Statistics and Breed-wide Allele Frequency - Biewer

Updated Aug 9, 2020

DLA Class I Haplotype Frequencies

DLA1 #STR typesBiewer (n=121)Biewer Yorshire Terrier (n=53)Biewer Terrier (n=147)Yorkshire Terrier (n=16)Biro Biewer (n=3)
1005389 371 277 1810.0290.0090.020----
1007380 372 281 1820.0040.009--0.03--
1008386 373 289 1820.008----0.06--
1012388 369 289 1880.1900.1510.2350.280.2
1014375 373 287 1780.0290.0090.0610.09--
1016382 371 277 1780.0250.0190.0170.03--
1019380 373 287 1850.0700.0850.0370.09--
1030380 373 293 1780.4590.3490.4800.310.5
1035386 373 277 184--0.009------
1040380 371 277 1860.1070.2080.078----
1043393 381 277 1830.0080.0090.017----
1046376 379 291 1800.033--0.034----
1068380 373 287 181--0.009------
1087380 371 277 1780.004--------
1092376 379 277 181--0.038--0.06--
1104386 373 289 1860.0120.0190.010----
1105382 379 277 1780.004------0.3
1115386 371 277 182----0.003----
1117376 373 277 180----0.003----
1118376 377 277 1800.0040.019------
1130380 373 287 1780.0080.009------
1131388 379 277 1810.0040.0470.0030.03--

DLA Class II Haplotype Frequencies

DLA2 #STR typesBiewer (n=121)Biewer Yorshire Terrier (n=53)Biewer Terrier (n=147)Yorkshire Terrier (n=16)Biro Biewer (n=3)
2003343 324 2820.2310.2080.2590.380.2
2005339 322 2800.0450.0090.034----
2013345 327 2840.0540.1420.065----
2016339 323 2840.0790.0940.0540.09--
2021339 324 2680.004--------
2023341 323 2820.4590.3490.4830.310.5
2037341 327 2800.0290.0090.0610.09--
2040345 327 2800.0700.0850.0310.03--
2044343 324 268--0.038--0.06--
2053343 324 280--0.009------
2074341 324 2840.0040.0190.003----
2080339 325 2760.0040.009--0.03--
2081343 322 2820.0120.0190.010----
2082339 325 268--0.009------
2083339 324 2820.004------0.3
2084339 323 2680.004--------

