Statistics and Breed-wide Allele Frequency - Akita

Updated Sep 16, 2021

DLA Class I Haplotype Frequencies

DLA1 #STR typesAmerican Akita (n=156)Japanese Akita (n=523)Blend Akita (n=59)Unknown Akita (n=4)
1006387 375 293 1800.080------
1014375 373 287 178------0.1
1029380 365 281 1820.1830.25430.1610.3
1040380 371 277 1860.006------
1045376 371 277 1860.003------
1061380 365 281 1830.0190.18160.0680.1
1067376 373 277 1780.0100.00380.017--
1081395 379 289 1780.4010.13100.3220.3
1082390 373 277 1840.1920.01340.1270.1
1083395 375 277 1860.0830.09940.2460.1
1087380 371 277 1780.013------
1092376 379 277 181--0.30980.008--
1108382 371 277 180--0.0010----
1114380 373 287 183--0.0010----
1135388 385 281 180--0.00380.051--
1149395 377 277 186--0.0010----
1160386 369 289 1760.003------
1246395 375 277 1880.006------

DLA Class II Haplotype Frequencies

DLA2 #STR typesAmerican Akita (n=156)Japanese Akita (n=523)Blend Akita (n=59)Unknown Akita (n=4)
2007351 327 2800.080------
2012345 322 280--0.0010----
2017343 322 2800.0100.00380.017--
2032339 323 2800.003------
2033339 323 2820.013------
2035341 323 280--0.30980.008--
2036341 327 276--0.0029----
2037341 327 2800.1830.25140.1530.3
2039345 327 2760.0900.10420.2970.1
2056339 323 2860.5830.14440.4490.4
2057341 327 2860.0190.17970.0680.1
2058345 323 2880.006------
2060343 323 2840.003------
2061341 327 296--0.0019----
2062345 327 282------0.1
2063345 327 2860.003------
2069349 322 280--0.0010----
2071339 322 2860.003------
2103341 323 286----0.008--
2130339 323 2760.003------

