Statistics and Breed-wide Allele Frequency - Bernese Mountain Dog

Updated Jun 6, 2026

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Bernese Mountain Dog (n=201)
1006	387 375 293 180	0.075
1016	382 371 277 178	0.045
1030	380 373 293 178	0.017
1068	380 373 287 181	0.072
1094	395 375 277 176	0.114
1121	380 371 277 183	0.097
1160	386 369 289 176	0.557
1221	380 365 293 180	0.015
1256	386 365 281 180	0.002
1267	386 375 277 176	0.002
1292	386 369 289 178	0.002

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Bernese Mountain Dog (n=201)
2001	343 324 284	0.017
2005	339 322 280	0.117
2007	351 327 280	0.080
2012	345 322 280	0.002
2021	339 324 268	0.045
2024	343 323 280	0.552
2053	343 324 280	0.072
2071	339 322 286	0.097
2118	347 327 280	0.015
2134	343 323 268	0.002

Allele Frequencies

#	Locus Name	Allele	Bernese Mountain Dog (n=203)
1	AHT121	80	0.002
		96	0.044
		98	0.571
		100	0.101
		102	0.239
		104	0.017
		106	0.002
		108	0.022
2	AHT137	131	0.416
		137	0.286
		141	0.025
		147	0.062
		149	0.182
		153	0.030
3	AHTH130	121	0.012
		123	0.483
		127	0.057
		129	0.171
		135	0.005
		139	0.270
		143	0.002
4	AHTh171-A	219	0.517
		225	0.145
		235	0.337
5	AHTh260	240	0.032
		244	0.251
		246	0.222
		250	0.086
		252	0.273
		254	0.118
		256	0.017
6	AHTk211	87	0.820
		91	0.044
		93	0.076
		97	0.057
		99	0.002
7	AHTk253	286	0.150
		288	0.411
		290	0.145
		292	0.293
8	C22.279	116	0.128
		118	0.268
		124	0.603
9	FH2001	132	0.552
		136	0.096
		140	0.101
		144	0.017
		148	0.025
		152	0.209
10	FH2054	148	0.005
		152	0.155
		156	0.586
		160	0.030
		164	0.113
		168	0.111
11	FH2848	234	0.342
		238	0.079
		242	0.366
		244	0.213
12	INRA21	95	0.746
		101	0.076
		103	0.177
13	INU005	124	0.034
		126	0.325
		128	0.495
		130	0.143
		132	0.002
14	INU030	144	0.500
		146	0.089
		150	0.389
		152	0.022
15	INU055	210	0.815
		212	0.067
		214	0.005
		218	0.113
16	LEI004	85	0.034
		95	0.796
		107	0.135
		109	0.005
		111	0.030
17	REN105L03	229	0.148
		231	0.318
		233	0.007
		237	0.217
		241	0.310
18	REN162C04	202	0.202
		204	0.175
		206	0.512
		208	0.111
19	REN169D01	202	0.002
		212	0.015
		216	0.064
		218	0.106
		220	0.803
		222	0.010
20	REN169O18	160	0.012
		162	0.401
		164	0.052
		166	0.002
		168	0.473
		170	0.059
21	REN247M23	268	0.035
		270	0.755
		272	0.062
		274	0.082
		276	0.010
		278	0.057
22	REN54P11	222	0.596
		226	0.064
		228	0.094
		232	0.052
		234	0.012
		236	0.015
		238	0.167
23	REN64E19	139	0.012
		145	0.707
		147	0.086
		153	0.195
24	VGL0760	12	0.002
		13	0.222
		14	0.599
		15	0.002
		19.2	0.002
		20.2	0.027
		21.2	0.010
		22.2	0.103
		23.2	0.015
		24.2	0.017
25	VGL0910	12	0.643
		13	0.005
		17.1	0.002
		18.1	0.020
		19.1	0.054
		20.1	0.007
		21.1	0.116
		22.1	0.140
		23.1	0.012
26	VGL1063	8	0.148
		12	0.155
		13	0.034
		14	0.291
		15	0.025
		16	0.032
		17	0.002
		18	0.025
		19	0.261
		20	0.020
		21	0.002
		22	0.005
27	VGL1165	15	0.027
		16	0.002
		17	0.002
		18	0.116
		20	0.005
		21	0.631
		26	0.118
		27	0.005
		28	0.064
		30	0.027
		31	0.002
28	VGL1828	14	0.177
		15	0.113
		16	0.195
		17	0.034
		19	0.025
		20	0.453
		21	0.002
29	VGL2009	10	0.032
		13	0.074
		14	0.165
		15	0.722
		16	0.007
30	VGL2409	13	0.576
		14	0.002
		16	0.005
		17	0.094
		18	0.308
		19	0.015
31	VGL2918	12	0.017
		13	0.702
		14	0.217
		15	0.022
		16	0.007
		17.3	0.005
		19.3	0.030
32	VGL3008	13	0.010
		15	0.451
		16	0.030
		17	0.025
		18	0.416
		19	0.037
		20	0.032
33	VGL3235	13	0.131
		14	0.276
		15	0.012
		16	0.308
		17	0.145
		18	0.054
		19	0.069
		20	0.005

