Statistics and Breed-wide Allele Frequency - Alaskan Klee Kai

Updated Jun 29, 2022

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Alaskan Klee Kai (n=624)
1008	386 373 289 182	0.0585
1011	376 365 281 180	0.0561
1014	375 373 287 178	0.3702
1040	380 371 277 186	0.2123
1060	380 365 277 183	0.0072
1061	380 365 281 183	0.0457
1062	382 371 277 183	0.2260
1063	382 373 289 182	0.0088
1064	389 375 293 180	0.0120
1072	376 365 277 183	0.0024
1113	382 371 289 182	0.0008

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Alaskan Klee Kai (n=624)
2007	351 327 280	0.0120
2012	345 322 280	0.0593
2014	339 322 284	0.0681
2021	339 324 268	0.2220
2037	341 327 280	0.3702
2042	341 324 286	0.0457
2043	343 324 296	0.2228

Allele Frequencies

#	Locus Name	Allele	Alaskan Klee Kai (n=625)
1	AHT121	94	0.2152
		96	0.0008
		100	0.1160
		102	0.1968
		104	0.0016
		106	0.4680
		112	0.0016
2	AHT137	131	0.0904
		145	0.1464
		147	0.2416
		149	0.1816
		151	0.0560
		153	0.2840
3	AHTH130	113	0.1680
		121	0.0024
		125	0.2216
		127	0.2448
		129	0.2968
		131	0.0664
4	AHTh171-A	217	0.0008
		219	0.6200
		233	0.2824
		235	0.0968
5	AHTh260	242	0.0992
		244	0.4696
		246	0.2672
		248	0.0104
		252	0.1536
6	AHTk211	87	0.0008
		89	0.3640
		91	0.2416
		93	0.3424
		95	0.0512
7	AHTk253	286	0.0008
		288	0.3544
		290	0.3584
		292	0.2864
8	C22.279	118	0.4560
		124	0.3152
		126	0.2280
		132	0.0008
9	FH2001	124	0.0016
		136	0.3672
		140	0.0752
		144	0.5416
		148	0.0144
10	FH2054	152	0.4064
		156	0.3544
		160	0.0312
		168	0.0736
		172	0.1328
		176	0.0016
11	FH2848	232	0.4312
		238	0.1552
		240	0.4112
		242	0.0024
12	INRA21	95	0.0016
		97	0.9376
		101	0.0608
13	INU005	110	0.0632
		118	0.0008
		122	0.2160
		124	0.6376
		126	0.0824
14	INU030	144	0.6304
		148	0.2992
		150	0.0032
		152	0.0104
		156	0.0568
15	INU055	210	0.2616
		214	0.0520
		218	0.6840
		220	0.0024
16	LEI004	83	0.0016
		85	0.0128
		95	0.4928
		97	0.4928
17	REN105L03	227	0.2616
		231	0.0064
		233	0.6224
		237	0.0008
		241	0.1080
		245	0.0008
18	REN162C04	202	0.3576
		204	0.6200
		206	0.0224
19	REN169D01	202	0.2272
		210	0.0008
		212	0.5168
		216	0.1112
		218	0.0008
		220	0.1432
20	REN169O18	160	0.0040
		162	0.6968
		164	0.2880
		166	0.0104
		170	0.0008
21	REN247M23	266	0.0976
		268	0.2560
		270	0.5888
		276	0.0568
		278	0.0008
22	REN54P11	226	0.2488
		232	0.0048
		234	0.6568
		236	0.0880
		240	0.0008
		242	0.0008
23	REN64E19	139	0.0680
		143	0.2168
		145	0.0568
		149	0.5112
		153	0.1472
24	VGL0760	12	0.2528
		13	0.0032
		14	0.0544
		21.2	0.1632
		22.2	0.0256
		23.2	0.2880
		24.2	0.1664
		25.2	0.0432
		26.2	0.0032
25	VGL0910	13	0.2056
		14	0.0288
		16.1	0.0200
		18.1	0.0008
		20.1	0.0032
		21.1	0.1448
		22.1	0.5632
		23.1	0.0336
26	VGL1063	12	0.0008
		13	0.8880
		14	0.0184
		15	0.0776
		16	0.0136
		17	0.0016
27	VGL1165	13	0.0016
		14	0.1328
		19	0.3840
		21	0.0600
		25	0.0048
		26	0.1952
		28	0.0024
		29	0.1680
		30	0.0496
		31	0.0016
28	VGL1828	16	0.0560
		17	0.5656
		18	0.0176
		19	0.0056
		20	0.1056
		21	0.0144
		22	0.2352
29	VGL2009	11	0.1920
		12	0.3248
		13	0.3392
		15	0.0056
		16	0.1376
		17	0.0008
30	VGL2409	12	0.0008
		15	0.0288
		16	0.0008
		17	0.9024
		18	0.0544
		19	0.0128
31	VGL2918	12	0.0024
		13	0.1968
		14	0.1592
		15	0.0072
		21.3	0.0296
		22.3	0.5968
		23.3	0.0080
32	VGL3008	12	0.0016
		15	0.1480
		16	0.4752
		17	0.0456
		18	0.0008
		19	0.1944
		20	0.1168
		21	0.0136
		23	0.0040
33	VGL3235	12	0.6608
		13	0.0032
		14	0.3320
		15	0.0016
		16	0.0016
		18	0.0008

