Statistics and Breed-wide Allele Frequency - Alaskan Klee Kai

Updated Aug 9, 2020

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Alaskan Klee Kai (n=571)
1008	386 373 289 182	0.0595
1011	376 365 281 180	0.0587
1014	375 373 287 178	0.3792
1040	380 371 277 186	0.2102
1060	380 365 277 183	0.0079
1061	380 365 281 183	0.0455
1062	382 371 277 183	0.2137
1063	382 373 289 182	0.0096
1064	389 375 293 180	0.0131
1072	376 365 277 183	0.0018
1113	382 371 289 182	0.0009

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Alaskan Klee Kai (n=571)
2007	351 327 280	0.0131
2012	345 322 280	0.0622
2014	339 322 284	0.0701
2021	339 324 268	0.2119
2037	341 327 280	0.3792
2042	341 324 286	0.0455
2043	343 324 296	0.2180

Allele Frequencies

#	Locus Name	Allele	Alaskan Klee Kai (n=571)
1	AHT121	94	0.2154
		96	0.0009
		100	0.1235
		102	0.1900
		104	0.0018
		106	0.4667
		112	0.0018
2	AHT137	131	0.0858
		145	0.1506
		147	0.2408
		149	0.1760
		151	0.0604
		153	0.2863
3	AHTH130	113	0.1655
		121	0.0009
		125	0.2285
		127	0.2347
		129	0.3012
		131	0.0692
4	AHTh171-A	217	0.0009
		219	0.6138
		233	0.2863
		235	0.0989
5	AHTh260	242	0.1033
		244	0.4720
		246	0.2644
		248	0.0088
		252	0.1515
6	AHTk211	89	0.3748
		91	0.2364
		93	0.3371
		95	0.0517
7	AHTk253	286	0.0009
		288	0.3564
		290	0.3555
		292	0.2872
8	C22.279	118	0.4588
		124	0.3109
		126	0.2294
		132	0.0009
9	FH2001	124	0.0009
		136	0.3651
		140	0.0762
		144	0.5420
		148	0.0158
10	FH2054	152	0.4011
		156	0.3573
		160	0.0315
		168	0.0753
		172	0.1331
		176	0.0018
11	FH2848	232	0.4247
		238	0.1541
		240	0.4194
		242	0.0018
12	INRA21	95	0.0018
		97	0.9343
		101	0.0639
13	INU005	110	0.0639
		118	0.0009
		122	0.2207
		124	0.6322
		126	0.0823
14	INU030	144	0.6357
		148	0.2925
		150	0.0035
		152	0.0096
		156	0.0587
15	INU055	210	0.2539
		214	0.0482
		218	0.6961
		220	0.0018
16	LEI004	83	0.0018
		85	0.0140
		95	0.4991
		97	0.4851
17	REN105L03	227	0.2592
		231	0.0061
		233	0.6191
		241	0.1147
		245	0.0009
18	REN162C04	202	0.3590
		204	0.6173
		206	0.0236
19	REN169D01	202	0.2268
		210	0.0009
		212	0.5263
		216	0.1051
		218	0.0009
		220	0.1401
20	REN169O18	160	0.0044
		162	0.6961
		164	0.2872
		166	0.0114
		170	0.0009
21	REN247M23	266	0.0902
		268	0.2566
		270	0.5946
		276	0.0587
22	REN54P11	226	0.2531
		232	0.0053
		234	0.6506
		236	0.0911
23	REN64E19	139	0.0665
		143	0.2198
		145	0.0560
		149	0.5105
		153	0.1471
24	VGL0760	12	0.2557
		13	0.0026
		14	0.0560
		21.2	0.1594
		22.2	0.0228
		23.2	0.2881
		24.2	0.1681
		25.2	0.0438
		26.2	0.0035
25	VGL0910	13	0.2058
		14	0.0245
		16.1	0.0210
		18.1	0.0009
		20.1	0.0035
		21.1	0.1427
		22.1	0.5674
		23.1	0.0342
26	VGL1063	12	0.0009
		13	0.8940
		14	0.0184
		15	0.0718
		16	0.0131
		17	0.0018
27	VGL1165	13	0.0018
		14	0.1340
		19	0.3862
		21	0.0587
		25	0.0053
		26	0.1970
		28	0.0026
		29	0.1646
		30	0.0490
		31	0.0009
28	VGL1828	16	0.0552
		17	0.5788
		18	0.0158
		19	0.0053
		20	0.1077
		21	0.0105
		22	0.2268
29	VGL2009	11	0.1961
		12	0.3205
		13	0.3327
		15	0.0061
		16	0.1436
		17	0.0009
30	VGL2409	12	0.0009
		15	0.0263
		16	0.0009
		17	0.9081
		18	0.0534
		19	0.0105
31	VGL2918	12	0.0026
		13	0.2005
		14	0.1602
		15	0.0070
		21.3	0.0315
		22.3	0.5928
		23.3	0.0053
32	VGL3008	12	0.0009
		15	0.1515
		16	0.4807
		17	0.0455
		18	0.0009
		19	0.1883
		20	0.1130
		21	0.0149
		23	0.0044
33	VGL3235	12	0.6559
		13	0.0026
		14	0.3371
		15	0.0018
		16	0.0018
		18	0.0009

