Statistics and Breed-wide Allele Frequency - Bernese Mountain Dog

Updated Aug 15, 2025

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Bernese Mountain Dog (n=190)
1006	387 375 293 180	0.079
1016	382 371 277 178	0.042
1030	380 373 293 178	0.013
1068	380 373 287 181	0.068
1094	395 375 277 176	0.121
1121	380 371 277 183	0.095
1160	386 369 289 176	0.561
1221	380 365 293 180	0.013
1256	386 365 281 180	0.003
1267	386 375 277 176	0.003
1292	386 369 289 178	0.003

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Bernese Mountain Dog (n=190)
2001	343 324 284	0.013
2005	339 322 280	0.124
2007	351 327 280	0.084
2012	345 322 280	0.003
2021	339 324 268	0.042
2024	343 323 280	0.555
2053	343 324 280	0.068
2071	339 322 286	0.095
2118	347 327 280	0.013
2134	343 323 268	0.003

Allele Frequencies

#	Locus Name	Allele	Bernese Mountain Dog (n=190)
1	AHT121	80	0.003
		96	0.047
		98	0.563
		100	0.100
		102	0.242
		104	0.018
		106	0.003
		108	0.024
2	AHT137	131	0.405
		137	0.284
		141	0.026
		147	0.066
		149	0.187
		153	0.032
3	AHTH130	121	0.013
		123	0.492
		127	0.061
		129	0.163
		135	0.005
		139	0.263
		143	0.003
4	AHTh171-A	219	0.516
		225	0.153
		235	0.332
5	AHTh260	240	0.034
		244	0.258
		246	0.208
		250	0.082
		252	0.287
		254	0.118
		256	0.013
6	AHTk211	87	0.821
		91	0.039
		93	0.079
		97	0.058
		99	0.003
7	AHTk253	286	0.153
		288	0.408
		290	0.139
		292	0.300
8	C22.279	116	0.132
		118	0.258
		124	0.611
9	FH2001	132	0.555
		136	0.084
		140	0.105
		144	0.016
		148	0.024
		152	0.216
10	FH2054	148	0.005
		152	0.153
		156	0.584
		160	0.024
		164	0.118
		168	0.116
11	FH2848	234	0.339
		238	0.084
		242	0.371
		244	0.205
12	INRA21	95	0.753
		101	0.066
		103	0.182
13	INU005	124	0.032
		126	0.318
		128	0.500
		130	0.147
		132	0.003
14	INU030	144	0.511
		146	0.082
		150	0.384
		152	0.024
15	INU055	210	0.811
		212	0.066
		214	0.005
		218	0.118
16	LEI004	85	0.037
		95	0.787
		107	0.139
		109	0.005
		111	0.032
17	REN105L03	229	0.134
		231	0.326
		233	0.008
		237	0.232
		241	0.300
18	REN162C04	202	0.211
		204	0.184
		206	0.487
		208	0.118
19	REN169D01	202	0.003
		212	0.016
		216	0.063
		218	0.105
		220	0.803
		222	0.011
20	REN169O18	160	0.011
		162	0.418
		164	0.053
		166	0.003
		168	0.461
		170	0.055
21	REN247M23	268	0.032
		270	0.755
		272	0.061
		274	0.082
		276	0.011
		278	0.061
22	REN54P11	222	0.603
		226	0.063
		228	0.095
		232	0.050
		234	0.011
		236	0.016
		238	0.163
23	REN64E19	139	0.011
		145	0.708
		147	0.092
		153	0.189
24	VGL0760	12	0.003
		13	0.226
		14	0.608
		19.2	0.003
		20.2	0.026
		21.2	0.011
		22.2	0.097
		23.2	0.008
		24.2	0.018
25	VGL0910	12	0.650
		13	0.005
		17.1	0.003
		18.1	0.021
		19.1	0.053
		20.1	0.008
		21.1	0.113
		22.1	0.134
		23.1	0.013
26	VGL1063	8	0.147
		12	0.161
		13	0.032
		14	0.295
		15	0.024
		16	0.034
		17	0.003
		18	0.026
		19	0.250
		20	0.021
		21	0.003
		22	0.005
27	VGL1165	15	0.029
		16	0.003
		17	0.003
		18	0.124
		20	0.005
		21	0.618
		26	0.121
		27	0.005
		28	0.061
		30	0.029
		31	0.003
28	VGL1828	14	0.171
		15	0.108
		16	0.192
		17	0.037
		19	0.026
		20	0.463
		21	0.003
29	VGL2009	10	0.029
		13	0.074
		14	0.153
		15	0.737
		16	0.008
30	VGL2409	13	0.576
		14	0.003
		16	0.005
		17	0.100
		18	0.300
		19	0.016
31	VGL2918	12	0.011
		13	0.711
		14	0.221
		15	0.018
		16	0.008
		17.3	0.003
		19.3	0.029
32	VGL3008	13	0.011
		15	0.445
		16	0.032
		17	0.024
		18	0.418
		19	0.039
		20	0.032
33	VGL3235	13	0.134
		14	0.282
		15	0.011
		16	0.303
		17	0.150
		18	0.050
		19	0.066
		20	0.005

