Statistics and Breed-wide Allele Frequency - Borzoi

Updated Aug 9, 2020

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Borzoi (n=128)
1006	387 375 293 180	0.145
1033	382 379 277 181	0.047
1058	387 378 287 186	0.008
1059	390 371 291 182	0.016
1094	395 375 277 176	0.012
1111	387 378 287 182	0.012
1159	395 379 277 181	0.043
1160	386 369 289 176	0.590
1206	381 379 277 180	0.012
1215	376 365 281 182	0.043
1216	376 379 277 182	0.039
1217	386 369 277 184	0.008
1219	390 371 291 178	0.016
1233	382 379 277 180	0.004
1241	380 379 277 184	0.008

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Borzoi (n=128)
2006	339 325 280	0.090
2007	351 327 280	0.148
2017	343 322 280	0.008
2022	339 327 282	0.598
2024	343 323 280	0.012
2029	337 324 268	0.055
2047	339 331 280	0.012
2066	339 324 280	0.008
2072	339 325 282	0.016
2098	343 323 282	0.016
2116	337 324 282	0.039

Allele Frequencies

#	Locus Name	Allele	Borzoi (n=128)
1	AHT121	94	0.133
		98	0.094
		100	0.242
		104	0.070
		106	0.367
		108	0.086
		110	0.004
		112	0.004
2	AHT137	131	0.688
		135	0.039
		143	0.074
		147	0.004
		149	0.195
3	AHTH130	119	0.008
		121	0.078
		125	0.230
		127	0.395
		129	0.109
		131	0.004
		133	0.176
4	AHTh171-A	217	0.539
		219	0.289
		221	0.031
		223	0.027
		229	0.039
		231	0.020
		233	0.055
5	AHTh260	242	0.207
		244	0.078
		246	0.012
		248	0.609
		252	0.094
6	AHTk211	87	0.039
		89	0.746
		91	0.176
		95	0.039
7	AHTk253	282	0.035
		286	0.273
		288	0.141
		290	0.121
		292	0.086
		294	0.332
		296	0.012
8	C22.279	114	0.059
		116	0.422
		118	0.148
		120	0.027
		124	0.012
		126	0.332
9	FH2001	132	0.090
		136	0.176
		140	0.117
		144	0.066
		148	0.379
		152	0.152
		156	0.020
10	FH2054	148	0.094
		152	0.063
		156	0.355
		160	0.012
		164	0.129
		168	0.242
		172	0.059
		176	0.043
		180	0.004
11	FH2848	234	0.031
		236	0.488
		238	0.395
		244	0.086
12	INRA21	95	0.480
		97	0.250
		99	0.043
		101	0.191
		103	0.035
13	INU005	110	0.043
		124	0.531
		126	0.406
		130	0.020
14	INU030	144	0.184
		148	0.016
		150	0.688
		154	0.113
15	INU055	210	0.867
		214	0.117
		220	0.016
16	LEI004	85	0.242
		95	0.219
		97	0.063
		107	0.266
		111	0.176
		113	0.023
		117	0.012
17	REN105L03	229	0.266
		231	0.078
		233	0.234
		235	0.422
18	REN162C04	192	0.102
		194	0.004
		202	0.570
		204	0.277
		206	0.004
		208	0.043
19	REN169D01	202	0.156
		208	0.016
		210	0.023
		212	0.098
		216	0.145
		218	0.059
		220	0.379
		222	0.125
20	REN169O18	162	0.363
		164	0.316
		166	0.035
		168	0.051
		170	0.234
21	REN247M23	266	0.348
		268	0.363
		270	0.086
		272	0.035
		274	0.039
		278	0.129
22	REN54P11	226	0.008
		230	0.188
		232	0.094
		234	0.262
		236	0.262
		238	0.188
23	REN64E19	139	0.250
		141	0.141
		145	0.426
		147	0.184
24	VGL0760	12	0.016
		14	0.125
		15	0.008
		16	0.059
		18.2	0.004
		19	0.004
		19.2	0.195
		20.2	0.223
		21.2	0.203
		22.2	0.125
		23.2	0.020
		24.2	0.020
25	VGL0910	13	0.035
		16.1	0.020
		17.1	0.129
		18.1	0.016
		19.1	0.117
		20.1	0.227
		21.1	0.121
		22.1	0.320
		23.1	0.016
26	VGL1063	8	0.180
		10	0.129
		12	0.051
		14	0.305
		15	0.012
		17	0.012
		18	0.289
		19	0.016
		20	0.008
27	VGL1165	14	0.082
		20	0.012
		21	0.004
		23	0.016
		24	0.027
		25	0.078
		26	0.047
		27	0.453
		28	0.270
		29	0.012
28	VGL1828	15	0.039
		16	0.340
		17	0.027
		18	0.008
		19	0.004
		20	0.570
		22	0.012
29	VGL2009	10	0.004
		11	0.023
		13	0.543
		14	0.406
		15	0.023
30	VGL2409	13	0.031
		15	0.121
		16	0.191
		17	0.297
		18	0.313
		19	0.008
		20	0.035
		21	0.004
31	VGL2918	12	0.094
		13	0.520
		14	0.113
		15	0.012
		17.3	0.004
		18.3	0.242
		19.3	0.016
32	VGL3008	15	0.086
		16	0.156
		17	0.137
		18	0.266
		19	0.184
		20	0.137
		21	0.035
33	VGL3235	13	0.598
		14	0.012
		15	0.227
		16	0.047
		17	0.027
		18	0.020
		19	0.008
		20	0.063

