Statistics and Breed-wide Allele Frequency - Alaskan Klee Kai

Updated Sep 28, 2020

DLA Class I Haplotype Frequencies

DLA1 #STR typesAlaskan Klee Kai (n=578)
1008386 373 289 1820.0588
1011376 365 281 1800.0588
1014375 373 287 1780.3754
1040380 371 277 1860.2111
1060380 365 277 1830.0078
1061380 365 281 1830.0450
1062382 371 277 1830.2180
1063382 373 289 1820.0095
1064389 375 293 1800.0130
1072376 365 277 1830.0017
1113382 371 289 1820.0009

DLA Class II Haplotype Frequencies

DLA2 #STR typesAlaskan Klee Kai (n=578)
2007351 327 2800.0130
2012345 322 2800.0623
2014339 322 2840.0692
2021339 324 2680.2163
2037341 327 2800.3754
2042341 324 2860.0450
2043343 324 2960.2189

Allele Frequencies

#Locus NameAlleleAlaskan Klee Kai (n=578)
1AHT121 940.2128
960.0009
1000.1220
1020.1920
1040.0017
1060.4689
1120.0017
2AHT137 1310.0848
1450.1505
1470.2413
1490.1747
1510.0597
1530.2889
3AHTH130 1130.1678
1210.0009
1250.2266
1270.2353
1290.3010
1310.0683
4AHTh171-A 2170.0009
2190.6142
2330.2872
2350.0978
5AHTh260 2420.1047
2440.4680
2460.2647
2480.0112
2520.1514
6AHTk211 890.3720
910.2405
930.3365
950.0510
7AHTk253 2860.0009
2880.3564
2900.3581
2920.2846
8C22.279 1180.4567
1240.3106
1260.2318
1320.0009
9FH2001 1240.0009
1360.3676
1400.0753
1440.5407
1480.0156
10FH2054 1520.4048
1560.3564
1600.0311
1680.0744
1720.1315
1760.0017
11FH2848 2320.4291
2380.1531
2400.4161
2420.0017
12INRA21 950.0017
970.9351
1010.0631
13INU005 1100.0631
1180.0009
1220.2180
1240.6332
1260.0848
14INU030 1440.6341
1480.2950
1500.0035
1520.0095
1560.0580
15INU055 2100.2535
2140.0476
2180.6972
2200.0017
16LEI004 830.0017
850.0138
950.4974
970.4870
17REN105L03 2270.2587
2310.0061
2330.6211
2410.1133
2450.0009
18REN162C04 2020.3590
2040.6176
2060.0234
19REN169D01 2020.2284
2100.0009
2120.5216
2160.1090
2180.0009
2200.1393
20REN169O18 1600.0043
1620.6990
1640.2846
1660.0112
1700.0009
21REN247M23 2660.0900
2680.2569
2700.5952
2760.0580
22REN54P11 2260.2509
2320.0052
2340.6540
2360.0900
23REN64E19 1390.0666
1430.2171
1450.0588
1490.5112
1530.1462
24VGL0760 120.2578
130.0026
140.0554
21.20.1583
22.20.0242
23.20.2881
24.20.1661
25.20.0441
26.20.0035
25VGL0910 130.2050
140.0242
16.10.0208
18.10.0009
20.10.0035
21.10.1445
22.10.5666
23.10.0346
26VGL1063 120.0009
130.8953
140.0182
150.0709
160.0130
170.0017
27VGL1165 130.0017
140.1324
190.3867
210.0588
250.0052
260.1955
280.0026
290.1670
300.0493
310.0009
28VGL1828 160.0545
170.5787
180.0156
190.0052
200.1064
210.0104
220.2292
29VGL2009 110.1955
120.3166
130.3382
150.0061
160.1427
170.0009
30VGL2409 120.0009
150.0260
160.0009
170.9057
180.0528
190.0138
31VGL2918 120.0026
130.1990
140.1600
150.0069
21.30.0311
22.30.5926
23.30.0078
32VGL3008 120.0009
150.1522
160.4775
170.0450
180.0009
190.1894
200.1151
210.0147
230.0043
33VGL3235 120.6548
130.0035
140.3374
150.0017
160.0017
180.0009

Standard genetic assessment based on 33 autosomal STR loci

  NNaNeHoHeF
Alaskan Klee KaiMean5785.5152.6540.5730.5720.003
 SE 0.2940.1620.0290.0280.006

Standard genetic assessment based on 7 STRs in the DLA region

  NNaNeHoHeF
Alaskan Klee KaiMean5784.7143.1180.6540.6720.027
 SE 0.3330.1750.0210.0190.006

Standard genetic assessment for individual STR loci

#LocusNNaNeHoHeF
1AHT12157873.1560.6970.683-0.021
2AHT13757864.8620.8130.794-0.024
3AHTH13057864.3440.7980.770-0.036
4AHTh171-A57842.1310.5260.5310.009
5AHTh26057853.0950.6970.677-0.030
6AHTk21157843.2050.6900.688-0.003
7AHTk25357842.9740.6630.6640.002
8C22.27957842.7870.6230.6410.029
9FH200157852.3070.5660.5670.002
10FH205457863.1770.6890.685-0.005
11FH284857842.6270.6450.619-0.042
12INRA2157831.1380.1140.1220.061
13INU00557852.1760.5360.5400.007
14INU03057852.0300.5020.5070.011
15INU05557841.8090.4360.4470.025
16LEI00457842.0630.5050.5150.019
17REN105L0357852.1480.5140.5340.039
18REN162C0457831.9570.4880.4890.002
19REN169D0157862.8130.6440.6440.001
20REN169O1857851.7550.4150.4300.035
21REN247M2357842.3170.5160.5680.093
22REN54P1157842.0050.5240.501-0.046
23REN64E1957852.9600.6760.662-0.022
24VGL076057894.8150.8080.792-0.020
25VGL091057882.5890.6070.6140.011
26VGL106357861.2390.1780.1930.076
27VGL1165578104.1830.7530.7610.011
28VGL182857872.4870.6180.598-0.033
29VGL200957863.6590.7270.7270.000
30VGL240957861.2140.1750.1760.007
31VGL291857872.3960.6110.583-0.048
32VGL300857893.3050.6920.6970.008
33VGL323557861.8430.4600.457-0.006

Standard genetic assessment for 7 STRs in the DLA region

#LocusNNaNeHoHeF
1DLA I-3CCA57863.7040.7230.7300.009
2DLA I-4ACA57842.5330.5760.6050.048
3DLA I-4BCT57852.8650.6210.6510.046
4DLA113157853.7080.7110.7300.026
55ACA57853.2240.6800.6900.014
65ACT57832.5080.5800.6010.036
75BCA57853.2830.6890.6950.010