Statistics and Breed-wide Allele Frequency - Alaskan Klee Kai

Updated Nov 25, 2024

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Alaskan Klee Kai (n=659)
1008	386 373 289 182	0.0577
1011	376 365 281 180	0.0539
1014	375 373 287 178	0.3718
1040	380 371 277 186	0.2124
1060	380 365 277 183	0.0076
1061	380 365 281 183	0.0448
1062	382 371 277 183	0.2291
1063	382 373 289 182	0.0083
1064	389 375 293 180	0.0114
1072	376 365 277 183	0.0023
1113	382 371 289 182	0.0008

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Alaskan Klee Kai (n=659)
2007	351 327 280	0.0114
2012	345 322 280	0.0569
2014	339 322 284	0.0668
2021	339 324 268	0.2261
2037	341 327 280	0.3718
2042	341 324 286	0.0448
2043	343 324 296	0.2223

Allele Frequencies

#	Locus Name	Allele	Alaskan Klee Kai (n=660)
1	AHT121	94	0.2167
		96	0.0008
		100	0.1136
		102	0.2000
		104	0.0015
		106	0.4659
		112	0.0015
2	AHT137	131	0.0879
		145	0.1477
		147	0.2485
		149	0.1811
		151	0.0538
		153	0.2811
3	AHTH130	113	0.1644
		121	0.0023
		125	0.2205
		127	0.2447
		129	0.2985
		131	0.0697
4	AHTh171-A	217	0.0008
		219	0.6227
		233	0.2811
		235	0.0955
5	AHTh260	242	0.0985
		244	0.4705
		246	0.2682
		248	0.0106
		252	0.1523
6	AHTk211	87	0.0008
		89	0.3735
		91	0.2356
		93	0.3364
		95	0.0538
7	AHTk253	286	0.0008
		288	0.3470
		290	0.3591
		292	0.2932
8	C22.279	118	0.4561
		124	0.3182
		126	0.2250
		132	0.0008
9	FH2001	124	0.0015
		136	0.3621
		140	0.0750
		144	0.5462
		148	0.0152
10	FH2054	152	0.4030
		156	0.3568
		160	0.0318
		168	0.0705
		172	0.1364
		176	0.0015
11	FH2848	232	0.4311
		238	0.1583
		240	0.4083
		242	0.0023
12	INRA21	95	0.0015
		97	0.9386
		101	0.0598
13	INU005	110	0.0629
		118	0.0008
		122	0.2197
		124	0.6371
		126	0.0795
14	INU030	144	0.6318
		148	0.2985
		150	0.0030
		152	0.0098
		156	0.0568
15	INU055	210	0.2568
		214	0.0515
		218	0.6894
		220	0.0023
16	LEI004	83	0.0015
		85	0.0121
		95	0.4924
		97	0.4939
17	REN105L03	227	0.2606
		231	0.0061
		233	0.6250
		237	0.0008
		241	0.1068
		245	0.0008
18	REN162C04	200	0.0008
		202	0.3545
		204	0.6235
		206	0.0212
19	REN169D01	202	0.2288
		210	0.0008
		212	0.5144
		216	0.1091
		218	0.0008
		220	0.1462
20	REN169O18	160	0.0038
		162	0.7015
		164	0.2841
		166	0.0098
		170	0.0008
21	REN247M23	266	0.0970
		268	0.2538
		270	0.5894
		276	0.0591
		278	0.0008
22	REN54P11	226	0.2500
		232	0.0045
		234	0.6561
		236	0.0879
		240	0.0008
		242	0.0008
23	REN64E19	139	0.0674
		143	0.2242
		145	0.0553
		149	0.5114
		153	0.1417
24	VGL0760	12	0.2538
		13	0.0030
		14	0.0553
		20.2	0.0008
		21.2	0.1621
		22.2	0.0265
		23.2	0.2826
		24.2	0.1682
		25.2	0.0447
		26.2	0.0030
25	VGL0910	13	0.2068
		14	0.0288
		16.1	0.0189
		18.1	0.0008
		20.1	0.0030
		21.1	0.1447
		22.1	0.5598
		23.1	0.0371
26	VGL1063	12	0.0008
		13	0.8902
		14	0.0189
		15	0.0742
		16	0.0144
		17	0.0015
27	VGL1165	13	0.0015
		14	0.1318
		19	0.3856
		21	0.0591
		25	0.0045
		26	0.1932
		28	0.0023
		29	0.1720
		30	0.0485
		31	0.0015
28	VGL1828	16	0.0568
		17	0.5621
		18	0.0197
		19	0.0061
		20	0.1076
		21	0.0136
		22	0.2341
29	VGL2009	11	0.1871
		12	0.3303
		13	0.3417
		15	0.0061
		16	0.1341
		17	0.0008
30	VGL2409	12	0.0008
		15	0.0295
		16	0.0008
		17	0.9023
		18	0.0545
		19	0.0121
31	VGL2918	12	0.0023
		13	0.1955
		14	0.1606
		15	0.0083
		21.3	0.0318
		22.3	0.5932
		23.3	0.0083
32	VGL3008	12	0.0015
		15	0.1439
		16	0.4765
		17	0.0462
		18	0.0015
		19	0.1985
		20	0.1136
		21	0.0144
		23	0.0038
33	VGL3235	12	0.6636
		13	0.0030
		14	0.3295
		15	0.0015
		16	0.0015
		18	0.0008

