Statistics and Breed-wide Allele Frequency - Bernese Mountain Dog

Updated Aug 3, 2026

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Bernese Mountain Dog (n=210)
1006	387 375 293 180	0.071
1016	382 371 277 178	0.043
1030	380 373 293 178	0.019
1068	380 373 287 181	0.071
1094	395 375 277 176	0.112
1121	380 371 277 183	0.098
1160	386 369 289 176	0.562
1221	380 365 293 180	0.017
1256	386 365 281 180	0.002
1267	386 375 277 176	0.002
1292	386 369 289 178	0.002

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Bernese Mountain Dog (n=210)
2001	343 324 284	0.019
2005	339 322 280	0.114
2007	351 327 280	0.076
2012	345 322 280	0.002
2021	339 324 268	0.043
2024	343 323 280	0.557
2053	343 324 280	0.071
2071	339 322 286	0.098
2118	347 327 280	0.017
2134	343 323 268	0.002

Allele Frequencies

#	Locus Name	Allele	Bernese Mountain Dog (n=213)
1	AHT121	80	0.002
		96	0.049
		98	0.575
		100	0.101
		102	0.232
		104	0.016
		106	0.002
		108	0.021
2	AHT137	131	0.413
		137	0.291
		141	0.026
		147	0.059
		149	0.181
		153	0.031
3	AHTH130	121	0.014
		123	0.481
		127	0.061
		129	0.171
		135	0.005
		139	0.265
		143	0.002
4	AHTh171-A	219	0.512
		225	0.141
		235	0.347
5	AHTh260	240	0.031
		244	0.249
		246	0.221
		250	0.087
		252	0.275
		254	0.122
		256	0.016
6	AHTk211	87	0.822
		91	0.045
		93	0.077
		97	0.054
		99	0.002
7	AHTk253	286	0.150
		288	0.404
		290	0.148
		292	0.298
8	C22.279	116	0.124
		118	0.270
		120	0.002
		124	0.603
9	FH2001	132	0.554
		136	0.096
		140	0.099
		144	0.016
		148	0.023
		152	0.211
10	FH2054	148	0.005
		152	0.155
		156	0.587
		160	0.031
		164	0.113
		168	0.110
11	FH2848	234	0.350
		238	0.075
		242	0.362
		244	0.214
12	INRA21	95	0.739
		101	0.077
		103	0.183
13	INU005	124	0.038
		126	0.315
		128	0.502
		130	0.143
		132	0.002
14	INU030	144	0.502
		146	0.085
		150	0.392
		152	0.021
15	INU055	210	0.808
		212	0.068
		214	0.005
		218	0.120
16	LEI004	85	0.035
		95	0.796
		107	0.134
		109	0.005
		111	0.031
17	REN105L03	229	0.150
		231	0.319
		233	0.007
		237	0.218
		241	0.305
18	REN162C04	202	0.204
		204	0.171
		206	0.516
		208	0.108
19	REN169D01	202	0.002
		212	0.014
		216	0.068
		218	0.101
		220	0.805
		222	0.009
20	REN169O18	160	0.012
		162	0.401
		164	0.049
		166	0.002
		168	0.479
		170	0.056
21	REN247M23	268	0.040
		270	0.746
		272	0.061
		274	0.080
		276	0.012
		278	0.061
22	REN54P11	222	0.587
		226	0.068
		228	0.089
		232	0.056
		234	0.012
		236	0.014
		238	0.174
23	REN64E19	139	0.012
		145	0.702
		147	0.087
		153	0.200
24	VGL0760	12	0.002
		13	0.217
		14	0.606
		15	0.002
		19.2	0.002
		20.2	0.026
		21.2	0.009
		22.2	0.101
		23.2	0.014
		24.2	0.019
25	VGL0910	12	0.639
		13	0.005
		17.1	0.007
		18.1	0.019
		19.1	0.057
		20.1	0.009
		21.1	0.113
		22.1	0.137
		23.1	0.014
26	VGL1063	8	0.148
		12	0.157
		13	0.035
		14	0.282
		15	0.023
		16	0.031
		17	0.005
		18	0.023
		19	0.270
		20	0.019
		21	0.002
		22	0.005
27	VGL1165	15	0.026
		16	0.002
		17	0.002
		18	0.116
		20	0.005
		21	0.630
		26	0.120
		27	0.005
		28	0.066
		30	0.026
		31	0.002
28	VGL1828	14	0.179
		15	0.118
		16	0.196
		17	0.033
		19	0.024
		20	0.448
		21	0.002
29	VGL2009	10	0.035
		13	0.077
		14	0.162
		15	0.718
		16	0.007
30	VGL2409	13	0.573
		14	0.002
		16	0.005
		17	0.101
		18	0.305
		19	0.014
31	VGL2918	12	0.017
		13	0.708
		14	0.215
		15	0.021
		16	0.007
		17.3	0.005
		19.3	0.028
32	VGL3008	13	0.014
		15	0.444
		16	0.028
		17	0.023
		18	0.418
		19	0.038
		20	0.035
33	VGL3235	13	0.132
		14	0.278
		15	0.014
		16	0.302
		17	0.144
		18	0.052
		19	0.073
		20	0.005

