Statistics and Breed-wide Allele Frequency - Biewer

Updated Jun 13, 2021

DLA Class I Haplotype Frequencies

DLA1 #STR typesBiewer (n=121)Biewer Yorshire Terrier (n=53)Biewer Terrier (n=186)Yorkshire Terrier (n=16)Biro Biewer (n=3)
1005389 371 277 1810.0290.0090.016----
1007380 372 281 1820.0040.009--0.03--
1008386 373 289 1820.008----0.06--
1012388 369 289 1880.1900.1510.2260.280.2
1014375 373 287 1780.0290.0090.0590.09--
1016382 371 277 1780.0250.0190.0130.03--
1019380 373 287 1850.0700.0850.0510.09--
1030380 373 293 1780.4590.3490.4950.310.5
1035386 373 277 184--0.009------
1040380 371 277 1860.1070.2080.081----
1043393 381 277 1830.0080.0090.013----
1046376 379 291 1800.033--0.027----
1068380 373 287 181--0.009------
1087380 371 277 1780.004--------
1092376 379 277 181--0.038--0.06--
1104386 373 289 1860.0120.0190.011----
1105382 379 277 1780.004------0.3
1115386 371 277 182----0.003----
1117376 373 277 180----0.003----
1118376 377 277 1800.0040.019------
1130380 373 287 1780.0080.009------
1131388 379 277 1810.0040.0470.0030.03--

DLA Class II Haplotype Frequencies

DLA2 #STR typesBiewer (n=121)Biewer Yorshire Terrier (n=53)Biewer Terrier (n=186)Yorkshire Terrier (n=16)Biro Biewer (n=3)
2003343 324 2820.2310.2080.2450.380.2
2005339 322 2800.0450.0090.027----
2013345 327 2840.0540.1420.067----
2016339 323 2840.0790.0940.0650.09--
2021339 324 2680.004--------
2023341 323 2820.4590.3490.4970.310.5
2037341 327 2800.0290.0090.0590.09--
2040345 327 2800.0700.0850.0270.03--
2044343 324 268--0.038--0.06--
2053343 324 280--0.009------
2074341 324 2840.0040.0190.003----
2080339 325 2760.0040.009--0.03--
2081343 322 2820.0120.0190.011----
2082339 325 268--0.009------
2083339 324 2820.004------0.3
2084339 323 2680.004--------

