Statistics and Breed-wide Allele Frequency - Doberman Pinscher

Updated Aug 18, 2022

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Doberman Pinscher (n=1090)
1012	388 369 289 188	0.0009
1016	382 371 277 178	0.0211
1017	386 373 289 178	0.0794
1030	380 373 293 178	0.0959
1040	380 371 277 186	0.0096
1045	376 371 277 186	0.0005
1052	380 372 289 184	0.0009
1068	380 373 287 181	0.0005
1091	381 371 277 181	0.0023
1094	395 375 277 176	0.7431
1105	382 379 277 178	0.0005
1114	380 373 287 183	0.0009
1116	380 365 289 186	0.0009
1150	395 379 277 176	0.0271
1159	395 379 277 181	0.0041
1160	386 369 289 176	0.0014
1174	399 375 277 176	0.0041
1190	386 373 291 178	0.0005
1214	397 375 277 176	0.0009
1245	395 375 289 178	0.0009
1264	391 375 277 176	0.0046

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Doberman Pinscher (n=1090)
2003	343 324 282	0.0005
2011	345 322 284	0.0005
2022	339 327 282	0.0009
2023	341 323 282	0.0959
2024	343 323 280	0.0005
2033	339 323 282	0.0018
2039	345 327 276	0.0092
2040	345 327 280	0.0005
2047	339 331 280	0.0005
2053	343 324 280	0.0014
2060	343 323 284	0.0014
2072	339 325 282	0.0009
2087	347 324 280	0.0009
2089	343 331 276	0.7729
2090	339 322 278	0.0821
2091	343 327 288	0.0211
2092	343 331 278	0.0032
2094	339 322 276	0.0018
2112	341 331 276	0.0041

Allele Frequencies

#	Locus Name	Allele	Doberman Pinscher (n=1094)
1	AHT121	92	0.0009
		96	0.8147
		98	0.1496
		100	0.0210
		102	0.0091
		104	0.0014
		108	0.0014
		112	0.0018
2	AHT137	131	0.5078
		133	0.0014
		135	0.0009
		137	0.0759
		143	0.0005
		145	0.0014
		147	0.3423
		149	0.0471
		151	0.0082
		153	0.0146
3	AHTH130	117	0.0005
		119	0.7011
		121	0.0224
		123	0.2349
		125	0.0009
		127	0.0014
		129	0.0352
		131	0.0005
		133	0.0032
4	AHTh171-A	219	0.6194
		223	0.0009
		225	0.0247
		227	0.1674
		229	0.1221
		233	0.0595
		241	0.0059
5	AHTh260	238	0.8614
		240	0.0009
		242	0.0018
		244	0.0274
		246	0.0938
		248	0.0110
		252	0.0027
		254	0.0009
6	AHTk211	87	0.0027
		89	0.1102
		91	0.8797
		93	0.0064
		95	0.0005
		97	0.0005
7	AHTk253	284	0.0005
		286	0.2836
		288	0.0110
		290	0.7027
		292	0.0023
8	C22.279	110	0.0005
		114	0.1990
		116	0.0014
		118	0.2502
		120	0.1327
		124	0.0101
		126	0.3957
		128	0.0101
		130	0.0005
9	FH2001	132	0.0247
		136	0.0005
		140	0.0018
		144	0.9520
		148	0.0206
		152	0.0005
10	FH2054	144	0.0124
		148	0.0027
		152	0.6995
		156	0.0306
		160	0.0014
		164	0.0018
		168	0.2461
		172	0.0055
11	FH2848	234	0.0009
		236	0.0005
		238	0.0334
		240	0.0101
		242	0.0069
		244	0.9470
		246	0.0009
		248	0.0005
12	INRA21	91	0.0005
		95	0.0659
		99	0.0366
		101	0.8591
		105	0.0380
13	INU005	110	0.0032
		122	0.4122
		124	0.3285
		126	0.2392
		132	0.0169
14	INU030	144	0.2644
		146	0.0014
		150	0.5755
		152	0.1587
15	INU055	208	0.0005
		210	0.3262
		212	0.0059
		216	0.1738
		218	0.4794
		220	0.0009
		222	0.0133
16	LEI004	85	0.6738
		95	0.0027
		97	0.1423
		103	0.0018
		107	0.1793
17	REN105L03	227	0.0059
		231	0.0018
		233	0.0009
		235	0.9452
		237	0.0251
		239	0.0027
		241	0.0178
		245	0.0005
18	REN162C04	200	0.0320
		202	0.6066
		204	0.0027
		206	0.0457
		208	0.0403
		210	0.0005
		212	0.2402
		214	0.0027
		216	0.0293
19	REN169D01	202	0.0576
		210	0.0005
		212	0.3222
		214	0.1764
		216	0.3227
		218	0.0073
		220	0.1129
		224	0.0005
20	REN169O18	158	0.0553
		160	0.0005
		162	0.5128
		164	0.0027
		166	0.0027
		168	0.2198
		170	0.1888
		172	0.0174
21	REN247M23	268	0.1220
		270	0.0009
		272	0.8743
		274	0.0027
22	REN54P11	220	0.0005
		222	0.0009
		226	0.5352
		230	0.0041
		232	0.0023
		234	0.1368
		236	0.0037
		238	0.3161
		240	0.0005
23	REN64E19	139	0.0009
		143	0.0005
		145	0.5737
		147	0.2580
		149	0.0192
		153	0.1464
		155	0.0014
24	VGL0760	12	0.3047
		13	0.3042
		14	0.0018
		18.2	0.1752
		19.2	0.0050
		20.2	0.1871
		21.2	0.0124
		22	0.0005
		22.2	0.0046
		23.2	0.0037
		24.2	0.0005
		25.2	0.0005
25	VGL0910	15	0.0037
		16	0.0352
		16.1	0.0105
		17	0.0027
		17.1	0.0032
		18.1	0.0064
		19.1	0.7027
		20.1	0.1263
		21.1	0.1002
		22.1	0.0087
		23.1	0.0005
26	VGL1063	11	0.0005
		12	0.0032
		13	0.0041
		14	0.5192
		15	0.1491
		16	0.2091
		17	0.0165
		18	0.0718
		19	0.0174
		20	0.0087
		21	0.0005
27	VGL1165	18	0.0032
		20	0.0009
		21	0.0005
		22	0.0297
		24	0.0005
		25	0.0005
		26	0.0009
		27	0.0087
		28	0.3010
		29	0.5252
		30	0.0270
		31	0.0993
		32	0.0027
28	VGL1828	15	0.0041
		16	0.5316
		17	0.3449
		18	0.0055
		19	0.0059
		20	0.0865
		21	0.0210
		22	0.0005
29	VGL2009	9	0.0229
		11	0.5133
		12	0.0032
		13	0.0256
		14	0.2415
		15	0.1898
		16	0.0037
30	VGL2409	13	0.0005
		14	0.1903
		15	0.0059
		16	0.0037
		17	0.3134
		18	0.0668
		19	0.3856
		20	0.0339
31	VGL2918	12	0.0238
		13	0.0229
		14	0.3756
		15	0.4547
		16	0.0165
		16.3	0.0009
		17	0.0032
		17.3	0.0096
		18.3	0.0050
		19.3	0.0242
		20.3	0.0572
		21.3	0.0064
32	VGL3008	11	0.0005
		13	0.1391
		14	0.0270
		15	0.6212
		16	0.0101
		17	0.0018
		18	0.1038
		19	0.0865
		20	0.0087
		21	0.0014
33	VGL3235	12	0.0357
		13	0.3911
		14	0.3673
		15	0.0215
		16	0.1244
		17	0.0156
		18	0.0444