Standard genetic assessment based on 33 autosomal STR loci

Bernese Mountain Dog

		N	Na	Ne	Ho	He	F
	Mean	213	6.091	2.636	0.578	0.578	0.004
	SE		0.372	0.158	0.025	0.023	0.009

Standard genetic assessment based on 7 STRs in the DLA region

Bernese Mountain Dog

		N	Na	Ne	Ho	He	F
	Mean	213	4.714	2.251	0.574	0.535	-0.070
	SE		0.171	0.158	0.047	0.042	0.005

Standard genetic assessment for individual STR loci

Bernese Mountain Dog

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	213	8	2.512	0.587	0.602	0.025
2	AHT137	213	6	3.411	0.657	0.707	0.070
3	AHTH130	213	7	2.983	0.624	0.665	0.061
4	AHTh171-A	213	3	2.485	0.615	0.598	-0.029
5	AHTh260	213	7	4.769	0.812	0.790	-0.028
6	AHTk211	213	5	1.458	0.296	0.314	0.058
7	AHTk253	213	4	3.375	0.685	0.704	0.026
8	C22.279	213	4	2.211	0.554	0.548	-0.012
9	FH2001	213	6	2.693	0.657	0.629	-0.046
10	FH2054	213	6	2.537	0.606	0.606	0.000
11	FH2848	213	4	3.286	0.723	0.696	-0.039
12	INRA21	213	3	1.706	0.399	0.414	0.035
13	INU005	213	5	2.679	0.638	0.627	-0.019
14	INU030	213	4	2.418	0.596	0.586	-0.017
15	INU055	213	4	1.490	0.329	0.329	0.001
16	LEI004	213	5	1.531	0.300	0.347	0.133
17	REN105L03	213	5	3.769	0.714	0.735	0.029
18	REN162C04	213	4	2.862	0.592	0.651	0.091
19	REN169D01	213	6	1.507	0.352	0.337	-0.046
20	REN169O18	213	6	2.524	0.629	0.604	-0.042
21	REN247M23	213	6	1.746	0.418	0.427	0.022
22	REN54P11	213	7	2.560	0.601	0.609	0.014
23	REN64E19	213	4	1.851	0.488	0.460	-0.062
24	VGL0760	213	10	2.347	0.632	0.574	-0.101
25	VGL0910	213	9	2.252	0.547	0.556	0.016
26	VGL1063	213	12	4.938	0.831	0.797	-0.042
27	VGL1165	213	11	2.325	0.571	0.570	-0.002
28	VGL1828	213	7	3.487	0.745	0.713	-0.045
29	VGL2009	213	5	1.820	0.423	0.451	0.062
30	VGL2409	213	6	2.317	0.549	0.568	0.034
31	VGL2918	213	7	1.824	0.434	0.452	0.039
32	VGL3008	213	7	2.662	0.657	0.624	-0.053
33	VGL3235	213	8	4.651	0.797	0.785	-0.015

Standard genetic assessment for 7 STRs in the DLA region

Bernese Mountain Dog

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	213	5	2.578	0.662	0.612	-0.082
2	DLA I-4ACA	213	5	2.623	0.671	0.619	-0.085
3	DLA I-4BCT	213	5	2.490	0.643	0.598	-0.075
4	DLA1131	213	5	2.055	0.549	0.513	-0.070
5	5ACA	213	5	2.024	0.531	0.506	-0.049
6	5ACT	213	4	2.586	0.662	0.613	-0.079
7	5BCA	213	4	1.400	0.300	0.286	-0.051

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Bernese Mountain Dog

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Bernese Mountain Dog

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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