Allele Frequencies

#Locus NameAlleleBiewer (n=121)Biewer Yorshire Terrier (n=53)Biewer Terrier (n=186)Yorkshire Terrier (n=25)Biro Biewer (n=3)
1AHT121 92----0.0130.040.2
940.004--0.0130.06--
980.1030.1420.0910.20--
1000.2150.0660.1160.20--
1020.3060.3110.3410.120.7
1040.1940.3580.2280.08--
1060.021--0.0160.08--
1080.1200.0850.1260.20--
1100.0080.0280.0240.02--
1120.0290.0090.024----
122----0.003--0.2
124----0.003----
2AHT137 1310.2400.2740.2420.200.3
133------0.08--
1370.3350.2830.3090.40--
1390.1120.1230.118----
143--0.009------
147----0.0130.04--
1490.004--0.005----
1510.2560.2640.2530.20--
1530.0540.0470.0590.060.7
155------0.02--
3AHTH130 1170.012--0.013----
1190.3640.3870.3520.140.7
1210.1860.1510.0970.080.2
1230.0250.0750.0160.08--
125----0.0030.02--
1270.3220.2740.4110.240.2
1290.0830.1040.0860.40--
1310.0080.0090.0220.02--
133------0.02--
4AHTh171-A 2190.6570.7740.7150.500.3
2250.1820.0940.1260.120.5
227----0.0030.04--
2290.004--0.0030.04--
2310.1070.1130.1180.120.2
2330.0330.0190.0270.14--
2350.012--0.008----
2370.004----0.04--
5AHTh260 2380.0540.0750.0240.22--
240------0.02--
2420.0120.0190.0300.12--
2440.0950.0380.0730.020.2
2460.2560.2360.2690.360.3
2480.0870.0660.137----
2500.4960.5380.4620.260.5
254--0.0280.005----
6AHTk211 870.5000.5570.4920.210.7
890.021--0.0220.04--
910.3970.4340.3820.650.3
950.008--0.0430.06--
970.0740.0090.0620.04--
7AHTk253 2840.0330.0090.0560.020.3
2860.0540.0280.0560.02--
2880.2150.3400.2420.42--
2900.1360.2640.1340.24--
2920.5500.3580.5110.260.7
2940.012----0.04--
8C22.279 1160.1030.1130.0730.020.2
1180.0870.0380.0460.12--
1200.0040.0090.0080.04--
1220.0120.0090.0030.04--
1240.1860.1980.1990.04--
1260.3470.4150.4270.460.8
1280.2600.2170.2370.18--
130----0.0080.10--
9FH2001 124------0.12--
1320.5040.4620.5160.400.2
136--0.009--0.02--
140----0.0110.12--
1440.0790.0940.0590.080.2
1480.4010.4060.3950.240.7
1520.0170.0090.0190.02--
156--0.019------
10FH2054 1480.2150.2550.1940.34--
1520.1320.0570.1480.260.5
1560.3310.4530.3600.320.5
1600.2070.1320.196----
1640.0700.0470.0780.02--
1680.0450.0570.0240.06--
11FH2848 2320.012--0.003----
2340.0950.0570.073----
2360.3390.3300.3470.24--
2380.1530.1320.1530.220.5
2400.3800.3960.3840.400.5
242----0.003----
2440.0210.0850.0380.14--
12INRA21 910.2110.1980.210--0.2
950.1490.1510.2120.420.3
970.3310.2640.1670.220.3
99--0.028--0.10--
1010.3020.3300.4030.260.2
1050.0080.0280.008----
13INU005 1060.0120.0570.0430.06--
1100.054--0.0350.10--
120----0.003----
1240.8260.7920.7900.561.0
1260.0580.0940.0320.08--
128----0.0130.02--
1300.012--0.0220.12--
1320.0370.0570.0620.04--
134------0.02--
14INU030 1440.2310.2550.2310.280.3
1460.0410.0280.022----
1480.0620.0850.0380.10--
1500.5370.5570.6420.420.5
1520.0540.0280.0110.080.2
1540.0740.0470.0560.10--
156------0.02--
15INU055 208------0.04--
2100.5330.5090.5890.460.3
2120.0330.0470.0350.06--
2140.1610.1320.1240.20--
2160.0370.0940.0560.02--
2180.2360.2170.1960.220.7
16LEI004 850.0790.1040.1020.18--
950.8220.8020.7580.700.8
970.0910.0940.1400.02--
101------0.02--
1050.004------0.2
1070.004----0.08--
17REN105L03 2290.012--------
2310.0250.0850.0380.08--
2330.3100.2360.3040.08--
2350.0990.1230.1420.08--
2370.3020.2360.2740.24--
2410.2520.3210.2420.501.0
247------0.02--
18REN162C04 1980.004----0.14--
2000.0290.0470.0560.06--
2020.1120.1040.0990.120.3
2040.0580.0750.0540.040.3
2060.3140.2830.2280.060.3
