Statistics and Breed-wide Allele Frequency - Borzoi

Updated Aug 9, 2020

DLA Class I Haplotype Frequencies

DLA1 #STR typesBorzoi (n=128)
1006387 375 293 1800.145
1033382 379 277 1810.047
1058387 378 287 1860.008
1059390 371 291 1820.016
1094395 375 277 1760.012
1111387 378 287 1820.012
1159395 379 277 1810.043
1160386 369 289 1760.590
1206381 379 277 1800.012
1215376 365 281 1820.043
1216376 379 277 1820.039
1217386 369 277 1840.008
1219390 371 291 1780.016
1233382 379 277 1800.004
1241380 379 277 1840.008

DLA Class II Haplotype Frequencies

DLA2 #STR typesBorzoi (n=128)
2006339 325 2800.090
2007351 327 2800.148
2017343 322 2800.008
2022339 327 2820.598
2024343 323 2800.012
2029337 324 2680.055
2047339 331 2800.012
2066339 324 2800.008
2072339 325 2820.016
2098343 323 2820.016
2116337 324 2820.039

Allele Frequencies

#Locus NameAlleleBorzoi (n=128)
1AHT121 940.133
980.094
1000.242
1040.070
1060.367
1080.086
1100.004
1120.004
2AHT137 1310.688
1350.039
1430.074
1470.004
1490.195
3AHTH130 1190.008
1210.078
1250.230
1270.395
1290.109
1310.004
1330.176
4AHTh171-A 2170.539
2190.289
2210.031
2230.027
2290.039
2310.020
2330.055
5AHTh260 2420.207
2440.078
2460.012
2480.609
2520.094
6AHTk211 870.039
890.746
910.176
950.039
7AHTk253 2820.035
2860.273
2880.141
2900.121
2920.086
2940.332
2960.012
8C22.279 1140.059
1160.422
1180.148
1200.027
1240.012
1260.332
9FH2001 1320.090
1360.176
1400.117
1440.066
1480.379
1520.152
1560.020
10FH2054 1480.094
1520.063
1560.355
1600.012
1640.129
1680.242
1720.059
1760.043
1800.004
11FH2848 2340.031
2360.488
2380.395
2440.086
12INRA21 950.480
970.250
990.043
1010.191
1030.035
13INU005 1100.043
1240.531
1260.406
1300.020
14INU030 1440.184
1480.016
1500.688
1540.113
15INU055 2100.867
2140.117
2200.016
16LEI004 850.242
950.219
970.063
1070.266
1110.176
1130.023
1170.012
17REN105L03 2290.266
2310.078
2330.234
2350.422
18REN162C04 1920.102
1940.004
2020.570
2040.277
2060.004
2080.043
19REN169D01 2020.156
2080.016
2100.023
2120.098
2160.145
2180.059
2200.379
2220.125
20REN169O18 1620.363
1640.316
1660.035
1680.051
1700.234
21REN247M23 2660.348
2680.363
2700.086
2720.035
2740.039
2780.129
22REN54P11 2260.008
2300.188
2320.094
2340.262
2360.262
2380.188
23REN64E19 1390.250
1410.141
1450.426
1470.184
24VGL0760 120.016
140.125
150.008
160.059
18.20.004
190.004
19.20.195
20.20.223
21.20.203
22.20.125
23.20.020
24.20.020
25VGL0910 130.035
16.10.020
17.10.129
18.10.016
19.10.117
20.10.227
21.10.121
22.10.320
23.10.016
26VGL1063 80.180
100.129
120.051
140.305
150.012
170.012
180.289
190.016
200.008
27VGL1165 140.082
200.012
210.004
230.016
240.027
250.078
260.047
270.453
280.270
290.012
28VGL1828 150.039
160.340
170.027
180.008
190.004
200.570
220.012
29VGL2009 100.004
110.023
130.543
140.406
150.023
30VGL2409 130.031
150.121
160.191
170.297
180.313
190.008
200.035
210.004
31VGL2918 120.094
130.520
140.113
150.012
17.30.004
18.30.242
19.30.016
32VGL3008 150.086
160.156
170.137
180.266
190.184
200.137
210.035
33VGL3235 130.598
140.012
150.227
160.047
170.027
180.020
190.008
200.063

Standard genetic assessment based on 33 autosomal STR loci

  NNaNeHoHeF
BorzoiMean1286.4553.4130.6270.6640.055
 SE 0.3510.2070.0220.0230.009

Standard genetic assessment based on 7 STRs in the DLA region

  NNaNeHoHeF
BorzoiMean1285.7142.1910.5270.5320.009
 SE 0.5960.1260.0270.0280.007

Standard genetic assessment for individual STR loci

#LocusNNaNeHoHeF
1AHT12112884.3050.7810.768-0.018
2AHT13712851.9310.4450.4820.076
3AHTH13012873.8790.6950.7420.063
4AHTh171-A12872.6260.5550.6190.104
5AHTh26012852.3300.5230.5710.083
6AHTk21112841.6930.4220.409-0.030
7AHTk25312874.3820.7270.7720.059
8C22.27912863.1790.5940.6850.134
9FH200112874.4590.7500.7760.033
10FH205412894.5500.7580.7800.029
11FH284812842.4850.5860.5980.019
12INRA2112853.0020.6410.6670.039
13INU00512842.2250.4690.5510.149
14INU03012841.9250.4920.481-0.024
15INU05512831.3050.2110.2340.099
16LEI00412874.7050.7110.7870.097
17REN105L0312843.2300.6170.6900.106
18REN162C0412862.4130.5000.5860.146
19REN169D0112884.5820.7340.7820.061
20REN169O1812853.4380.7340.709-0.036
21REN247M2312863.5770.6720.7200.067
22REN54P1112864.6260.7730.7840.013
23REN64E1912843.3640.7110.703-0.012
24VGL0760128126.0690.7580.8350.093
25VGL091012894.9740.7110.7990.110
26VGL106312894.3770.7270.7720.058
27VGL1165128103.3980.6480.7060.081
28VGL182812872.2560.5230.5570.060
29VGL200912852.1690.5470.539-0.015
30VGL240912884.1770.6560.7610.137
31VGL291812872.8520.6410.6490.014
32VGL300812875.7250.7970.8250.034
33VGL323512882.4040.5860.584-0.003

Standard genetic assessment for 7 STRs in the DLA region

#LocusNNaNeHoHeF
1DLA I-3CCA12882.5150.5780.6020.040
2DLA I-4ACA12862.4510.5780.5920.023
3DLA I-4BCT12862.4900.5940.5980.008
4DLA113112872.4500.6020.592-0.016
55ACA12841.8040.4530.446-0.017
65ACT12861.7270.4140.4210.016
75BCA12831.9010.4690.4740.011