Statistics and Breed-wide Allele Frequency - Alaskan Klee Kai

Updated May 28, 2023

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Alaskan Klee Kai (n=649)
1008	386 373 289 182	0.0562
1011	376 365 281 180	0.0547
1014	375 373 287 178	0.3713
1040	380 371 277 186	0.2126
1060	380 365 277 183	0.0077
1061	380 365 281 183	0.0447
1062	382 371 277 183	0.2296
1063	382 373 289 182	0.0085
1064	389 375 293 180	0.0116
1072	376 365 277 183	0.0023
1113	382 371 289 182	0.0008

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Alaskan Klee Kai (n=649)
2007	351 327 280	0.0116
2012	345 322 280	0.0578
2014	339 322 284	0.0655
2021	339 324 268	0.2265
2037	341 327 280	0.3713
2042	341 324 286	0.0447
2043	343 324 296	0.2227

Allele Frequencies

#	Locus Name	Allele	Alaskan Klee Kai (n=650)
1	AHT121	94	0.2192
		96	0.0008
		100	0.1138
		102	0.1992
		104	0.0015
		106	0.4638
		112	0.0015
2	AHT137	131	0.0885
		145	0.1485
		147	0.2446
		149	0.1831
		151	0.0538
		153	0.2815
3	AHTH130	113	0.1638
		121	0.0023
		125	0.2200
		127	0.2415
		129	0.3023
		131	0.0700
4	AHTh171-A	217	0.0008
		219	0.6231
		233	0.2792
		235	0.0969
5	AHTh260	242	0.0992
		244	0.4669
		246	0.2700
		248	0.0100
		252	0.1538
6	AHTk211	87	0.0008
		89	0.3692
		91	0.2392
		93	0.3369
		95	0.0538
7	AHTk253	286	0.0008
		288	0.3485
		290	0.3585
		292	0.2923
8	C22.279	118	0.4577
		124	0.3162
		126	0.2254
		132	0.0008
9	FH2001	124	0.0015
		136	0.3623
		140	0.0762
		144	0.5454
		148	0.0146
10	FH2054	152	0.4046
		156	0.3562
		160	0.0315
		168	0.0708
		172	0.1354
		176	0.0015
11	FH2848	232	0.4300
		238	0.1569
		240	0.4108
		242	0.0023
12	INRA21	95	0.0015
		97	0.9385
		101	0.0600
13	INU005	110	0.0638
		118	0.0008
		122	0.2169
		124	0.6385
		126	0.0800
14	INU030	144	0.6315
		148	0.2985
		150	0.0031
		152	0.0100
		156	0.0569
15	INU055	210	0.2600
		214	0.0515
		218	0.6862
		220	0.0023
16	LEI004	83	0.0015
		85	0.0123
		95	0.4938
		97	0.4923
17	REN105L03	227	0.2615
		231	0.0062
		233	0.6254
		237	0.0008
		241	0.1054
		245	0.0008
18	REN162C04	200	0.0008
		202	0.3585
		204	0.6192
		206	0.0215
19	REN169D01	202	0.2277
		210	0.0008
		212	0.5192
		216	0.1077
		218	0.0008
		220	0.1438
20	REN169O18	160	0.0038
		162	0.7023
		164	0.2831
		166	0.0100
		170	0.0008
21	REN247M23	266	0.0985
		268	0.2538
		270	0.5885
		276	0.0585
		278	0.0008
22	REN54P11	226	0.2531
		232	0.0046
		234	0.6554
		236	0.0854
		240	0.0008
		242	0.0008
23	REN64E19	139	0.0685
		143	0.2215
		145	0.0554
		149	0.5115
		153	0.1431
24	VGL0760	12	0.2562
		13	0.0031
		14	0.0554
		20.2	0.0008
		21.2	0.1608
		22.2	0.0269
		23.2	0.2838
		24.2	0.1669
		25.2	0.0431
		26.2	0.0031
25	VGL0910	13	0.2054
		14	0.0292
		16.1	0.0192
		18.1	0.0008
		20.1	0.0031
		21.1	0.1454
		22.1	0.5615
		23.1	0.0354
26	VGL1063	12	0.0008
		13	0.8892
		14	0.0192
		15	0.0754
		16	0.0138
		17	0.0015
27	VGL1165	13	0.0015
		14	0.1285
		19	0.3869
		21	0.0600
		25	0.0046
		26	0.1938
		28	0.0023
		29	0.1715
		30	0.0492
		31	0.0015
28	VGL1828	16	0.0577
		17	0.5662
		18	0.0185
		19	0.0054
		20	0.1038
		21	0.0138
		22	0.2346
29	VGL2009	11	0.1892
		12	0.3300
		13	0.3385
		15	0.0062
		16	0.1354
		17	0.0008
30	VGL2409	12	0.0008
		15	0.0292
		16	0.0008
		17	0.9023
		18	0.0546
		19	0.0123
31	VGL2918	12	0.0023
		13	0.1962
		14	0.1608
		15	0.0077
		21.3	0.0300
		22.3	0.5954
		23.3	0.0077
32	VGL3008	12	0.0015
		15	0.1446
		16	0.4785
		17	0.0469
		18	0.0015
		19	0.1954
		20	0.1146
		21	0.0131
		23	0.0038
33	VGL3235	12	0.6615
		13	0.0031
		14	0.3315
		15	0.0015
		16	0.0015
		18	0.0008