Allele Frequencies

#Locus NameAlleleBiewer (n=121)Biewer Yorshire Terrier (n=53)Biewer Terrier (n=147)Yorkshire Terrier (n=25)Biro Biewer (n=3)
1AHT121 92----0.0100.040.2
940.004--0.0170.06--
980.1030.1420.0880.20--
1000.2150.0660.1160.20--
1020.3060.3110.3500.120.7
1040.1940.3580.2210.08--
1060.021--0.0200.08--
1080.1200.0850.1260.20--
1100.0080.0280.0240.02--
1120.0290.0090.020----
122----0.003--0.2
124----0.003----
2AHT137 1310.2400.2740.2350.200.3
133------0.08--
1370.3350.2830.2960.40--
1390.1120.1230.116----
143--0.009------
147----0.0170.04--
1490.004--0.007----
1510.2560.2640.2760.20--
1530.0540.0470.0540.060.7
155------0.02--
3AHTH130 1170.012--0.010----
1190.3640.3870.3540.140.7
1210.1860.1510.0750.080.2
1230.0250.0750.0200.08--
125----0.0030.02--
1270.3220.2740.4460.240.2
1290.0830.1040.0710.40--
1310.0080.0090.0200.02--
133------0.02--
4AHTh171-A 2190.6570.7740.7180.500.3
2250.1820.0940.1020.120.5
227----0.0030.04--
2290.004--0.0030.04--
2310.1070.1130.1330.120.2
2330.0330.0190.0310.14--
2350.012--0.010----
2370.004----0.04--
5AHTh260 2380.0540.0750.0310.22--
240------0.02--
2420.0120.0190.0340.12--
2440.0950.0380.0650.020.2
2460.2560.2360.2820.360.3
2480.0870.0660.153----
2500.4960.5380.4290.260.5
254--0.0280.007----
6AHTk211 870.5000.5570.5310.210.7
890.021--0.0240.04--
910.3970.4340.3610.650.3
950.008--0.0410.06--
970.0740.0090.0440.04--
7AHTk253 2840.0330.0090.0610.020.3
2860.0540.0280.0650.02--
2880.2150.3400.2690.42--
2900.1360.2640.1190.24--
2920.5500.3580.4860.260.7
2940.012----0.04--
8C22.279 1160.1030.1130.0820.020.2
1180.0870.0380.0540.12--
1200.0040.0090.0100.04--
1220.0120.0090.0030.04--
1240.1860.1980.1900.04--
1260.3470.4150.4490.460.8
1280.2600.2170.2040.18--
130----0.0070.10--
9FH2001 124------0.12--
1320.5040.4620.5340.400.2
136--0.009--0.02--
140----0.0140.12--
1440.0790.0940.0680.080.2
1480.4010.4060.3610.240.7
1520.0170.0090.0240.02--
156--0.019------
10FH2054 1480.2150.2550.1940.34--
1520.1320.0570.1560.260.5
1560.3310.4530.3500.320.5
1600.2070.1320.170----
1640.0700.0470.0990.02--
1680.0450.0570.0310.06--
11FH2848 2320.012--0.003----
2340.0950.0570.065----
2360.3390.3300.3740.24--
2380.1530.1320.1500.220.5
2400.3800.3960.3640.400.5
242----0.003----
2440.0210.0850.0410.14--
12INRA21 910.2110.1980.245--0.2
950.1490.1510.1460.420.3
970.3310.2640.1700.220.3
99--0.028--0.10--
1010.3020.3300.4290.260.2
1050.0080.0280.010----
13INU005 1060.0120.0570.0540.06--
1100.054--0.0310.10--
120----0.003----
1240.8260.7920.7890.561.0
1260.0580.0940.0310.08--
128----0.0100.02--
1300.012--0.0140.12--
1320.0370.0570.0680.04--
134------0.02--
14INU030 1440.2310.2550.2280.280.3
1460.0410.0280.024----
1480.0620.0850.0270.10--
1500.5370.5570.6700.420.5
1520.0540.0280.0100.080.2
1540.0740.0470.0410.10--
156------0.02--
15INU055 208------0.04--
2100.5330.5090.6190.460.3
2120.0330.0470.0310.06--
2140.1610.1320.1160.20--
2160.0370.0940.0440.02--
2180.2360.2170.1900.220.7
16LEI004 850.0790.1040.1050.18--
950.8220.8020.7860.700.8
970.0910.0940.1090.02--
101------0.02--
1050.004------0.2
1070.004----0.08--
17REN105L03 2290.012--------
2310.0250.0850.0340.08--
2330.3100.2360.3330.08--
2350.0990.1230.1020.08--
2370.3020.2360.2620.24--
2410.2520.3210.2690.501.0
247------0.02--
18REN162C04 1980.004----0.14--
2000.0290.0470.0650.06--
2020.1120.1040.1120.120.3
2040.0580.0750.0440.040.3
2060.3140.2830.2450.060.3