Standard genetic assessment based on 33 autosomal STR loci

		N	Na	Ne	Ho	He	F
Borzoi	Mean	128	6.455	3.413	0.627	0.664	0.055
	SE		0.351	0.207	0.022	0.023	0.009

Standard genetic assessment based on 7 STRs in the DLA region

		N	Na	Ne	Ho	He	F
Borzoi	Mean	128	5.714	2.191	0.527	0.532	0.009
	SE		0.596	0.126	0.027	0.028	0.007

Standard genetic assessment for individual STR loci

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	128	8	4.305	0.781	0.768	-0.018
2	AHT137	128	5	1.931	0.445	0.482	0.076
3	AHTH130	128	7	3.879	0.695	0.742	0.063
4	AHTh171-A	128	7	2.626	0.555	0.619	0.104
5	AHTh260	128	5	2.330	0.523	0.571	0.083
6	AHTk211	128	4	1.693	0.422	0.409	-0.030
7	AHTk253	128	7	4.382	0.727	0.772	0.059
8	C22.279	128	6	3.179	0.594	0.685	0.134
9	FH2001	128	7	4.459	0.750	0.776	0.033
10	FH2054	128	9	4.550	0.758	0.780	0.029
11	FH2848	128	4	2.485	0.586	0.598	0.019
12	INRA21	128	5	3.002	0.641	0.667	0.039
13	INU005	128	4	2.225	0.469	0.551	0.149
14	INU030	128	4	1.925	0.492	0.481	-0.024
15	INU055	128	3	1.305	0.211	0.234	0.099
16	LEI004	128	7	4.705	0.711	0.787	0.097
17	REN105L03	128	4	3.230	0.617	0.690	0.106
18	REN162C04	128	6	2.413	0.500	0.586	0.146
19	REN169D01	128	8	4.582	0.734	0.782	0.061
20	REN169O18	128	5	3.438	0.734	0.709	-0.036
21	REN247M23	128	6	3.577	0.672	0.720	0.067
22	REN54P11	128	6	4.626	0.773	0.784	0.013
23	REN64E19	128	4	3.364	0.711	0.703	-0.012
24	VGL0760	128	12	6.069	0.758	0.835	0.093
25	VGL0910	128	9	4.974	0.711	0.799	0.110
26	VGL1063	128	9	4.377	0.727	0.772	0.058
27	VGL1165	128	10	3.398	0.648	0.706	0.081
28	VGL1828	128	7	2.256	0.523	0.557	0.060
29	VGL2009	128	5	2.169	0.547	0.539	-0.015
30	VGL2409	128	8	4.177	0.656	0.761	0.137
31	VGL2918	128	7	2.852	0.641	0.649	0.014
32	VGL3008	128	7	5.725	0.797	0.825	0.034
33	VGL3235	128	8	2.404	0.586	0.584	-0.003

Standard genetic assessment for 7 STRs in the DLA region

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	128	8	2.515	0.578	0.602	0.040
2	DLA I-4ACA	128	6	2.451	0.578	0.592	0.023
3	DLA I-4BCT	128	6	2.490	0.594	0.598	0.008
4	DLA1131	128	7	2.450	0.602	0.592	-0.016
5	5ACA	128	4	1.804	0.453	0.446	-0.017
6	5ACT	128	6	1.727	0.414	0.421	0.016
7	5BCA	128	3	1.901	0.469	0.474	0.011

Veterinary Genetics Laboratory

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Statistics and Breed-wide Allele Frequency - Borzoi

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Borzoi

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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