Standard genetic assessment based on 33 autosomal STR loci

Alaskan Klee Kai

		N	Na	Ne	Ho	He	F
	Mean	650	5.727	2.656	0.574	0.573	0.001
	SE		0.288	0.163	0.029	0.028	0.005

Standard genetic assessment based on 7 STRs in the DLA region

Alaskan Klee Kai

		N	Na	Ne	Ho	He	F
	Mean	650	5.143	3.097	0.642	0.669	0.042
	SE		0.374	0.179	0.023	0.020	0.007

Standard genetic assessment for individual STR loci

Alaskan Klee Kai

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	650	7	3.166	0.694	0.684	-0.014
2	AHT137	650	6	4.869	0.814	0.795	-0.024
3	AHTH130	650	6	4.350	0.789	0.770	-0.025
4	AHTh171-A	650	4	2.103	0.529	0.524	-0.009
5	AHTh260	650	5	3.081	0.697	0.675	-0.032
6	AHTk211	650	5	3.226	0.703	0.690	-0.019
7	AHTk253	650	4	2.982	0.662	0.665	0.005
8	C22.279	650	4	2.776	0.612	0.640	0.043
9	FH2001	650	5	2.300	0.555	0.565	0.017
10	FH2054	650	6	3.176	0.694	0.685	-0.013
11	FH2848	650	4	2.644	0.640	0.622	-0.029
12	INRA21	650	3	1.131	0.109	0.116	0.056
13	INU005	650	5	2.150	0.532	0.535	0.005
14	INU030	650	5	2.036	0.509	0.509	-0.001
15	INU055	650	4	1.848	0.443	0.459	0.035
16	LEI004	650	4	2.056	0.518	0.514	-0.009
17	REN105L03	650	6	2.125	0.515	0.529	0.026
18	REN162C04	650	4	1.952	0.486	0.488	0.003
19	REN169D01	650	6	2.827	0.648	0.646	-0.002
20	REN169O18	650	5	1.744	0.420	0.427	0.015
21	REN247M23	650	5	2.359	0.532	0.576	0.076
22	REN54P11	650	6	1.996	0.522	0.499	-0.045
23	REN64E19	650	5	2.950	0.669	0.661	-0.012
24	VGL0760	650	10	4.865	0.808	0.794	-0.017
25	VGL0910	650	8	2.624	0.614	0.619	0.008
26	VGL1063	650	6	1.255	0.189	0.203	0.068
27	VGL1165	650	10	4.179	0.758	0.761	0.003
28	VGL1828	650	7	2.562	0.632	0.610	-0.037
29	VGL2009	650	6	3.602	0.720	0.722	0.003
30	VGL2409	650	6	1.222	0.178	0.182	0.019
31	VGL2918	650	7	2.382	0.605	0.580	-0.042
32	VGL3008	650	9	3.294	0.700	0.696	-0.005
33	VGL3235	650	6	1.826	0.451	0.452	0.004

Standard genetic assessment for 7 STRs in the DLA region

Alaskan Klee Kai

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	650	7	3.686	0.711	0.729	0.025
2	DLA I-4ACA	650	4	2.509	0.560	0.601	0.069
3	DLA I-4BCT	650	5	2.811	0.605	0.644	0.062
4	DLA1131	650	5	3.668	0.702	0.727	0.035
5	5ACA	650	5	3.211	0.671	0.689	0.026
6	5ACT	650	4	2.468	0.562	0.595	0.056
7	5BCA	650	6	3.327	0.683	0.699	0.023

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Alaskan Klee Kai

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Alaskan Klee Kai

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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