Statistics and Breed-wide Allele Frequency - Alaskan Klee Kai

Updated Aug 9, 2020

DLA Class I Haplotype Frequencies

DLA1 #STR typesAlaskan Klee Kai (n=571)
1008386 373 289 1820.0595
1011376 365 281 1800.0587
1014375 373 287 1780.3792
1040380 371 277 1860.2102
1060380 365 277 1830.0079
1061380 365 281 1830.0455
1062382 371 277 1830.2137
1063382 373 289 1820.0096
1064389 375 293 1800.0131
1072376 365 277 1830.0018
1113382 371 289 1820.0009

DLA Class II Haplotype Frequencies

DLA2 #STR typesAlaskan Klee Kai (n=571)
2007351 327 2800.0131
2012345 322 2800.0622
2014339 322 2840.0701
2021339 324 2680.2119
2037341 327 2800.3792
2042341 324 2860.0455
2043343 324 2960.2180

Allele Frequencies

#Locus NameAlleleAlaskan Klee Kai (n=571)
1AHT121 940.2154
960.0009
1000.1235
1020.1900
1040.0018
1060.4667
1120.0018
2AHT137 1310.0858
1450.1506
1470.2408
1490.1760
1510.0604
1530.2863
3AHTH130 1130.1655
1210.0009
1250.2285
1270.2347
1290.3012
1310.0692
4AHTh171-A 2170.0009
2190.6138
2330.2863
2350.0989
5AHTh260 2420.1033
2440.4720
2460.2644
2480.0088
2520.1515
6AHTk211 890.3748
910.2364
930.3371
950.0517
7AHTk253 2860.0009
2880.3564
2900.3555
2920.2872
8C22.279 1180.4588
1240.3109
1260.2294
1320.0009
9FH2001 1240.0009
1360.3651
1400.0762
1440.5420
1480.0158
10FH2054 1520.4011
1560.3573
1600.0315
1680.0753
1720.1331
1760.0018
11FH2848 2320.4247
2380.1541
2400.4194
2420.0018
12INRA21 950.0018
970.9343
1010.0639
13INU005 1100.0639
1180.0009
1220.2207
1240.6322
1260.0823
14INU030 1440.6357
1480.2925
1500.0035
1520.0096
1560.0587
15INU055 2100.2539
2140.0482
2180.6961
2200.0018
16LEI004 830.0018
850.0140
950.4991
970.4851
17REN105L03 2270.2592
2310.0061
2330.6191
2410.1147
2450.0009
18REN162C04 2020.3590
2040.6173
2060.0236
19REN169D01 2020.2268
2100.0009
2120.5263
2160.1051
2180.0009
2200.1401
20REN169O18 1600.0044
1620.6961
1640.2872
1660.0114
1700.0009
21REN247M23 2660.0902
2680.2566
2700.5946
2760.0587
22REN54P11 2260.2531
2320.0053
2340.6506
2360.0911
23REN64E19 1390.0665
1430.2198
1450.0560
1490.5105
1530.1471
24VGL0760 120.2557
130.0026
140.0560
21.20.1594
22.20.0228
23.20.2881
24.20.1681
25.20.0438
26.20.0035
25VGL0910 130.2058
140.0245
16.10.0210
18.10.0009
20.10.0035
21.10.1427
22.10.5674
23.10.0342
26VGL1063 120.0009
130.8940
140.0184
150.0718
160.0131
170.0018
27VGL1165 130.0018
140.1340
190.3862
210.0587
250.0053
260.1970
280.0026
290.1646
300.0490
310.0009
28VGL1828 160.0552
170.5788
180.0158
190.0053
200.1077
210.0105
220.2268
29VGL2009 110.1961
120.3205
130.3327
150.0061
160.1436
170.0009
30VGL2409 120.0009
150.0263
160.0009
170.9081
180.0534
190.0105
31VGL2918 120.0026
130.2005
140.1602
150.0070
21.30.0315
22.30.5928
23.30.0053
32VGL3008 120.0009
150.1515
160.4807
170.0455
180.0009
190.1883
200.1130
210.0149
230.0044
33VGL3235 120.6559
130.0026
140.3371
150.0018
160.0018
180.0009

Standard genetic assessment based on 33 autosomal STR loci

  NNaNeHoHeF
Alaskan Klee KaiMean5715.5152.6540.5720.5720.004
 SE 0.2940.1630.0290.0280.006

Standard genetic assessment based on 7 STRs in the DLA region

  NNaNeHoHeF
Alaskan Klee KaiMean5714.7143.1140.6570.6720.023
 SE 0.3330.1730.0210.0190.006

Standard genetic assessment for individual STR loci

#LocusNNaNeHoHeF
1AHT12157173.1690.6970.684-0.018
2AHT13757164.8860.8110.795-0.020
3AHTH13057164.3440.7950.770-0.033
4AHTh171-A57142.1340.5240.5310.015
5AHTh26057153.0640.6940.674-0.030
6AHTk21157143.1980.6900.687-0.004
7AHTk25357142.9770.6650.664-0.002
8C22.27957142.7790.6200.6400.032
9FH200157152.3080.5660.5670.002
10FH205457163.1960.6900.687-0.004
11FH284857142.6310.6500.620-0.048
12INRA2157131.1400.1160.1230.060
13INU00557152.1770.5360.5410.009
14INU03057152.0270.4990.5070.015
15INU05557141.8130.4360.4490.028
16LEI00457142.0630.5030.5150.025
17REN105L0357152.1570.5150.5360.040
18REN162C0457131.9590.4850.4890.009
19REN169D0157162.7850.6410.641-0.000
20REN169O1857151.7630.4190.4330.033
21REN247M2357142.3210.5170.5690.092
22REN54P1157142.0180.5290.504-0.049
23REN64E1957152.9570.6760.662-0.021
24VGL076057194.8160.8070.792-0.019
25VGL091057182.5850.6060.6130.012
26VGL106357161.2420.1800.1950.075
27VGL1165571104.1860.7510.7610.013
28VGL182857172.4910.6150.599-0.027
29VGL200957163.6690.7300.727-0.004
30VGL240957161.2070.1700.1720.011
31VGL291857172.3900.6090.582-0.048
32VGL300857193.2830.6880.6950.010
33VGL323557161.8390.4590.456-0.006

Standard genetic assessment for 7 STRs in the DLA region

#LocusNNaNeHoHeF
1DLA I-3CCA57163.6920.7250.7290.006
2DLA I-4ACA57142.5350.5800.6050.043
3DLA I-4BCT57152.8770.6250.6520.042
4DLA113157153.7000.7130.7300.023
55ACA57153.2110.6810.6890.011
65ACT57132.5160.5830.6030.032
75BCA57153.2680.6900.6940.006