Statistics and Breed-wide Allele Frequency - Alaskan Klee Kai

Updated Sep 28, 2020

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Alaskan Klee Kai (n=578)
1008	386 373 289 182	0.0588
1011	376 365 281 180	0.0588
1014	375 373 287 178	0.3754
1040	380 371 277 186	0.2111
1060	380 365 277 183	0.0078
1061	380 365 281 183	0.0450
1062	382 371 277 183	0.2180
1063	382 373 289 182	0.0095
1064	389 375 293 180	0.0130
1072	376 365 277 183	0.0017
1113	382 371 289 182	0.0009

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Alaskan Klee Kai (n=578)
2007	351 327 280	0.0130
2012	345 322 280	0.0623
2014	339 322 284	0.0692
2021	339 324 268	0.2163
2037	341 327 280	0.3754
2042	341 324 286	0.0450
2043	343 324 296	0.2189

Allele Frequencies

#	Locus Name	Allele	Alaskan Klee Kai (n=578)
1	AHT121	94	0.2128
		96	0.0009
		100	0.1220
		102	0.1920
		104	0.0017
		106	0.4689
		112	0.0017
2	AHT137	131	0.0848
		145	0.1505
		147	0.2413
		149	0.1747
		151	0.0597
		153	0.2889
3	AHTH130	113	0.1678
		121	0.0009
		125	0.2266
		127	0.2353
		129	0.3010
		131	0.0683
4	AHTh171-A	217	0.0009
		219	0.6142
		233	0.2872
		235	0.0978
5	AHTh260	242	0.1047
		244	0.4680
		246	0.2647
		248	0.0112
		252	0.1514
6	AHTk211	89	0.3720
		91	0.2405
		93	0.3365
		95	0.0510
7	AHTk253	286	0.0009
		288	0.3564
		290	0.3581
		292	0.2846
8	C22.279	118	0.4567
		124	0.3106
		126	0.2318
		132	0.0009
9	FH2001	124	0.0009
		136	0.3676
		140	0.0753
		144	0.5407
		148	0.0156
10	FH2054	152	0.4048
		156	0.3564
		160	0.0311
		168	0.0744
		172	0.1315
		176	0.0017
11	FH2848	232	0.4291
		238	0.1531
		240	0.4161
		242	0.0017
12	INRA21	95	0.0017
		97	0.9351
		101	0.0631
13	INU005	110	0.0631
		118	0.0009
		122	0.2180
		124	0.6332
		126	0.0848
14	INU030	144	0.6341
		148	0.2950
		150	0.0035
		152	0.0095
		156	0.0580
15	INU055	210	0.2535
		214	0.0476
		218	0.6972
		220	0.0017
16	LEI004	83	0.0017
		85	0.0138
		95	0.4974
		97	0.4870
17	REN105L03	227	0.2587
		231	0.0061
		233	0.6211
		241	0.1133
		245	0.0009
18	REN162C04	202	0.3590
		204	0.6176
		206	0.0234
19	REN169D01	202	0.2284
		210	0.0009
		212	0.5216
		216	0.1090
		218	0.0009
		220	0.1393
20	REN169O18	160	0.0043
		162	0.6990
		164	0.2846
		166	0.0112
		170	0.0009
21	REN247M23	266	0.0900
		268	0.2569
		270	0.5952
		276	0.0580
22	REN54P11	226	0.2509
		232	0.0052
		234	0.6540
		236	0.0900
23	REN64E19	139	0.0666
		143	0.2171
		145	0.0588
		149	0.5112
		153	0.1462
24	VGL0760	12	0.2578
		13	0.0026
		14	0.0554
		21.2	0.1583
		22.2	0.0242
		23.2	0.2881
		24.2	0.1661
		25.2	0.0441
		26.2	0.0035
25	VGL0910	13	0.2050
		14	0.0242
		16.1	0.0208
		18.1	0.0009
		20.1	0.0035
		21.1	0.1445
		22.1	0.5666
		23.1	0.0346
26	VGL1063	12	0.0009
		13	0.8953
		14	0.0182
		15	0.0709
		16	0.0130
		17	0.0017
27	VGL1165	13	0.0017
		14	0.1324
		19	0.3867
		21	0.0588
		25	0.0052
		26	0.1955
		28	0.0026
		29	0.1670
		30	0.0493
		31	0.0009
28	VGL1828	16	0.0545
		17	0.5787
		18	0.0156
		19	0.0052
		20	0.1064
		21	0.0104
		22	0.2292
29	VGL2009	11	0.1955
		12	0.3166
		13	0.3382
		15	0.0061
		16	0.1427
		17	0.0009
30	VGL2409	12	0.0009
		15	0.0260
		16	0.0009
		17	0.9057
		18	0.0528
		19	0.0138
31	VGL2918	12	0.0026
		13	0.1990
		14	0.1600
		15	0.0069
		21.3	0.0311
		22.3	0.5926
		23.3	0.0078
32	VGL3008	12	0.0009
		15	0.1522
		16	0.4775
		17	0.0450
		18	0.0009
		19	0.1894
		20	0.1151
		21	0.0147
		23	0.0043
33	VGL3235	12	0.6548
		13	0.0035
		14	0.3374
		15	0.0017
		16	0.0017
		18	0.0009