Allele Frequencies

#Locus NameAlleleAmerican Akita (n=186)Japanese Akita (n=531)Blend Akita (n=68)Unknown Akita (n=4)
1AHT121 780.1220.00380.037--
900.005--0.007--
920.0030.01620.0070.1
960.0870.00190.007--
1000.0820.11410.052--
1020.0630.00190.0600.1
1040.1820.09790.0750.5
106--0.00480.007--
1080.4570.73950.7460.3
110--0.0095----
112--0.0105----
2AHT137 1310.009------
1330.1990.49330.5240.1
1370.0260.0124--0.3
1450.0180.0029----
1470.0320.0029--0.1
1490.0320.0095----
1510.6840.47620.4760.5
153--0.0029----
3AHTH130 1110.114--0.032--
113--0.0076----
1190.0760.02660.1610.3
1210.3980.09510.1940.1
1230.0060.00860.016--
1250.0790.00100.0320.1
1270.0120.00290.008--
1310.0760.81080.2020.4
133--0.0010--0.1
1370.2340.04660.355--
1390.006------
4AHTh171-A 2190.2490.38590.3000.1
2210.1990.03140.085--
2250.0050.03710.015--
2290.2510.02090.1920.4
2310.003------
2330.0360.01810.0150.1
2350.1800.48670.3850.4
2370.077--0.008--
239--0.0200----
5AHTh260 2360.0320.0029----
2380.3210.23480.323--
240--0.00100.008--
244--0.01330.008--
2460.6410.65490.6611.0
2480.0030.0922----
250--0.0010----
2560.003------
6AHTk211 870.0460.00190.007--
890.2890.87360.5440.4
910.3160.12260.2870.5
990.3490.00190.1620.1
7AHTk253 2840.0740.16730.031--
2880.9020.52380.8230.9
2900.003------
2920.0220.30890.1460.1
8C22.279 1100.0220.00290.112--
1160.6520.99050.7610.5
118----0.015--
120--0.00100.0070.1
122--0.0010----
1240.2010.00190.0450.3
126------0.1
1300.1250.00290.060--
9FH2001 1320.0350.15020.007--
1360.0490.15110.0820.4
1400.0080.00860.030--
1440.8180.59790.7910.4
1480.0710.02950.0670.3
1520.0190.06080.022--
154--0.0019----
10FH2054 1520.0410.03730.0300.1
1560.4620.65680.5670.5
1600.0350.22180.022--
1640.0160.01820.067--
1680.0030.0010----
1720.0630.06210.0370.1
1760.3320.00190.2460.3
1800.0430.00100.030--
1840.005------
11FH2848 2280.0240.0010----
2300.0890.17780.0160.1
232--0.0010----
2340.009------
2360.2530.04750.4020.4
2380.5540.48000.4020.4
2400.0300.28040.1800.1
2420.0360.0076----
2440.0030.0048----
2460.003------
12INRA21 950.005----0.1
970.5600.38540.4780.4
990.0540.14870.037--
1010.2040.36650.3970.4
1030.011------
1050.1660.09940.0880.1
13INU005 1060.0350.29600.044--
1100.008----0.1
1240.7780.59200.5590.8
1260.1270.01800.199--
1320.0510.09390.1990.1
14INU030 1440.3290.37450.5880.5
1460.1580.22720.0590.3
1500.1790.13020.074--
1520.092--0.029--
1540.2420.26810.2500.3
15INU055 2100.2140.32610.110--
2120.1220.11720.103--
2140.3410.18900.2720.4
2200.059----0.1
2220.2650.36670.5150.5
224--0.0009----
16LEI004 850.5160.32480.5160.1
890.1090.00280.008--
950.3390.67140.4690.8
1090.0360.00090.0080.1
17REN105L03 2270.0240.06080.113--
2290.1210.24520.1130.1
2310.2680.09600.363--
2330.2530.29560.0560.3
235--0.00860.008--
2370.2680.21770.2100.3
2390.0530.03520.1290.3
2410.0150.04090.0080.1
18REN162C04 2000.0540.09140.140--
