.0139----
26.2--0.0009----
25VGL0910 15.10.2990.12830.1720.4
16.10.0570.00370.007--
17.10.0050.0288----
18.10.2830.56970.6120.4
19.10.1110.03720.045--
20.10.0870.20720.1340.3
21.10.1010.00840.022--
22.10.0570.01670.007--
26VGL1063 80.011----0.1
110.003------
120.019------
130.2830.18870.5510.5
140.6200.56690.4040.4
150.0480.21280.029--
160.0110.03070.007--
170.0050.00090.007--
27VGL1165 140.0350.00090.066--
15----0.007--
16--0.0065----
18------0.1
190.7420.80200.6320.4
200.0130.0362----
210.024------
22--0.0009----
260.024--0.0150.3
270.032--0.015--
280.003------
290.0130.07250.0070.1
300.0940.06510.0070.1
310.0190.01300.250--
32--0.0028----
28VGL1828 150.003--0.007--
17--0.0009--0.1
180.5220.19700.1910.4
190.2220.70260.4040.1
19.30.0410.01490.1030.1
200.0860.05300.191--
20.30.1270.01770.0510.3
21.3--0.01390.051--
29VGL2009 90.003--0.007--
100.0080.00930.015--
110.0670.00190.029--
120.3980.13290.3240.3
130.4140.65520.5000.5
140.0430.17470.0370.3
150.0160.0242----
160.0510.00190.088--
30VGL2409 130.005------
140.2890.01860.140--
150.0080.01020.007--
160.2430.17660.2720.3
170.0830.67010.3010.3
180.2350.11520.2720.5
190.1360.00740.007--
20--0.0019----
31VGL2918 11--0.0019----
120.0350.02330.0150.1
130.0460.26770.3280.4
13.30.0030.0009----
140.1580.08680.2090.1
150.0080.0159----
16--0.0009----
17.30.1280.08300.067--
18.30.6170.50840.3660.3
19.30.0050.01120.0150.1
32VGL3008 120.0590.16260.0290.1
130.032------
140.0110.00090.0960.1
150.0990.54830.1180.4
160.4300.13200.3530.3
170.3610.15520.4040.1
180.0050.0009----
190.003------
33VGL3235 120.2620.00190.1030.3
130.008------
140.4150.64870.5880.8
150.1690.01950.221--
16--0.0623----
170.1370.00370.059--
180.0080.25930.029--
19--0.0046----