Standard genetic assessment based on 33 autosomal STR loci

		N	Na	Ne	Ho	He	F
Alaskan Klee Kai	Mean	578	5.515	2.654	0.573	0.572	0.003
	SE		0.294	0.162	0.029	0.028	0.006

Standard genetic assessment based on 7 STRs in the DLA region

		N	Na	Ne	Ho	He	F
Alaskan Klee Kai	Mean	578	4.714	3.118	0.654	0.672	0.027
	SE		0.333	0.175	0.021	0.019	0.006

Standard genetic assessment for individual STR loci

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	578	7	3.156	0.697	0.683	-0.021
2	AHT137	578	6	4.862	0.813	0.794	-0.024
3	AHTH130	578	6	4.344	0.798	0.770	-0.036
4	AHTh171-A	578	4	2.131	0.526	0.531	0.009
5	AHTh260	578	5	3.095	0.697	0.677	-0.030
6	AHTk211	578	4	3.205	0.690	0.688	-0.003
7	AHTk253	578	4	2.974	0.663	0.664	0.002
8	C22.279	578	4	2.787	0.623	0.641	0.029
9	FH2001	578	5	2.307	0.566	0.567	0.002
10	FH2054	578	6	3.177	0.689	0.685	-0.005
11	FH2848	578	4	2.627	0.645	0.619	-0.042
12	INRA21	578	3	1.138	0.114	0.122	0.061
13	INU005	578	5	2.176	0.536	0.540	0.007
14	INU030	578	5	2.030	0.502	0.507	0.011
15	INU055	578	4	1.809	0.436	0.447	0.025
16	LEI004	578	4	2.063	0.505	0.515	0.019
17	REN105L03	578	5	2.148	0.514	0.534	0.039
18	REN162C04	578	3	1.957	0.488	0.489	0.002
19	REN169D01	578	6	2.813	0.644	0.644	0.001
20	REN169O18	578	5	1.755	0.415	0.430	0.035
21	REN247M23	578	4	2.317	0.516	0.568	0.093
22	REN54P11	578	4	2.005	0.524	0.501	-0.046
23	REN64E19	578	5	2.960	0.676	0.662	-0.022
24	VGL0760	578	9	4.815	0.808	0.792	-0.020
25	VGL0910	578	8	2.589	0.607	0.614	0.011
26	VGL1063	578	6	1.239	0.178	0.193	0.076
27	VGL1165	578	10	4.183	0.753	0.761	0.011
28	VGL1828	578	7	2.487	0.618	0.598	-0.033
29	VGL2009	578	6	3.659	0.727	0.727	0.000
30	VGL2409	578	6	1.214	0.175	0.176	0.007
31	VGL2918	578	7	2.396	0.611	0.583	-0.048
32	VGL3008	578	9	3.305	0.692	0.697	0.008
33	VGL3235	578	6	1.843	0.460	0.457	-0.006

Standard genetic assessment for 7 STRs in the DLA region

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	578	6	3.704	0.723	0.730	0.009
2	DLA I-4ACA	578	4	2.533	0.576	0.605	0.048
3	DLA I-4BCT	578	5	2.865	0.621	0.651	0.046
4	DLA1131	578	5	3.708	0.711	0.730	0.026
5	5ACA	578	5	3.224	0.680	0.690	0.014
6	5ACT	578	3	2.508	0.580	0.601	0.036
7	5BCA	578	5	3.283	0.689	0.695	0.010

Veterinary Genetics Laboratory

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Statistics and Breed-wide Allele Frequency - Alaskan Klee Kai

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Alaskan Klee Kai

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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