202--0.0048----
2040.4320.47710.1760.5
2060.4050.15900.2350.4
2080.0110.00480.015--
2100.0980.26290.4340.1
19REN169D01 2020.7600.56180.6690.9
204--0.0010----
2100.0090.0038----
2120.0120.22530.032--
2160.2190.11500.2020.1
220--0.09320.097--
20REN169O18 1600.1640.63400.6770.3
1620.0030.0010----
1640.0580.00480.0160.3
1660.0090.0010--0.1
1680.0120.0038--0.1
1700.4910.00950.105--
1720.2630.34600.2020.3
21REN247M23 2680.1240.23760.1130.5
2700.0210.00860.0080.1
2720.8090.69580.7740.4
2740.0030.0010----
2760.0440.05700.105--
22REN54P11 2240.025--0.086--
2260.1980.51710.4380.1
2280.016------
2300.003------
2320.0050.00190.0080.1
2340.5600.06080.1880.5
2360.1900.42020.2810.3
2380.003------
23REN64E19 1390.1240.51700.2500.4
1430.0140.00950.0220.1
1450.3030.20930.3310.4
1470.3190.01890.0880.1
1490.1080.00090.147--
1510.0680.22820.154--
1530.0650.01610.007--
24VGL0760 120.0220.0009----
130.0440.0038----
140.3510.34880.5370.3
150.0060.39600.0450.3
16--0.0019----
180.003------
18.20.2980.00090.0820.5
19.20.041------
21.2--0.0009----
22.20.0030.0009----
23.20.1130.07370.216--
24.20.0940.15690.119--
25.20.0250.0142----
26.2--0.0009----
25VGL0910 15.10.2990.12380.1720.4
16.10.0580.00380.007--
17.10.0050.0293----
18.10.2800.57180.6120.4
19.10.1100.03780.045--
20.10.0880.20790.1340.3
21.10.1020.00850.022--
22.10.0580.01700.007--
26VGL1063 80.011----0.1
110.003------
120.019------
130.2810.19090.5510.5
140.6220.56330.4040.4
150.0490.21360.029--
160.0110.03120.007--
170.0050.00090.007--
27VGL1165 140.0350.00090.066--
15----0.007--
16--0.0066----
18------0.1
190.7420.80150.6320.4
200.0140.0369----
210.024------
22--0.0009----
260.022--0.0150.3
270.033--0.015--
280.003------
290.0140.07280.0070.1
300.0950.06430.0070.1
310.0190.01320.250--
32--0.0028----
28VGL1828 150.003--0.007--
17--0.0009--0.1
180.5190.19850.1910.4
190.2240.69940.4040.1
19.30.0380.01510.1030.1
200.0870.05390.191--
20.30.1280.01800.0510.3
21.3--0.01420.051--
29VGL2009 90.003--0.007--
100.0080.00950.015--
110.0680.00190.029--
120.4020.13140.3240.3
130.4130.65500.5000.5
140.0410.17580.0370.3
150.0160.0246----
160.0490.00190.088--
30VGL2409 130.005------
140.2890.01800.140--
150.0080.01040.007--
160.2410.17860.2720.3
170.0840.66820.3010.3
180.2350.11530.2720.5
190.1380.00760.007--
20--0.0019----
31VGL2918 11--0.0019----
120.0360.02180.0150.1
130.0470.27040.3280.4
13.30.0030.0009----
140.1570.08630.2090.1
150.0080.0161----
16--0.0009----
17.30.1290.07970.067--
18.30.6150.51040.3660.3
19.30.0050.01140.0150.1
32VGL3008 120.0590.16070.0290.1
130.032------
140.0110.00090.0960.1
150.1000.55010.1180.4
160.4300.13040.3530.3
170.3620.15690.4040.1
180.0030.0009----
190.003------
33VGL3235 120.2620.00190.1030.3
130.008------
140.4140.65410.5880.8
150.1710.01980.221--
16--0.0577----
170.1350.00380.059--
180.0080.25800.029--
19--0.0047----