Standard genetic assessment based on 33 autosomal STR loci

Alaskan Klee Kai

		N	Na	Ne	Ho	He	F
	Mean	660	5.727	2.658	0.575	0.573	0.000
	SE		0.288	0.163	0.029	0.028	0.005

Standard genetic assessment based on 7 STRs in the DLA region

Alaskan Klee Kai

		N	Na	Ne	Ho	He	F
	Mean	660	5.143	3.097	0.642	0.669	0.042
	SE		0.374	0.179	0.023	0.020	0.006

Standard genetic assessment for individual STR loci

Alaskan Klee Kai

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	660	7	3.155	0.691	0.683	-0.011
2	AHT137	660	6	4.855	0.815	0.794	-0.027
3	AHTH130	660	6	4.358	0.791	0.771	-0.026
4	AHTh171-A	660	4	2.101	0.530	0.524	-0.012
5	AHTh260	660	5	3.065	0.694	0.674	-0.030
6	AHTk211	660	5	3.215	0.697	0.689	-0.012
7	AHTk253	660	4	2.982	0.665	0.665	-0.001
8	C22.279	660	4	2.779	0.615	0.640	0.039
9	FH2001	660	5	2.297	0.555	0.565	0.018
10	FH2054	660	6	3.181	0.697	0.686	-0.016
11	FH2848	660	4	2.648	0.639	0.622	-0.027
12	INRA21	660	3	1.130	0.109	0.115	0.054
13	INU005	660	5	2.153	0.538	0.536	-0.004
14	INU030	660	5	2.034	0.512	0.508	-0.007
15	INU055	660	4	1.839	0.438	0.456	0.040
16	LEI004	660	4	2.055	0.520	0.513	-0.012
17	REN105L03	660	6	2.128	0.518	0.530	0.022
18	REN162C04	660	4	1.942	0.482	0.485	0.007
19	REN169D01	660	6	2.855	0.652	0.650	-0.003
20	REN169O18	660	5	1.745	0.421	0.427	0.014
21	REN247M23	660	5	2.355	0.535	0.575	0.070
22	REN54P11	660	6	1.997	0.523	0.499	-0.047
23	REN64E19	660	5	2.946	0.668	0.661	-0.012
24	VGL0760	660	10	4.887	0.809	0.795	-0.017
25	VGL0910	660	8	2.634	0.618	0.620	0.003
26	VGL1063	660	6	1.252	0.188	0.202	0.068
27	VGL1165	660	10	4.187	0.759	0.761	0.003
28	VGL1828	660	7	2.589	0.636	0.614	-0.037
29	VGL2009	660	6	3.586	0.718	0.721	0.004
30	VGL2409	660	6	1.222	0.179	0.182	0.017
31	VGL2918	660	7	2.398	0.608	0.583	-0.042
32	VGL3008	660	9	3.306	0.705	0.698	-0.010
33	VGL3235	660	6	1.821	0.450	0.451	0.002

Standard genetic assessment for 7 STRs in the DLA region

Alaskan Klee Kai

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	660	7	3.686	0.711	0.729	0.025
2	DLA I-4ACA	660	4	2.504	0.561	0.601	0.067
3	DLA I-4BCT	660	5	2.814	0.606	0.645	0.060
4	DLA1131	660	5	3.668	0.700	0.727	0.038
5	5ACA	660	5	3.204	0.671	0.688	0.024
6	5ACT	660	4	2.470	0.562	0.595	0.056
7	5BCA	660	6	3.335	0.683	0.700	0.024

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Alaskan Klee Kai

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Alaskan Klee Kai

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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