2080.0120.0190.0440.06--
2100.4710.4720.4900.52--
19REN169D01 2020.1980.2080.1390.160.2
210--0.0190.0170.08--
2120.3720.3680.4490.180.2
2160.2440.2830.2480.420.7
2200.1860.1230.1460.16--
20REN169O18 158------0.04--
1600.033--0.0310.16--
1620.1570.2170.1460.40--
1640.6570.4810.6630.301.0
1660.1070.1890.112----
1680.0210.0280.0370.02--
1700.0250.0850.0100.06--
172------0.02--
21REN247M23 2680.2440.2260.1770.24--
2700.0250.0570.0410.22--
2720.4420.4340.4420.320.2
276--------0.3
2780.2890.2830.3400.220.5
22REN54P11 2220.0170.1040.0270.04--
2240.008--0.007----
2260.1360.2170.1940.060.2
230------0.02--
2320.2520.1790.1390.340.2
2340.1030.0380.0850.020.3
2360.2930.3400.3570.500.3
2380.1900.1230.1900.02--
23REN64E19 1390.1650.2450.1390.220.7
1430.012--0.007----
1450.3880.2740.4250.06--
1470.3930.4530.3500.56--
1490.0210.0190.0410.040.3
1510.008--0.0100.02--
1530.008--0.0270.08--
1550.0040.009--0.02--
24VGL0760 120.2360.4430.3330.140.3
130.0080.0380.010----
140.0450.0280.044----
20.20.0330.0190.0310.040.3
21.20.3220.2450.2450.36--
22.20.0370.0280.0650.14--
23.20.1360.0750.1290.24--
24.20.1780.1230.1390.080.3
25.20.004--0.003----
25VGL0910 15.1------0.02--
16.10.0660.0280.1290.16--
17.10.004--0.0070.08--
18.10.0120.0090.0200.04--
190.0950.0660.024----
19.10.2190.3020.2790.100.3
200.0290.057--0.06--
20.10.0120.0090.0200.160.2
210.004--------
21.10.1780.1320.1940.080.3
220.0210.0190.048----
22.10.3510.3580.2650.100.2
23----0.003----
23.10.004--0.0100.14--
24.10.0040.019--0.06--
26VGL1063 8----0.0030.02--
9------0.02--
11------0.02--
120.025--0.027----
130.025--0.0240.04--
140.2310.1510.2820.360.2
150.4090.4530.4350.320.8
160.1200.1600.0990.02--
170.0500.0660.0440.10--
180.0910.1420.0510.10--
190.0080.0090.003----
200.0410.0190.024----
21----0.007----
27VGL1165 15------0.02--
18------0.02--
190.4710.4530.5710.320.8
200.2730.1600.1020.14--
210.0450.0660.0610.060.2
220.004--------
250.0040.019--0.08--
260.0210.0750.0310.06--
280.0990.0750.0950.26--
290.0790.1420.1220.04--
300.0040.0090.014----
31----0.003----
28VGL1828 140.0700.1130.071----
150.0500.0850.041--0.2
160.2190.2360.1840.280.3
170.1360.1510.1290.120.3
18--0.0090.0200.040.2
190.3930.2550.3330.26--
200.0540.0190.0310.02--
210.045--0.0440.14--
220.0330.1320.1460.10--
23------0.04--
29VGL2009 100.012--0.0140.04--
110.2480.1980.2620.12--
120.033--0.0030.020.2
130.5540.6510.5410.440.3
140.0250.0380.0540.260.5
150.1160.1130.1120.12--
160.012--0.014----
30VGL2409 130.0170.0190.0030.020.2
140.008--0.0200.02--
150.008--0.0070.06--
160.0740.0850.1390.08--
170.2110.3110.2310.400.2
180.3140.2260.3100.380.7
190.012--0.0200.02--
200.3550.3580.2590.02--
21----0.010----
31VGL2918 120.0870.1790.1050.140.2
130.0870.0090.1090.140.2
140.0660.1040.0990.12--
150.017--0.0140.10--
160.0040.0090.024----
17.30.5660.4620.5240.280.7
18------0.02--
18.30.0990.1130.0370.14--
19.30.0740.1040.0880.06--
20.3--0.019------
32VGL3008 130.0620.0470.031----
150.0950.0940.1290.140.3
160.0290.0940.0680.02--
170.1450.2080.0710.080.2
180.4130.2830.3200.320.2
190.0830.0280.1360.16--
200.1740.2450.2310.240.3
21----0.003----
22----0.0100.04--
33VGL3235 120.0040.0090.0140.04--
130.1120.0660.1290.04--
140.2150.2830.1500.380.2
150.1240.0940.0920.06--
160.0500.0380.0540.12--
170.2730.1420.2310.100.3
180.1530.1790.1600.160.5
190.0040.0090.0240.04--
200.0080.0090.0100.02--
210.0580.1700.1360.04--