Standard genetic assessment based on 33 autosomal STR loci

Blend Akita

  NNaNeHoHeF
Mean7897.7882.7180.5450.6000.094
 SE 0.4340.1380.0210.0210.011

American Akita

  NNaNeHoHeF
Mean1866.6972.9540.5700.6090.062
 SE 0.3250.1850.0260.0270.010

Japanese Akita

  NNaNeHoHeF
Mean5316.6062.3920.5310.5410.020
 SE 0.3530.1270.0260.0260.007

Unknown Akita

  NNaNeHoHeF
Mean43.5452.8430.5980.598-0.018
 SE 0.1770.1560.0390.0300.046

Standard genetic assessment based on 7 STRs in the DLA region

Blend Akita

  NNaNeHoHeF
Mean7896.7143.1020.5880.6470.091
 SE 0.7750.4010.0330.0350.013

American Akita

  NNaNeHoHeF
Mean1865.5712.8220.6270.626-0.001
 SE 0.5290.2420.0340.0330.006

Japanese Akita

  NNaNeHoHeF
Mean5315.1432.6450.5650.5900.039
 SE 0.5510.3200.0370.0410.011

Unknown Akita

  NNaNeHoHeF
Mean43.7143.1450.8930.665-0.356
 SE 0.3330.2380.0470.0330.070

Standard genetic assessment for individual STR loci

Blend Akita

#LocusNNaNeHoHeF
1AHT121789112.0980.4800.5230.083
2AHT13778982.1870.5120.5430.056
3AHTH130789112.5050.4560.6010.241
4AHTh171-A78993.3410.6410.7010.085
5AHTh26078982.0010.4800.5000.040
6AHTk21178941.8520.3450.4600.250
7AHTk25378942.0920.4790.5220.081
8C22.27978981.2590.1680.2060.185
9FH200178972.1110.4880.5260.073
10FH205478992.4740.5320.5960.107
11FH2848789103.0990.6140.6770.094
12INRA2178963.0800.6300.6750.067
13INU00578952.1800.4970.5410.081
14INU03078953.6760.7100.7280.025
15INU05578963.6650.6650.7270.085
16LEI00478942.0760.4440.5180.143
17REN105L0378985.0930.7950.8040.010
18REN162C0478963.2390.6290.6910.091
19REN169D0178962.3130.5710.568-0.007
20REN169O1878972.5220.5090.6040.157
21REN247M2378951.7500.4160.4280.029
22REN54P1178982.8590.5220.6500.197
23REN64E1978973.7820.6640.7360.098
24VGL0760789144.1060.6940.7560.083
25VGL091078983.1150.6210.6790.085
26VGL106378982.4890.5750.5980.039
27VGL1165789151.6560.3870.3960.023
28VGL182878982.5180.4910.6030.185
29VGL200978982.4690.5480.5950.079
30VGL240978983.0970.5610.6770.171
31VGL2918789102.9110.6510.6570.008
32VGL300878983.5630.6590.7190.084
33VGL323578982.5150.5590.6020.072

American Akita

#LocusNNaNeHoHeF
1AHT12118683.6410.7170.7250.011
2AHT13718671.9580.4620.4890.056
3AHTH13018694.1010.6960.7560.080
4AHTh171-A18684.8910.7810.7960.018
5AHTh26018651.9420.4350.4850.103
6AHTk21118643.2540.6430.6930.071
7AHTk25318641.2210.1690.1810.065
8C22.27918642.0750.4890.5180.056
9FH200118661.4750.2990.3220.071
10FH205418693.0090.5430.6680.186
11FH284818692.6230.5830.6190.057
12INRA2118662.5940.5760.6150.063
13INU00518651.5980.3460.3740.075
14INU03018654.3080.7280.7680.052
15INU05518653.9990.6810.7500.092
16LEI00418642.5340.5410.6050.106
17REN105L0318674.4370.7760.775-0.002
18REN162C0418652.7530.5380.6370.155
19REN169D0118641.5970.4040.374-0.080
20REN169O1818672.9320.5260.6590.201
21REN247M2318651.4880.3470.328-0.058
22REN54P1118682.5640.5440.6100.108
23REN64E1918674.3580.7140.7710.074
24VGL0760186114.1920.7850.761-0.030
25VGL091018684.8780.7360.7950.074
26VGL106318682.1350.4920.5320.075
27VGL1165186101.7750.4080.4360.066
28VGL182818662.8960.5960.6550.090
29VGL200918682.9290.6360.6590.035
30VGL240918674.4860.7350.7770.054
31VGL291818682.3620.5490.5770.047
32VGL300818683.0250.6650.6690.007
33VGL323518663.4680.6570.7120.076

Japanese Akita

#LocusNNaNeHoHeF
1AHT121531101.7540.4090.4300.049
2AHT13753172.1260.5340.530-0.009
3AHTH13053191.4940.3310.330-0.001
4AHTh171-A53172.5680.5930.6110.029
5AHTh26053172.0290.5020.5070.011
6AHTk21153141.2850.1920.2220.134
7AHTk25353132.5140.6060.602-0.007
8C22.27953161.0190.0190.019-0.006
9FH200153172.4540.5670.5920.044
10FH205453182.0570.5240.514-0.020
11FH284853182.9150.6480.6570.013
12INRA2153143.1760.6460.6850.057
13INU00553142.2360.5410.5530.022
14INU03053143.5630.7240.719-0.007
15INU05553153.4450.6730.7100.052
16LEI00453141.7980.4260.4440.040
17REN105L0353184.7430.7970.789-0.009
18REN162C0453163.0260.6500.6700.030
19REN169D0153162.5750.6250.612-0.022
20REN169O1853171.9160.4960.478-0.038
21REN247M2353151.8380.4430.4560.029
22REN54P1153142.2340.4940.5520.105
23REN64E1953172.7480.6310.6360.008
24VGL0760531123.2390.6860.6910.007
25VGL091053182.5760.5970.6120.024
26VGL106353152.4980.6030.600-0.006
27VGL116553191.5300.3650.347-0.053
28VGL182853171.8790.4160.4680.111
29VGL200953172.0920.4930.5220.055
30VGL240953172.0310.4740.5080.066
31VGL2918531102.8710.6600.652-0.013
32VGL300853162.7020.6470.630-0.026
33VGL323553172.0070.5050.502-0.006