2080.0120.0190.0430.06--
2100.4710.4720.5190.52--
19REN169D01 2020.1980.2080.1530.160.2
210--0.0190.0130.08--
2120.3720.3680.4410.180.2
2160.2440.2830.2690.420.7
2200.1860.1230.1240.16--
20REN169O18 158------0.04--
1600.033--0.0270.16--
1620.1570.2170.1480.40--
1640.6570.4810.6750.301.0
1660.1070.1890.113----
1680.0210.0280.0300.02--
1700.0250.0850.0080.06--
172------0.02--
21REN247M23 2680.2440.2260.2020.24--
2700.0250.0570.0400.22--
2720.4420.4340.4250.320.2
276--------0.3
2780.2890.2830.3330.220.5
22REN54P11 2220.0170.1040.0240.04--
2240.008--0.005----
2260.1360.2170.2260.060.2
230------0.02--
2320.2520.1790.1610.340.2
2340.1030.0380.0910.020.3
2360.2930.3400.3280.500.3
2380.1900.1230.1640.02--
23REN64E19 1390.1650.2450.1450.220.7
1430.012--0.005----
1450.3880.2740.4570.06--
1470.3930.4530.3280.56--
1490.0210.0190.0320.040.3
1510.008--0.0080.02--
1530.008--0.0240.08--
1550.0040.009--0.02--
24VGL0760 120.2360.4430.2930.140.3
130.0080.0380.008----
140.0450.0280.043----
20.20.0330.0190.0320.040.3
21.20.3220.2450.2960.36--
22.20.0370.0280.0730.14--
23.20.1360.0750.1320.24--
24.20.1780.1230.1210.080.3
25.20.004--0.003----
25VGL0910 15.1------0.02--
16.10.0660.0280.1210.16--
17.10.004--0.0050.08--
18.10.0120.0090.0320.04--
190.0950.0660.032----
19.10.2190.3020.2630.100.3
200.0290.057--0.06--
20.10.0120.0090.0190.160.2
210.004--------
21.10.1780.1320.1880.080.3
220.0210.0190.051----
22.10.3510.3580.2770.100.2
23----0.003----
23.10.004--0.0080.14--
24.10.0040.019--0.06--
26VGL1063 8----0.0030.02--
9------0.02--
11------0.02--
120.025--0.022----
130.025--0.0190.04--
140.2310.1510.2660.360.2
150.4090.4530.4010.320.8
160.1200.1600.1260.02--
170.0500.0660.0460.10--
180.0910.1420.0730.10--
190.0080.0090.003----
200.0410.0190.038----
21----0.005----
27VGL1165 15------0.02--
18------0.02--
190.4710.4530.5750.320.8
200.2730.1600.1020.14--
210.0450.0660.0650.060.2
220.004--------
250.0040.019--0.08--
260.0210.0750.0270.06--
280.0990.0750.0910.26--
290.0790.1420.1260.04--
300.0040.0090.011----
31----0.003----
28VGL1828 140.0700.1130.078----
150.0500.0850.032--0.2
160.2190.2360.1670.280.3
170.1360.1510.1340.120.3
18--0.0090.0190.040.2
190.3930.2550.3580.26--
200.0540.0190.0240.02--
210.045--0.0480.14--
220.0330.1320.1400.10--
23------0.04--
29VGL2009 100.012--0.0110.04--
110.2480.1980.2850.12--
120.033--0.0030.020.2
130.5540.6510.5300.440.3
140.0250.0380.0620.260.5
150.1160.1130.0940.12--
160.012--0.016----
30VGL2409 130.0170.0190.0050.020.2
140.008--0.0160.02--
150.008--0.0080.06--
160.0740.0850.1590.08--
170.2110.3110.2200.400.2
180.3140.2260.3200.380.7
190.012--0.0160.02--
200.3550.3580.2470.02--
21----0.008----
31VGL2918 120.0870.1790.1210.140.2
130.0870.0090.1320.140.2
140.0660.1040.0860.12--
150.017--0.0270.10--
160.0040.0090.019----
17.30.5660.4620.4920.280.7
18------0.02--
18.30.0990.1130.0380.14--
19.30.0740.1040.0780.06--
20.3--0.019------
22.3----0.008----
32VGL3008 130.0620.0470.032----
150.0950.0940.1480.140.3
160.0290.0940.0620.02--
170.1450.2080.0620.080.2
180.4130.2830.3600.320.2
190.0830.0280.1100.16--
200.1740.2450.2150.240.3
21----0.003----
22----0.0080.04--
33VGL3235 120.0040.0090.0160.04--
130.1120.0660.1160.04--
140.2150.2830.1750.380.2
150.1240.0940.0910.06--
160.0500.0380.0460.12--
170.2730.1420.2340.100.3
180.1530.1790.1750.160.5
190.0040.0090.0190.04--
200.0080.0090.0130.02--
210.0580.1700.1160.04--