Standard genetic assessment based on 33 autosomal STR loci

Doberman Pinscher

		N	Na	Ne	Ho	He	F
	Mean	1094	7.939	2.319	0.469	0.505	0.070
	SE		0.393	0.140	0.032	0.034	0.009

Standard genetic assessment based on 7 STRs in the DLA region

Doberman Pinscher

		N	Na	Ne	Ho	He	F
	Mean	1094	6.714	1.566	0.342	0.361	0.051
	SE		0.596	0.023	0.008	0.010	0.005

Standard genetic assessment for individual STR loci

Doberman Pinscher

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	1094	8	1.456	0.291	0.313	0.071
2	AHT137	1094	10	2.609	0.615	0.617	0.003
3	AHTH130	1094	9	1.823	0.420	0.452	0.071
4	AHTh171-A	1094	7	2.321	0.540	0.569	0.052
5	AHTh260	1094	8	1.330	0.237	0.248	0.046
6	AHTk211	1094	6	1.272	0.196	0.214	0.085
7	AHTk253	1094	5	1.741	0.309	0.426	0.274
8	C22.279	1094	9	3.615	0.658	0.723	0.091
9	FH2001	1094	6	1.102	0.091	0.093	0.023
10	FH2054	1094	8	1.815	0.430	0.449	0.042
11	FH2848	1094	8	1.114	0.086	0.102	0.157
12	INRA21	1094	5	1.342	0.252	0.255	0.013
13	INU005	1094	5	2.982	0.642	0.665	0.034
14	INU030	1094	4	2.346	0.556	0.574	0.030
15	INU055	1094	7	2.727	0.557	0.633	0.120
16	LEI004	1094	5	1.974	0.477	0.494	0.034
17	REN105L03	1094	8	1.118	0.102	0.106	0.031
18	REN162C04	1094	9	2.319	0.548	0.569	0.036
19	REN169D01	1094	8	3.919	0.656	0.745	0.119
20	REN169O18	1094	8	2.855	0.600	0.650	0.077
21	REN247M23	1094	4	1.283	0.213	0.221	0.035
22	REN54P11	1094	9	2.468	0.548	0.595	0.079
23	REN64E19	1094	7	2.396	0.530	0.583	0.091
24	VGL0760	1094	12	3.980	0.685	0.749	0.085
25	VGL0910	1094	11	1.919	0.457	0.479	0.045
26	VGL1063	1094	11	2.929	0.612	0.659	0.071
27	VGL1165	1094	13	2.646	0.573	0.622	0.079
28	VGL1828	1094	8	2.442	0.587	0.590	0.005
29	VGL2009	1094	7	2.785	0.606	0.641	0.055
30	VGL2409	1094	8	3.463	0.627	0.711	0.119
31	VGL2918	1094	12	2.831	0.576	0.647	0.109
32	VGL3008	1094	10	2.356	0.565	0.576	0.019
33	VGL3235	1094	7	3.254	0.623	0.693	0.100

Standard genetic assessment for 7 STRs in the DLA region

Doberman Pinscher

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	1094	10	1.616	0.362	0.381	0.049
2	DLA I-4ACA	1094	7	1.664	0.369	0.399	0.076
3	DLA I-4BCT	1094	5	1.461	0.302	0.315	0.043
4	DLA1131	1094	7	1.542	0.330	0.351	0.060
5	5ACA	1094	5	1.518	0.331	0.341	0.029
6	5ACT	1094	7	1.596	0.357	0.374	0.045
7	5BCA	1094	6	1.568	0.341	0.362	0.058

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Doberman Pinscher

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Doberman Pinscher

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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