Standard genetic assessment based on 33 autosomal STR loci

Bernese Mountain Dog

		N	Na	Ne	Ho	He	F
	Mean	203	6.061	2.630	0.577	0.577	0.003
	SE		0.378	0.158	0.025	0.023	0.009

Standard genetic assessment based on 7 STRs in the DLA region

Bernese Mountain Dog

		N	Na	Ne	Ho	He	F
	Mean	203	4.714	2.279	0.578	0.541	-0.067
	SE		0.171	0.162	0.047	0.042	0.005

Standard genetic assessment for individual STR loci

Bernese Mountain Dog

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	203	8	2.522	0.591	0.603	0.020
2	AHT137	203	6	3.408	0.670	0.707	0.052
3	AHTH130	203	7	2.955	0.619	0.662	0.065
4	AHTh171-A	203	3	2.484	0.621	0.597	-0.039
5	AHTh260	203	7	4.768	0.808	0.790	-0.022
6	AHTk211	203	5	1.463	0.296	0.316	0.065
7	AHTk253	203	4	3.347	0.680	0.701	0.031
8	C22.279	203	3	2.209	0.557	0.547	-0.017
9	FH2001	203	6	2.713	0.670	0.631	-0.061
10	FH2054	203	6	2.540	0.616	0.606	-0.016
11	FH2848	203	4	3.306	0.718	0.698	-0.029
12	INRA21	203	3	1.683	0.384	0.406	0.053
13	INU005	203	5	2.685	0.645	0.628	-0.028
14	INU030	203	4	2.440	0.601	0.590	-0.018
15	INU055	203	4	1.466	0.320	0.318	-0.007
16	LEI004	203	5	1.531	0.296	0.347	0.147
17	REN105L03	203	5	3.757	0.704	0.734	0.040
18	REN162C04	203	4	2.889	0.596	0.654	0.088
19	REN169D01	203	6	1.514	0.355	0.340	-0.044
20	REN169O18	203	6	2.557	0.631	0.609	-0.036
21	REN247M23	203	6	1.709	0.411	0.415	0.010
22	REN54P11	203	7	2.505	0.591	0.601	0.016
23	REN64E19	203	4	1.834	0.483	0.455	-0.061
24	VGL0760	203	10	2.384	0.640	0.581	-0.103
25	VGL0910	203	9	2.223	0.542	0.550	0.015
26	VGL1063	203	12	4.941	0.833	0.798	-0.044
27	VGL1165	203	11	2.322	0.562	0.569	0.014
28	VGL1828	203	7	3.456	0.739	0.711	-0.040
29	VGL2009	203	5	1.803	0.419	0.445	0.060
30	VGL2409	203	6	2.294	0.552	0.564	0.022
31	VGL2918	203	7	1.847	0.438	0.459	0.044
32	VGL3008	203	7	2.629	0.655	0.620	-0.057
33	VGL3235	203	8	4.610	0.788	0.783	-0.007

Standard genetic assessment for 7 STRs in the DLA region

Bernese Mountain Dog

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	203	5	2.630	0.670	0.620	-0.081
2	DLA I-4ACA	203	5	2.643	0.672	0.622	-0.080
3	DLA I-4BCT	203	5	2.523	0.645	0.604	-0.069
4	DLA1131	203	5	2.085	0.557	0.520	-0.070
5	5ACA	203	5	2.042	0.532	0.510	-0.043
6	5ACT	203	4	2.623	0.665	0.619	-0.075
7	5BCA	203	4	1.410	0.305	0.291	-0.051

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Bernese Mountain Dog

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Bernese Mountain Dog

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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