Standard genetic assessment based on 33 autosomal STR loci

Biewer

  NNaNeHoHeF
Mean3888.3033.5300.6720.6860.020
 SE 0.4080.1860.0200.0190.005

Biewer Yorshire Terrier

  NNaNeHoHeF
Mean535.9703.3950.6900.673-0.027
 SE 0.2950.1720.0230.0210.014

Biewer Terrier

  NNaNeHoHeF
Mean1867.1523.4230.6590.6730.021
 SE 0.3660.1930.0210.0200.009

Yorkshire Terrier

  NNaNeHoHeF
Mean256.8483.8950.6950.7200.034
 SE 0.2910.2270.0180.0140.019

Biro Biewer

  NNaNeHoHeF
Mean32.6362.2110.5860.483-0.190
 SE 0.1470.1360.0570.0350.076

Standard genetic assessment based on 7 STRs in the DLA region

Biewer

  NNaNeHoHeF
Mean3886.7142.6190.6150.605-0.016
 SE 0.8010.1700.0290.0280.005

Biewer Yorshire Terrier

  NNaNeHoHeF
Mean536.1433.0920.6930.660-0.054
 SE 0.6520.2450.0250.0300.027

Biewer Terrier

  NNaNeHoHeF
Mean1865.2862.3960.5870.570-0.025
 SE 0.6910.1450.0350.0290.013

Yorkshire Terrier

  NNaNeHoHeF
Mean255.5712.8370.5200.6300.183
 SE 0.4450.2180.0540.0320.066

Biro Biewer

  NNaNeHoHeF
Mean32.4292.0960.7620.460-0.535
 SE 0.2750.2310.1460.0830.116

Standard genetic assessment for individual STR loci

Biewer

#LocusNNaNeHoHeF
1AHT121388125.0460.8170.802-0.019
2AHT137388104.2050.7810.762-0.025
3AHTH13038893.6260.7270.724-0.004
4AHTh171-A38881.9680.4850.4920.015
5AHTh26038883.2090.6750.6880.019
6AHTk21138852.4430.5920.591-0.002
7AHTk25338863.0080.6570.6680.016
8C22.27938883.7710.7190.7350.021
9FH200138882.4810.5720.5970.042
10FH205438864.2590.7680.765-0.004
11FH284838873.4250.7270.708-0.027
12INRA2138863.9070.7190.7440.034
13INU00538891.5850.3510.3690.051
14INU03038872.4690.5980.595-0.005
15INU05538862.6770.6060.6260.033
16LEI00438861.5830.3660.3680.006
17REN105L0338874.0520.7420.7530.014
18REN162C0438873.0720.6370.6740.056
19REN169D0138853.5680.7240.720-0.006
20REN169O1838882.3150.5540.5680.025
21REN247M2338853.0950.6960.677-0.028
22REN54P1138884.5990.7290.7830.068
23REN64E1938883.1280.6110.6800.102
24VGL076038894.6780.7220.7860.082
25VGL0910388155.1720.8140.807-0.010
26VGL1063388133.9360.7190.7460.036
27VGL1165388123.1690.6680.6840.025
28VGL1828388105.0010.7940.8000.008
29VGL200938872.6610.5950.6240.046
30VGL240938894.0390.7400.7520.017
31VGL2918388113.4150.6680.7070.056
32VGL300838894.6410.7890.785-0.005
33VGL3235388106.2820.8120.8410.034