Standard genetic assessment based on 33 autosomal STR loci

		N	Na	Ne	Ho	He	F
Alaskan Klee Kai	Mean	571	5.515	2.654	0.572	0.572	0.004
	SE		0.294	0.163	0.029	0.028	0.006

Standard genetic assessment based on 7 STRs in the DLA region

		N	Na	Ne	Ho	He	F
Alaskan Klee Kai	Mean	571	4.714	3.114	0.657	0.672	0.023
	SE		0.333	0.173	0.021	0.019	0.006

Standard genetic assessment for individual STR loci

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	571	7	3.169	0.697	0.684	-0.018
2	AHT137	571	6	4.886	0.811	0.795	-0.020
3	AHTH130	571	6	4.344	0.795	0.770	-0.033
4	AHTh171-A	571	4	2.134	0.524	0.531	0.015
5	AHTh260	571	5	3.064	0.694	0.674	-0.030
6	AHTk211	571	4	3.198	0.690	0.687	-0.004
7	AHTk253	571	4	2.977	0.665	0.664	-0.002
8	C22.279	571	4	2.779	0.620	0.640	0.032
9	FH2001	571	5	2.308	0.566	0.567	0.002
10	FH2054	571	6	3.196	0.690	0.687	-0.004
11	FH2848	571	4	2.631	0.650	0.620	-0.048
12	INRA21	571	3	1.140	0.116	0.123	0.060
13	INU005	571	5	2.177	0.536	0.541	0.009
14	INU030	571	5	2.027	0.499	0.507	0.015
15	INU055	571	4	1.813	0.436	0.449	0.028
16	LEI004	571	4	2.063	0.503	0.515	0.025
17	REN105L03	571	5	2.157	0.515	0.536	0.040
18	REN162C04	571	3	1.959	0.485	0.489	0.009
19	REN169D01	571	6	2.785	0.641	0.641	-0.000
20	REN169O18	571	5	1.763	0.419	0.433	0.033
21	REN247M23	571	4	2.321	0.517	0.569	0.092
22	REN54P11	571	4	2.018	0.529	0.504	-0.049
23	REN64E19	571	5	2.957	0.676	0.662	-0.021
24	VGL0760	571	9	4.816	0.807	0.792	-0.019
25	VGL0910	571	8	2.585	0.606	0.613	0.012
26	VGL1063	571	6	1.242	0.180	0.195	0.075
27	VGL1165	571	10	4.186	0.751	0.761	0.013
28	VGL1828	571	7	2.491	0.615	0.599	-0.027
29	VGL2009	571	6	3.669	0.730	0.727	-0.004
30	VGL2409	571	6	1.207	0.170	0.172	0.011
31	VGL2918	571	7	2.390	0.609	0.582	-0.048
32	VGL3008	571	9	3.283	0.688	0.695	0.010
33	VGL3235	571	6	1.839	0.459	0.456	-0.006

Standard genetic assessment for 7 STRs in the DLA region

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	571	6	3.692	0.725	0.729	0.006
2	DLA I-4ACA	571	4	2.535	0.580	0.605	0.043
3	DLA I-4BCT	571	5	2.877	0.625	0.652	0.042
4	DLA1131	571	5	3.700	0.713	0.730	0.023
5	5ACA	571	5	3.211	0.681	0.689	0.011
6	5ACT	571	3	2.516	0.583	0.603	0.032
7	5BCA	571	5	3.268	0.690	0.694	0.006

Veterinary Genetics Laboratory

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Statistics and Breed-wide Allele Frequency - Alaskan Klee Kai

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Alaskan Klee Kai

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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