Standard genetic assessment based on 33 autosomal STR loci

  NNaNeHoHeF
BiewerMean1216.8483.3950.6800.674-0.010
 SE 0.3270.1720.0220.0210.011
  NNaNeHoHeF
Biewer Yorshire TerrierMean535.9703.3950.6900.673-0.027
 SE 0.2950.1720.0230.0210.014
  NNaNeHoHeF
Biewer TerrierMean1477.1213.4050.6570.6690.021
 SE 0.3630.2000.0230.0210.009
  NNaNeHoHeF
Yorkshire TerrierMean256.8483.8950.6950.7200.034
 SE 0.2910.2270.0180.0140.019
  NNaNeHoHeF
Biro BiewerMean32.6362.2110.5860.483-0.190
 SE 0.1470.1360.0570.0350.076

Standard genetic assessment based on 7 STRs in the DLA region

  NNaNeHoHeF
BiewerMean1216.1432.6160.6410.604-0.064
 SE 0.5510.1790.0290.0290.011
  NNaNeHoHeF
Biewer Yorshire TerrierMean536.1433.0920.6930.660-0.054
 SE 0.6520.2450.0250.0300.027
  NNaNeHoHeF
Biewer TerrierMean1475.2862.4830.6000.585-0.020
 SE 0.6910.1510.0390.0300.020
  NNaNeHoHeF
Yorkshire TerrierMean255.5712.8370.5200.6300.183
 SE 0.4450.2180.0540.0320.066
  NNaNeHoHeF
Biro BiewerMean32.4292.0960.7620.460-0.535
 SE 0.2750.2310.1460.0830.116

Standard genetic assessment for individual STR loci

#LocusNNaNeHoHeF
1AHT12112194.9070.8350.796-0.048
2AHT13712163.9930.7600.750-0.014
3AHTH13012173.5920.7850.722-0.088
4AHTh171-A12172.0940.5040.5220.035
5AHTh26012163.0200.6860.669-0.026
6AHTk21112152.4190.5950.587-0.014
7AHTk25312162.6960.6200.6290.015
8C22.27912174.1460.7850.759-0.035
9FH200112142.3740.6200.579-0.071
10FH205412164.4920.8180.777-0.052
11FH284812163.4210.7600.708-0.074
12INRA2112153.7470.7270.7330.008
13INU00512161.4470.2890.3090.064
14INU03012162.8080.7190.644-0.117
15INU05512152.7170.5700.6320.098
16LEI00412151.4480.3390.309-0.095
17REN105L0312163.8290.7850.739-0.063
18REN162C0412172.9640.6530.6630.015
19REN169D0112143.6810.7520.728-0.033
20REN169O1812162.1280.5290.5300.002
21REN247M2312142.9480.7020.661-0.063
22REN54P1112174.6440.7690.7850.020
23REN64E1912183.0030.6030.6670.095
24VGL076012194.6690.7520.7860.043
25VGL0910121134.5880.8430.782-0.078
26VGL106312194.0160.6530.7510.131
27VGL116512193.1760.7020.685-0.025
28VGL182812184.2720.7850.766-0.025
29VGL200912172.6080.5870.6170.048
30VGL240912183.6310.6940.7250.042
31VGL291812182.8120.6450.644-0.000
32VGL300812174.1270.8430.758-0.113
33VGL3235121105.6290.7440.8220.096

Standard genetic assessment for 7 STRs in the DLA region

#LocusNNaNeHoHeF
1DLA I-3CCA12182.1350.5540.532-0.042
2DLA I-4ACA12172.4420.6200.590-0.050
3DLA I-4BCT12163.3110.7440.698-0.066
4DLA113112182.9600.6860.662-0.036
55ACA12142.9730.7110.664-0.071
65ACT12152.6370.6530.621-0.052
75BCA12151.8560.5210.461-0.129