Standard genetic assessment based on 33 autosomal STR loci

Blend Akita

  NNaNeHoHeF
Mean8007.7882.7150.5450.6000.093
 SE 0.4340.1380.0210.0210.011

American Akita

  NNaNeHoHeF
Mean1886.7272.9540.5700.6090.061
 SE 0.3270.1850.0260.0270.010

Japanese Akita

  NNaNeHoHeF
Mean5406.6062.3920.5310.5410.020
 SE 0.3530.1270.0260.0260.007

Unknown Akita

  NNaNeHoHeF
Mean43.5452.8430.5980.598-0.018
 SE 0.1770.1560.0390.0300.046

Standard genetic assessment based on 7 STRs in the DLA region

Blend Akita

  NNaNeHoHeF
Mean8006.7143.1010.5880.6470.091
 SE 0.7750.4000.0320.0350.013

American Akita

  NNaNeHoHeF
Mean1885.5712.8310.6300.627-0.006
 SE 0.5290.2430.0340.0330.006

Japanese Akita

  NNaNeHoHeF
Mean5405.1432.6430.5650.5890.039
 SE 0.5510.3200.0360.0410.010

Unknown Akita

  NNaNeHoHeF
Mean43.7143.1450.8930.665-0.356
 SE 0.3330.2380.0470.0330.070

Standard genetic assessment for individual STR loci

Blend Akita

#LocusNNaNeHoHeF
1AHT121800112.0870.4790.5210.081
2AHT13780082.1880.5140.5430.053
3AHTH130800112.5060.4600.6010.235
4AHTh171-A80093.3380.6430.7000.083
5AHTh26080081.9910.4760.4980.044
6AHTk21180041.8440.3410.4580.255
7AHTk25380042.0880.4820.5210.076
8C22.27980081.2580.1680.2050.182
9FH200180072.1280.4860.5300.083
10FH205480092.4730.5340.5960.104
11FH2848800103.0990.6180.6770.087
12INRA2180063.0700.6300.6740.065
13INU00580052.1660.4940.5380.082
14INU03080053.6730.7110.7280.023
15INU05580063.6570.6640.7270.086
16LEI00480042.0720.4420.5170.146
17REN105L0380085.1050.7920.8040.015
18REN162C0480063.2460.6280.6920.093
19REN169D0180062.3010.5700.565-0.008
20REN169O1880072.5170.5080.6030.158
21REN247M2380051.7510.4170.4290.029
22REN54P1180082.8550.5210.6500.198
23REN64E1980073.7570.6610.7340.100
24VGL0760800144.0930.6960.7560.079
25VGL091080083.1160.6250.6790.079
26VGL106380082.4790.5750.5970.037
27VGL1165800151.6540.3870.3950.021
28VGL182880082.5050.4880.6010.188
29VGL200980082.4650.5500.5940.074
30VGL240980083.0840.5600.6760.172
31VGL2918800102.9230.6520.6580.008
32VGL300880083.5720.6620.7200.080
33VGL323580082.5360.5620.6060.071

American Akita

#LocusNNaNeHoHeF
1AHT12118883.6160.7150.7230.012
2AHT13718881.9570.4620.4890.055
3AHTH13018894.1500.6990.7590.079
4AHTh171-A18884.9070.7780.7960.022
5AHTh26018851.9380.4360.4840.099
6AHTk21118843.2860.6360.6960.085
7AHTk25318841.2190.1680.1790.066
8C22.27918842.0820.4950.5200.048
9FH200118861.4770.3010.3230.068
10FH205418893.0110.5480.6680.179
11FH284818892.6260.5880.6190.050
12INRA2118862.5960.5810.6150.056
13INU00518851.5890.3420.3710.077
14INU03018854.3070.7310.7680.048
15INU05518854.0110.6790.7510.095
16LEI00418842.5230.5410.6040.105
17REN105L0318874.4360.7730.7750.002
18REN162C0418852.7450.5380.6360.154
19REN169D0118841.5970.4050.374-0.083
20REN169O1818872.9350.5200.6590.211
21REN247M2318851.4810.3430.325-0.056
22REN54P1118882.5520.5430.6080.106
23REN64E1918874.3630.7170.7710.070
24VGL0760188114.1540.7810.759-0.029
25VGL091018884.8580.7390.7940.069
26VGL106318882.1360.4970.5320.065
27VGL1165188101.7750.4090.4370.064
28VGL182818862.8860.5950.6540.090
29VGL200918882.9500.6400.6610.032
30VGL240918874.4740.7380.7760.050
31VGL291818882.3520.5490.5750.045
32VGL300818883.0300.6680.6700.002
33VGL323518863.4630.6610.7110.070

Japanese Akita

#LocusNNaNeHoHeF
1AHT121540101.7480.4070.4280.048
2AHT13754072.1230.5360.529-0.014
3AHTH13054091.5020.3360.334-0.006
4AHTh171-A54072.5720.5960.6110.025
5AHTh26054072.0170.4950.5040.017
6AHTk21154041.2820.1910.2200.133
7AHTk25354032.5050.6090.601-0.014
8C22.27954061.0190.0190.019-0.006
9FH200154072.4760.5630.5960.056
10FH205454082.0580.5240.514-0.020
11FH284854082.9160.6520.6570.007
12INRA2154043.1670.6440.6840.058
13INU00554042.2220.5370.5500.023
14INU03054043.5560.7250.719-0.009
15INU05554053.4370.6710.7090.054
16LEI00454041.7930.4230.4420.045
17REN105L0354084.7610.7930.790-0.003
18REN162C0454063.0430.6480.6710.035
19REN169D0154062.5530.6220.608-0.023
20REN169O1854071.9160.4970.478-0.040
21REN247M2354051.8420.4450.4570.027
22REN54P1154042.2300.4930.5510.105
23REN64E1954072.7260.6260.6330.012
24VGL0760540123.2410.6900.6910.003
25VGL091054082.5870.6020.6130.018
26VGL106354052.4800.6000.597-0.006
27VGL116554091.5280.3640.346-0.054
28VGL182854071.8660.4130.4640.111
29VGL200954072.0910.4960.5220.049
30VGL240954072.0240.4720.5060.067
31VGL2918540102.8940.6620.655-0.012
32VGL300854062.7130.6510.631-0.030
33VGL323554072.0310.5090.508-0.003

