Statistics and Breed-wide Allele Frequency - Berger Picard

Updated Sep 7, 2025

DLA Class I Haplotype Frequencies

DLA1 #STR typesBerger Picard (n=155)
1052380 372 289 1840.100
1227380 372 289 1860.900

DLA Class II Haplotype Frequencies

DLA2 #STR typesBerger Picard (n=155)
2017343 322 2800.100
2067343 322 2840.900

Allele Frequencies

#Locus NameAlleleBerger Picard (n=155)
1AHT121 960.068
980.432
1000.403
1020.090
1060.006
2AHT137 1310.019
1370.068
1470.742
1490.171
3AHTH130 1210.132
1230.203
1270.003
1310.500
1370.158
1450.003
4AHTh171-A 2191.000
5AHTh260 2420.606
2440.239
2480.155
6AHTk211 910.294
950.135
970.571
7AHTk253 2840.739
2860.013
2880.097
2920.152
8C22.279 1160.281
1180.694
1240.026
9FH2001 1320.065
1440.071
1480.084
1520.774
1560.006
10FH2054 1560.039
1640.103
1680.016
1720.358
1760.477
1800.006
11FH2848 2360.477
2380.416
2400.106
12INRA21 950.297
970.290
1010.413
13INU005 1100.297
1220.503
1260.200
14INU030 1440.013
1460.090
1500.897
15INU055 2100.968
2140.010
2200.023
16LEI004 850.465
950.535
17REN105L03 2330.858
2410.142
18REN162C04 2000.019
2060.790
2080.190
19REN169D01 2120.016
2140.158
2180.003
2200.823
20REN169O18 1640.171
1680.406
1700.419
1720.003
21REN247M23 2680.842
2700.023
2720.003
2740.132
22REN54P11 2220.003
2260.026
2320.668
2340.303
23REN64E19 1470.061
1510.003
1530.052
1550.884
24VGL0760 130.019
140.006
150.110
160.003
20.20.003
21.20.655
22.20.194
23.20.010
25VGL0910 150.010
16.10.003
17.10.516
18.10.058
19.10.026
20.10.010
21.10.377
26VGL1063 80.448
100.048
140.019
180.023
190.323
200.139
27VGL1165 160.019
170.323
180.003
200.506
260.013
270.042
280.094
28VGL1828 180.035
190.965
29VGL2009 90.303
110.555
130.142
30VGL2409 150.010
170.184
180.706
18.10.006
190.094
31VGL2918 120.003
130.161
140.152
150.003
17.30.677
18.30.003
32VGL3008 140.084
150.577
160.035
180.190
190.110
200.003
33VGL3235 140.955
160.045

Standard genetic assessment based on 33 autosomal STR loci

Berger Picard

  NNaNeHoHeF
Mean1554.0611.9930.4380.4390.005
 SE 0.2900.1090.0350.0340.010

Standard genetic assessment based on 7 STRs in the DLA region

Berger Picard

  NNaNeHoHeF
Mean1551.2861.0630.0350.0510.091
 SE 0.1710.0370.0210.0310.054

Standard genetic assessment for individual STR loci

Berger Picard

#LocusNNaNeHoHeF
1AHT12115552.7610.6520.638-0.022
2AHT13715541.7100.4190.415-0.010
3AHTH13015562.9960.7030.666-0.056
4AHTh171-A15511.0000.0000.0000.000
5AHTh26015532.2280.4900.5510.111
6AHTk21115532.3230.5350.5690.060
7AHTk25315541.7290.4000.4220.052
8C22.27915531.7840.4650.440-0.057
9FH200115551.6240.3870.384-0.007
10FH205415562.7130.6520.631-0.032
11FH284815532.4250.5680.5880.034
12INRA2115532.9170.6770.657-0.031
13INU00515532.6230.6520.619-0.053
14INU03015531.2310.2060.187-0.101
15INU05515531.0670.0650.063-0.026
16LEI00415521.9900.4520.4970.092
17REN105L0315521.3220.2450.244-0.006
18REN162C0415531.5120.3160.3390.067
19REN169D0115541.4250.2900.2980.026
20REN169O1815542.7010.5870.6300.068
21REN247M2315541.3760.2650.2730.032
22REN54P1115541.8570.4450.4610.035
23REN64E1915541.2700.2260.212-0.063
24VGL076015582.0880.4580.5210.121
25VGL091015572.4210.6260.587-0.066
26VGL106315563.0530.7100.672-0.055
27VGL116515572.6910.6130.6280.025
28VGL182815521.0730.0580.0680.152
29VGL200915532.3810.5740.5800.010
30VGL240915551.8460.4520.4580.014
31VGL291815561.9690.5160.492-0.049
32VGL300815562.5640.6450.610-0.058
33VGL323515521.0940.0900.086-0.047

Standard genetic assessment for 7 STRs in the DLA region

Berger Picard

#LocusNNaNeHoHeF
1DLA I-3CCA15511.0000.0000.0000.000
2DLA I-4ACA15511.0000.0000.0000.000
3DLA I-4BCT15511.0000.0000.0000.000
4DLA113115521.2200.1230.1800.319
55ACA15511.0000.0000.0000.000
65ACT15511.0000.0000.0000.000
75BCA15521.2200.1230.1800.319