Unknown Akita

#LocusNNaNeHoHeF
1AHT121442.9090.5000.6560.238
2AHT137442.9090.5000.6560.238
3AHTH130454.0000.5000.7500.333
4AHTh171-A443.2000.7500.688-0.091
5AHTh260411.0000.0000.0000.000
6AHTk211432.4620.7500.594-0.263
7AHTk253421.2800.2500.219-0.143
8C22.279442.9091.0000.656-0.524
9FH2001432.9090.5000.6560.238
10FH2054442.9090.7500.656-0.143
11FH2848443.2000.5000.6880.273
12INRA21443.2000.7500.688-0.091
13INU005431.6840.5000.406-0.231
14INU030432.6670.5000.6250.200
15INU055432.4620.5000.5940.158
16LEI004431.6840.5000.406-0.231
17REN105L03454.5710.7500.7810.040
18REN162C04432.4620.5000.5940.158
19REN169D01421.2800.2500.219-0.143
20REN169O18454.5710.7500.7810.040
21REN247M23432.4621.0000.594-0.684
22REN54P11442.9090.7500.656-0.143
23REN64E19443.2000.5000.6880.273
24VGL0760432.6670.5000.6250.200
25VGL0910432.9090.2500.6560.619
26VGL1063432.4620.5000.5940.158
27VGL1165454.0000.7500.7500.000
28VGL1828454.0000.7500.7500.000
29VGL2009432.6670.7500.625-0.200
30VGL2409432.6670.7500.625-0.200
31VGL2918454.0001.0000.750-0.333
32VGL3008454.0000.7500.7500.000
33VGL3235421.6000.5000.375-0.333

Standard genetic assessment for 7 STRs in the DLA region

Blend Akita

#LocusNNaNeHoHeF
1DLA I-3CCA78993.4160.6360.7070.100
2DLA I-4ACA78983.0020.6220.6670.068
3DLA I-4BCT78952.9510.6120.6610.074
4DLA113178995.4780.7370.8170.098
55ACA78962.3240.4750.5700.167
65ACT78932.0320.4780.5080.059
75BCA78972.5140.5580.6020.073

American Akita

#LocusNNaNeHoHeF
1DLA I-3CCA18662.9340.6520.6590.011
2DLA I-4ACA18663.6120.7390.723-0.022
3DLA I-4BCT18653.1700.6960.685-0.016
4DLA113118683.6210.7170.7240.009
55ACA18652.3160.5520.5680.028
65ACT18631.9360.4870.483-0.008
75BCA18662.1650.5440.538-0.012

Japanese Akita

#LocusNNaNeHoHeF
1DLA I-3CCA53162.9170.6380.6570.029
2DLA I-4ACA53172.5380.5660.6060.065
3DLA I-4BCT53142.5440.5810.6070.042
4DLA113153174.5160.7390.7790.051
55ACA53151.7020.4220.413-0.022
65ACT53132.0080.4680.5020.069
75BCA53142.2900.5430.5630.036

Unknown Akita

#LocusNNaNeHoHeF
1DLA I-3CCA443.2001.0000.688-0.455
2DLA I-4ACA443.5561.0000.719-0.391
3DLA I-4BCT443.5560.7500.719-0.043
4DLA1131454.0001.0000.750-0.333
55ACA432.9091.0000.656-0.524
65ACT421.8820.7500.469-0.600
75BCA442.9090.7500.656-0.143