Biewer Yorshire Terrier

#LocusNNaNeHoHeF
1AHT1215373.8770.7920.742-0.068
2AHT1375364.1310.7550.7580.004
3AHTH1305363.7910.7550.736-0.025
4AHTh171-A5341.6120.3770.3790.006
5AHTh2605372.7980.6040.6430.060
6AHTk2115332.0070.4910.5020.022
7AHTk2535353.1790.6420.6850.064
8C22.2795373.6620.6980.7270.040
9FH20015362.5790.5850.6120.045
10FH20545363.3780.6600.7040.062
11FH28485353.4030.7740.706-0.096
12INRA215364.1250.7170.7580.054
13INU0055341.5550.3960.357-0.111
14INU0305362.5930.6040.6140.017
15INU0555352.9840.6420.6650.035
16LEI0045331.5090.3580.337-0.063
17REN105L035354.2300.6600.7640.135
18REN162C045363.1090.7550.678-0.113
19REN169D015353.6500.8490.726-0.169
20REN169O185353.1040.6980.678-0.030
21REN247M235343.0970.8110.677-0.198
22REN54P115364.5090.7360.7780.054
23REN64E195352.9370.7740.659-0.173
24VGL07605383.5600.7920.719-0.102
25VGL091053104.0590.7740.754-0.026
26VGL10635373.5920.7550.722-0.046
27VGL11655383.7450.7170.7330.022
28VGL18285385.5190.8110.8190.009
29VGL20095342.0950.5850.523-0.119
30VGL24095353.5180.6790.7160.051
31VGL29185383.5620.8300.719-0.154
32VGL30085374.8980.8300.796-0.043
33VGL323553105.6800.8490.824-0.030

Biewer Terrier

#LocusNNaNeHoHeF
1AHT121186124.8020.8060.792-0.019
2AHT13718674.2440.8010.764-0.048
3AHTH13018683.2170.6940.689-0.006
4AHTh171-A18671.8450.4620.458-0.010
5AHTh26018673.2090.6830.6880.008
6AHTk21118652.5390.6240.606-0.029
7AHTk25318652.9080.6670.656-0.016
8C22.27918683.5000.6940.7140.029
9FH200118652.3450.5270.5730.081
10FH205418664.2690.7630.7660.003
11FH284818673.3530.7040.702-0.004
12INRA2118653.5780.7100.7210.015
13INU00518681.5790.3440.3670.062
14INU03018662.1210.5110.5290.034
15INU05518652.4700.6080.595-0.021
16LEI00418631.6540.3870.3950.021
17REN105L0318654.0370.7530.752-0.001
18REN162C0418662.9480.5810.6610.121
19REN169D0118653.2730.6770.6940.024
20REN169O1818662.0340.5110.508-0.004
21REN247M2318642.9960.6510.6660.024
22REN54P1118674.5370.7370.7800.055
23REN64E1918672.9480.5650.6610.146
24VGL076018694.6840.6940.7860.118
25VGL0910186114.9690.8120.799-0.016
26VGL1063186113.8930.7530.743-0.013
27VGL116518682.6980.6340.629-0.008
28VGL182818694.9110.7960.7960.001
29VGL200918672.6690.6020.6250.037
30VGL240918694.2030.8060.762-0.058
31VGL291818693.4480.6290.7100.114
32VGL300818694.5710.7310.7810.064
33VGL3235186106.5050.8490.846-0.004

Yorkshire Terrier

#LocusNNaNeHoHeF
1AHT1212596.5450.8800.847-0.039
2AHT1372573.9680.8000.748-0.070
3AHTH1302583.9810.6800.7490.092
4AHTh171-A2573.2980.8000.697-0.148
5AHTh2602563.8340.6800.7390.080
6AHTk2112552.1370.5420.532-0.018
7AHTk2532563.2890.8000.696-0.149
8C22.2792583.6550.6800.7260.064
9FH20012573.9430.6400.7460.143
10FH20542553.4530.7600.710-0.070
11FH28482543.5010.6000.7140.160
12INRA212543.3070.7200.698-0.032
13INU0052582.8540.6400.6500.015
14INU0302563.5510.6400.7180.109
15INU0552563.2720.7600.694-0.094
16LEI0042551.8880.3600.4700.235
17REN105L032563.0560.7200.673-0.070
18REN162C042573.1570.7200.683-0.054
19REN169D012553.7540.6800.7340.073
20REN169O182573.5510.7600.718-0.058
21REN247M232543.8940.7200.7430.031
22REN54P112572.6880.4800.6280.236
23REN64E192572.6710.7200.626-0.151
24VGL07602564.2660.6400.7660.164
25VGL091025118.8650.7600.8870.143
26VGL10632593.9180.7600.745-0.020
27VGL11652594.8640.6800.7940.144
28VGL18282585.1650.8000.8060.008
29VGL20092563.4250.6000.7080.153
30VGL24092583.1650.6000.6840.123
31VGL29182586.0390.7200.8340.137
32VGL30082574.6820.8400.786-0.068
33VGL323525104.8830.7600.7950.044

