Statistics and Breed-wide Allele Frequency - Borzoi

Updated Oct 21, 2021

DLA Class I Haplotype Frequencies

DLA1 #STR typesBorzoi (n=143)
1006387 375 293 1800.147
1033382 379 277 1810.042
1058387 378 287 1860.007
1059390 371 291 1820.014
1094395 375 277 1760.010
1111387 378 287 1820.010
1159395 379 277 1810.049
1160386 369 289 1760.587
1206381 379 277 1800.014
1215376 365 281 1820.052
1216376 379 277 1820.035
1217386 369 277 1840.007
1219390 371 291 1780.014
1233382 379 277 1800.003
1241380 379 277 1840.007

DLA Class II Haplotype Frequencies

DLA2 #STR typesBorzoi (n=143)
2006339 325 2800.091
2007351 327 2800.150
2017343 322 2800.007
2022339 327 2820.594
2024343 323 2800.010
2029337 324 2680.063
2047339 331 2800.014
2066339 324 2800.007
2072339 325 2820.014
2098343 323 2820.014
2116337 324 2820.035

Allele Frequencies

#Locus NameAlleleBorzoi (n=143)
1AHT121 940.126
980.094
1000.241
1020.003
1040.063
1060.378
1080.087
1100.003
1120.003
2AHT137 1310.675
1350.038
1430.084
1470.003
1490.199
3AHTH130 1190.007
1210.073
1250.231
1270.388
1290.108
1310.003
1330.189
4AHTh171-A 2170.521
2190.304
2210.038
2230.028
2290.038
2310.021
2330.049
5AHTh260 2420.210
2440.077
2460.010
2480.619
2520.084
6AHTk211 870.038
890.745
910.178
950.038
7AHTk253 2820.031
2860.269
2880.154
2900.108
2920.098
2940.329
2960.010
8C22.279 1140.052
1160.455
1180.133
1200.024
1240.014
1260.322
9FH2001 1320.087
1360.178
1400.105
1440.070
1480.381
1520.150
1560.028
10FH2054 1480.091
1520.070
1560.353
1600.014
1640.126
1680.241
1720.059
1760.042
1800.003
11FH2848 2340.028
2360.517
2380.371
2440.084
12INRA21 950.479
970.259
990.049
1010.182
1030.031
13INU005 1100.042
1240.535
1260.402
1300.021
14INU030 1440.182
1480.014
1500.703
1540.101
15INU055 2100.853
2140.126
2180.003
2200.017
16LEI004 850.238
950.238
970.070
1070.259
1110.164
1130.021
1170.010
17REN105L03 2290.273
2310.077
2330.245
2350.406
18REN162C04 1920.094
1940.003
2020.591
2040.255
2060.003
2080.052
19REN169D01 2020.161
2080.014
2100.028
2120.108
2160.143
2180.056
2200.374
2220.115
20REN169O18 1620.350
1640.311
1660.031
1680.052
1700.255
21REN247M23 2660.357
2680.350
2700.080
2720.038
2740.049
2780.126
22REN54P11 2260.007
2300.192
2320.091
2340.269
2360.255
2380.185
23REN64E19 1390.234
1410.143
1450.434
1470.189
24VGL0760 120.017
140.122
150.007
160.056
18.20.003
190.003
19.20.196
20.20.217
21.20.203
22.20.126
23.20.031
24.20.017
25VGL0910 130.031
16.10.021
17.10.133
18.10.017
19.10.112
20.10.217
21.10.115
22.10.332
23.10.021
26VGL1063 80.178
100.129
120.056
140.311
150.014
170.014
180.273
190.017
200.007
27VGL1165 140.080
200.010
210.003
230.014
240.028
250.070
260.045
270.458
280.280
290.010
28VGL1828 150.038
160.329
170.028
180.007
190.010
200.573
210.003
220.010
29VGL2009 90.003
100.003
110.028
130.563
140.381
150.021
30VGL2409 130.031
150.119
160.189
170.311
180.301
190.010
200.035
210.003
31VGL2918 120.091
130.524
140.105
150.014
17.30.003
18.30.248
19.30.014
32VGL3008 150.087
160.157
170.122
180.252
190.203
200.140
210.038
33VGL3235 130.587
140.014
150.234
160.045
170.028
180.021
190.007
200.063

Standard genetic assessment based on 33 autosomal STR loci

Borzoi

  NNaNeHoHeF
Mean1436.5763.4140.6310.6640.048
 SE 0.3480.2090.0220.0230.009

Standard genetic assessment based on 7 STRs in the DLA region

Borzoi

  NNaNeHoHeF
Mean1435.7142.2100.5460.536-0.020
 SE 0.5960.1270.0280.0280.006

Standard genetic assessment for individual STR loci

Borzoi

#LocusNNaNeHoHeF
1AHT12114394.2160.7760.763-0.018
2AHT13714351.9860.4620.4960.070
3AHTH13014373.8950.7060.7430.050
4AHTh171-A14372.6990.5800.6290.078
5AHTh26014352.2720.5310.5600.051
6AHTk21114341.6970.4340.411-0.056
7AHTk25314374.4130.7410.7730.042
8C22.27914363.0190.5660.6690.153
9FH200114374.4650.7620.7760.018
10FH205414394.5990.7830.783-0.001
11FH284814342.4210.5730.5870.023
12INRA2114353.0040.6500.6670.025
13INU00514342.2220.4690.5500.148
14INU03014341.8610.4760.463-0.028
15INU05514341.3440.2450.2560.044
16LEI00414374.7070.7200.7880.085
17REN105L0314343.2820.6150.6950.115
18REN162C0414362.3470.4900.5740.147
19REN169D0114384.6390.7480.7840.046
20REN169O1814353.4720.7130.712-0.002
21REN247M2314363.6280.6780.7240.064
22REN54P1114364.6030.7830.783-0.001
23REN64E1914343.3440.7200.701-0.028
24VGL0760143126.1700.7620.8380.090
25VGL091014394.9260.7270.7970.087
26VGL106314394.4720.7410.7760.045
27VGL1165143103.3040.6570.6970.057
28VGL182814382.2760.5310.5610.052
29VGL200914362.1580.5380.537-0.003
30VGL240914384.1780.6500.7610.145
31VGL291814372.8060.6290.6440.022
32VGL300814375.7830.7900.8270.045
33VGL323514382.4540.5870.5930.009

Standard genetic assessment for 7 STRs in the DLA region

Borzoi

#LocusNNaNeHoHeF
1DLA I-3CCA14382.5340.6010.6050.007
2DLA I-4ACA14362.4720.6010.595-0.010
3DLA I-4BCT14362.5090.6150.601-0.023
4DLA113114372.4650.6150.594-0.036
55ACA14341.8120.4690.448-0.046
65ACT14361.7320.4270.422-0.010
75BCA14331.9440.4970.486-0.022