Unknown Akita

#LocusNNaNeHoHeF
1AHT121442.9090.5000.6560.238
2AHT137442.9090.5000.6560.238
3AHTH130454.0000.5000.7500.333
4AHTh171-A443.2000.7500.688-0.091
5AHTh260411.0000.0000.0000.000
6AHTk211432.4620.7500.594-0.263
7AHTk253421.2800.2500.219-0.143
8C22.279442.9091.0000.656-0.524
9FH2001432.9090.5000.6560.238
10FH2054442.9090.7500.656-0.143
11FH2848443.2000.5000.6880.273
12INRA21443.2000.7500.688-0.091
13INU005431.6840.5000.406-0.231
14INU030432.6670.5000.6250.200
15INU055432.4620.5000.5940.158
16LEI004431.6840.5000.406-0.231
17REN105L03454.5710.7500.7810.040
18REN162C04432.4620.5000.5940.158
19REN169D01421.2800.2500.219-0.143
20REN169O18454.5710.7500.7810.040
21REN247M23432.4621.0000.594-0.684
22REN54P11442.9090.7500.656-0.143
23REN64E19443.2000.5000.6880.273
24VGL0760432.6670.5000.6250.200
25VGL0910432.9090.2500.6560.619
26VGL1063432.4620.5000.5940.158
27VGL1165454.0000.7500.7500.000
28VGL1828454.0000.7500.7500.000
29VGL2009432.6670.7500.625-0.200
30VGL2409432.6670.7500.625-0.200
31VGL2918454.0001.0000.750-0.333
32VGL3008454.0000.7500.7500.000
33VGL3235421.6000.5000.375-0.333

Standard genetic assessment for 7 STRs in the DLA region

Blend Akita

#LocusNNaNeHoHeF
1DLA I-3CCA80093.4100.6350.7070.101
2DLA I-4ACA80083.0050.6220.6670.068
3DLA I-4BCT80052.9520.6100.6610.077
4DLA113180095.4720.7370.8170.098
55ACA80062.3240.4760.5700.165
65ACT80032.0310.4800.5080.054
75BCA80072.5130.5590.6020.071

American Akita

#LocusNNaNeHoHeF
1DLA I-3CCA18862.9380.6560.6600.006
2DLA I-4ACA18863.6230.7420.724-0.025
3DLA I-4BCT18853.1770.6940.685-0.012
4DLA113118883.6430.7200.7260.007
55ACA18852.3260.5580.5700.022
65ACT18831.9380.4940.484-0.020
75BCA18862.1720.5500.540-0.019

Japanese Akita

#LocusNNaNeHoHeF
1DLA I-3CCA54062.9100.6350.6560.033
2DLA I-4ACA54072.5360.5660.6060.065
3DLA I-4BCT54042.5460.5790.6070.046
4DLA113154074.5170.7370.7790.053
55ACA54051.7040.4220.413-0.022
65ACT54032.0050.4690.5010.064
75BCA54042.2860.5430.5630.035

Unknown Akita

#LocusNNaNeHoHeF
1DLA I-3CCA443.2001.0000.688-0.455
2DLA I-4ACA443.5561.0000.719-0.391
3DLA I-4BCT443.5560.7500.719-0.043
4DLA1131454.0001.0000.750-0.333
55ACA432.9091.0000.656-0.524
65ACT421.8820.7500.469-0.600
75BCA442.9090.7500.656-0.143