Biro Biewer

#LocusNNaNeHoHeF
1AHT121332.0000.6670.500-0.333
2AHT137321.8000.6670.444-0.500
3AHTH130332.0000.3330.5000.333
4AHTh171-A332.5710.3330.6110.455
5AHTh260332.5711.0000.611-0.636
6AHTk211321.8000.6670.444-0.500
7AHTk253321.8000.6670.444-0.500
8C22.279321.3850.3330.278-0.200
9FH2001332.0000.6670.500-0.333
10FH2054322.0001.0000.500-1.000
11FH2848322.0001.0000.500-1.000
12INRA21343.6001.0000.722-0.385
13INU005311.0000.0000.0000.000
14INU030332.5710.6670.611-0.091
15INU055321.8000.0000.4441.000
16LEI004321.3850.3330.278-0.200
17REN105L03311.0000.0000.0000.000
18REN162C04333.0000.6670.6670.000
19REN169D01332.0000.6670.500-0.333
20REN169O18311.0000.0000.0000.000
21REN247M23332.5711.0000.611-0.636
22REN54P11343.6000.6670.7220.077
23REN64E19321.8000.0000.4441.000
24VGL0760333.0000.6670.6670.000
25VGL0910343.6001.0000.722-0.385
26VGL1063321.3850.3330.278-0.200
27VGL1165321.3850.3330.278-0.200
28VGL1828343.6000.6670.7220.077
29VGL2009332.5710.6670.611-0.091
30VGL2409332.0000.6670.500-0.333
31VGL2918332.0000.6670.500-0.333
32VGL3008343.6001.0000.722-0.385
33VGL3235332.5711.0000.611-0.636

Standard genetic assessment for 7 STRs in the DLA region

Biewer

#LocusNNaNeHoHeF
1DLA I-3CCA38882.2500.5640.556-0.016
2DLA I-4ACA38892.4640.6190.594-0.041
3DLA I-4BCT38863.2960.7060.697-0.014
4DLA1131388102.9660.6650.663-0.003
55ACA38842.8540.6680.650-0.028
65ACT38852.6700.6290.625-0.005
75BCA38851.8310.4560.454-0.005

Biewer Yorshire Terrier

#LocusNNaNeHoHeF
1DLA I-3CCA5382.0300.5850.507-0.153
2DLA I-4ACA5373.0600.7360.673-0.093
3DLA I-4BCT5353.4240.6600.7080.067
4DLA11315394.1280.7360.7580.029
55ACA5343.5270.7920.716-0.106
65ACT5353.0470.7170.672-0.067
75BCA5352.4320.6230.589-0.057

Biewer Terrier

#LocusNNaNeHoHeF
1DLA I-3CCA18682.2240.5540.550-0.006
2DLA I-4ACA18652.2370.5810.553-0.050
3DLA I-4BCT18653.0230.7040.669-0.053
4DLA113118682.5970.6400.615-0.040
55ACA18642.5310.6080.605-0.004
65ACT18642.4890.6340.598-0.060
75BCA18631.6740.3870.4030.039

Yorkshire Terrier

#LocusNNaNeHoHeF
1DLA I-3CCA2563.4720.6000.7120.157
2DLA I-4ACA2582.7900.6000.6420.065
3DLA I-4BCT2553.3970.6000.7060.150
4DLA11312563.4060.6400.7060.094
55ACA2542.5880.6000.6140.022
65ACT2552.3630.2400.5770.584
75BCA2551.8410.3600.4570.212

Biro Biewer

#LocusNNaNeHoHeF
1DLA I-3CCA332.5711.0000.611-0.636
2DLA I-4ACA332.5711.0000.611-0.636
3DLA I-4BCT332.5711.0000.611-0.636
4DLA1131321.3850.3330.278-0.200
55ACA332.5711.0000.611-0.636
65ACT322.0001.0000.500-1.000
75BCA311.0000.0000.0000.000