Standard genetic assessment based on 33 autosomal STR loci

Alaskan Klee Kai

		N	Na	Ne	Ho	He	F
	Mean	625	5.667	2.659	0.574	0.573	0.003
	SE		0.283	0.163	0.029	0.028	0.005

Standard genetic assessment based on 7 STRs in the DLA region

Alaskan Klee Kai

		N	Na	Ne	Ho	He	F
	Mean	625	5.143	3.116	0.645	0.671	0.041
	SE		0.374	0.179	0.021	0.020	0.005

Standard genetic assessment for individual STR loci

Alaskan Klee Kai

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	625	7	3.149	0.693	0.682	-0.015
2	AHT137	625	6	4.884	0.810	0.795	-0.018
3	AHTH130	625	6	4.352	0.790	0.770	-0.026
4	AHTh171-A	625	4	2.112	0.528	0.526	-0.003
5	AHTh260	625	5	3.073	0.688	0.675	-0.020
6	AHTk211	625	5	3.218	0.698	0.689	-0.012
7	AHTk253	625	4	2.976	0.662	0.664	0.002
8	C22.279	625	4	2.783	0.619	0.641	0.034
9	FH2001	625	5	2.304	0.563	0.566	0.005
10	FH2054	625	6	3.177	0.693	0.685	-0.011
11	FH2848	625	4	2.638	0.634	0.621	-0.020
12	INRA21	625	3	1.133	0.110	0.117	0.058
13	INU005	625	5	2.155	0.531	0.536	0.009
14	INU030	625	5	2.040	0.509	0.510	0.002
15	INU055	625	4	1.855	0.450	0.461	0.025
16	LEI004	625	4	2.058	0.510	0.514	0.007
17	REN105L03	625	6	2.139	0.515	0.532	0.032
18	REN162C04	625	3	1.950	0.483	0.487	0.008
19	REN169D01	625	6	2.844	0.645	0.648	0.006
20	REN169O18	625	5	1.759	0.424	0.431	0.017
21	REN247M23	625	5	2.353	0.528	0.575	0.082
22	REN54P11	625	6	1.996	0.522	0.499	-0.045
23	REN64E19	625	5	2.960	0.672	0.662	-0.015
24	VGL0760	625	9	4.838	0.810	0.793	-0.021
25	VGL0910	625	8	2.612	0.610	0.617	0.012
26	VGL1063	625	6	1.258	0.190	0.205	0.071
27	VGL1165	625	10	4.210	0.763	0.762	-0.001
28	VGL1828	625	7	2.564	0.630	0.610	-0.034
29	VGL2009	625	6	3.618	0.723	0.724	0.001
30	VGL2409	625	6	1.222	0.178	0.182	0.023
31	VGL2918	625	7	2.374	0.606	0.579	-0.048
32	VGL3008	625	9	3.317	0.701	0.699	-0.003
33	VGL3235	625	6	1.828	0.453	0.453	0.001

Standard genetic assessment for 7 STRs in the DLA region

Alaskan Klee Kai

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	625	7	3.712	0.710	0.731	0.028
2	DLA I-4ACA	625	4	2.520	0.566	0.603	0.061
3	DLA I-4BCT	625	5	2.842	0.613	0.648	0.055
4	DLA1131	625	5	3.696	0.701	0.729	0.039
5	5ACA	625	5	3.222	0.670	0.690	0.028
6	5ACT	625	4	2.486	0.568	0.598	0.050
7	5BCA	625	6	3.337	0.683	0.700	0.024

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Alaskan Klee Kai

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Alaskan Klee Kai

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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