Standard genetic assessment based on 33 autosomal STR loci

Bernese Mountain Dog

		N	Na	Ne	Ho	He	F
	Mean	190	6.030	2.626	0.575	0.576	0.006
	SE		0.370	0.157	0.025	0.024	0.010

Standard genetic assessment based on 7 STRs in the DLA region

Bernese Mountain Dog

		N	Na	Ne	Ho	He	F
	Mean	190	4.714	2.254	0.567	0.534	-0.058
	SE		0.171	0.163	0.049	0.044	0.007

Standard genetic assessment for individual STR loci

Bernese Mountain Dog

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	190	8	2.571	0.595	0.611	0.027
2	AHT137	190	6	3.497	0.679	0.714	0.049
3	AHTH130	190	7	2.925	0.605	0.658	0.080
4	AHTh171-A	190	3	2.505	0.626	0.601	-0.043
5	AHTh260	190	7	4.672	0.800	0.786	-0.018
6	AHTk211	190	5	1.459	0.289	0.315	0.080
7	AHTk253	190	4	3.343	0.668	0.701	0.046
8	C22.279	190	3	2.190	0.553	0.543	-0.017
9	FH2001	190	6	2.675	0.674	0.626	-0.076
10	FH2054	190	6	2.547	0.621	0.607	-0.023
11	FH2848	190	4	3.310	0.716	0.698	-0.026
12	INRA21	190	3	1.656	0.363	0.396	0.084
13	INU005	190	5	2.673	0.647	0.626	-0.034
14	INU030	190	4	2.407	0.605	0.585	-0.035
15	INU055	190	4	1.481	0.326	0.325	-0.005
16	LEI004	190	5	1.560	0.305	0.359	0.150
17	REN105L03	190	5	3.729	0.711	0.732	0.029
18	REN162C04	190	4	3.037	0.632	0.671	0.058
19	REN169D01	190	6	1.516	0.353	0.340	-0.036
20	REN169O18	190	6	2.544	0.626	0.607	-0.032
21	REN247M23	190	6	1.708	0.405	0.414	0.022
22	REN54P11	190	7	2.465	0.574	0.594	0.035
23	REN64E19	190	4	1.833	0.484	0.454	-0.066
24	VGL0760	190	9	2.318	0.632	0.569	-0.111
25	VGL0910	190	9	2.189	0.532	0.543	0.021
26	VGL1063	190	12	4.981	0.832	0.799	-0.040
27	VGL1165	190	11	2.393	0.574	0.582	0.015
28	VGL1828	190	7	3.397	0.737	0.706	-0.044
29	VGL2009	190	5	1.747	0.400	0.427	0.064
30	VGL2409	190	6	2.313	0.532	0.568	0.063
31	VGL2918	190	7	1.802	0.426	0.445	0.042
32	VGL3008	190	7	2.652	0.663	0.623	-0.065
33	VGL3235	190	8	4.580	0.779	0.782	0.003

Standard genetic assessment for 7 STRs in the DLA region

Bernese Mountain Dog

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	190	5	2.620	0.663	0.618	-0.072
2	DLA I-4ACA	190	5	2.605	0.663	0.616	-0.076
3	DLA I-4BCT	190	5	2.495	0.637	0.599	-0.063
4	DLA1131	190	5	2.024	0.537	0.506	-0.061
5	5ACA	190	5	2.066	0.532	0.516	-0.030
6	5ACT	190	4	2.598	0.658	0.615	-0.070
7	5BCA	190	4	1.371	0.279	0.271	-0.030

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Bernese Mountain Dog

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Bernese Mountain Dog

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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