Statistics and Breed-wide Allele Frequency - Doberman Pinscher

Updated Aug 9, 2020

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Doberman Pinscher (n=740)
1012	388 369 289 188	0.0007
1016	382 371 277 178	0.0182
1017	386 373 289 178	0.0811
1030	380 373 293 178	0.1027
1040	380 371 277 186	0.0108
1052	380 372 289 184	0.0014
1091	381 371 277 181	0.0014
1094	395 375 277 176	0.7493
1105	382 379 277 178	0.0007
1114	380 373 287 183	0.0014
1116	380 365 289 186	0.0014
1150	395 379 277 176	0.0230
1159	395 379 277 181	0.0007
1174	399 375 277 176	0.0041
1190	386 373 291 178	0.0007
1214	397 375 277 176	0.0014
1245	395 375 289 178	0.0014

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Doberman Pinscher (n=740)
2003	343 324 282	0.0007
2011	345 322 284	0.0007
2022	339 327 282	0.0014
2023	341 323 282	0.1027
2024	343 323 280	0.0007
2033	339 323 282	0.0007
2039	345 327 276	0.0101
2053	343 324 280	0.0007
2072	339 325 282	0.0014
2087	347 324 280	0.0014
2089	343 331 276	0.7723
2090	339 322 278	0.0804
2091	343 327 288	0.0182
2092	343 331 278	0.0034
2094	339 322 276	0.0027
2112	341 331 276	0.0027

Allele Frequencies

#	Locus Name	Allele	Doberman Pinscher (n=744)
1	AHT121	92	0.0013
		96	0.8028
		98	0.1561
		100	0.0249
		102	0.0081
		104	0.0020
		108	0.0020
		112	0.0027
2	AHT137	131	0.4993
		133	0.0020
		135	0.0013
		137	0.0820
		143	0.0007
		145	0.0007
		147	0.3401
		149	0.0504
		151	0.0074
		153	0.0161
3	AHTH130	117	0.0007
		119	0.7009
		121	0.0188
		123	0.2372
		125	0.0013
		127	0.0020
		129	0.0336
		131	0.0007
		133	0.0047
4	AHTh171-A	219	0.6265
		223	0.0013
		225	0.0229
		227	0.1575
		229	0.1184
		233	0.0666
		241	0.0067
5	AHTh260	238	0.8723
		240	0.0007
		242	0.0027
		244	0.0215
		246	0.0867
		248	0.0121
		252	0.0034
		254	0.0007
6	AHTk211	87	0.0027
		89	0.1070
		91	0.8836
		93	0.0054
		95	0.0007
		97	0.0007
7	AHTk253	284	0.0007
		286	0.2773
		288	0.0135
		290	0.7059
		292	0.0027
8	C22.279	110	0.0007
		114	0.1999
		116	0.0013
		118	0.2651
		120	0.1353
		124	0.0108
		126	0.3802
		128	0.0067
9	FH2001	132	0.0195
		136	0.0007
		140	0.0020
		144	0.9569
		148	0.0202
		152	0.0007
10	FH2054	144	0.0162
		148	0.0027
		152	0.6958
		156	0.0343
		160	0.0007
		164	0.0020
		168	0.2436
		172	0.0047
11	FH2848	234	0.0013
		238	0.0316
		240	0.0114
		242	0.0040
		244	0.9503
		246	0.0007
		248	0.0007
12	INRA21	91	0.0007
		95	0.0585
		99	0.0316
		101	0.8654
		105	0.0437
13	INU005	110	0.0040
		122	0.4098
		124	0.3297
		126	0.2396
		132	0.0168
14	INU030	144	0.2699
		146	0.0013
		150	0.5808
		152	0.1480
15	INU055	210	0.3311
		212	0.0034
		216	0.1709
		218	0.4812
		220	0.0013
		222	0.0121
16	LEI004	85	0.6763
		95	0.0034
		97	0.1427
		103	0.0027
		107	0.1750
17	REN105L03	227	0.0074
		231	0.0027
		233	0.0007
		235	0.9509
		237	0.0235
		239	0.0027
		241	0.0114
		245	0.0007
18	REN162C04	200	0.0336
		202	0.6036
		204	0.0020
		206	0.0451
		208	0.0350
		210	0.0007
		212	0.2416
		214	0.0027
		216	0.0357
19	REN169D01	202	0.0524
		210	0.0007
		212	0.3340
		214	0.1680
		216	0.3179
		218	0.0074
		220	0.1196
20	REN169O18	158	0.0517
		162	0.5168
		164	0.0013
		166	0.0034
		168	0.2278
		170	0.1828
		172	0.0161
21	REN247M23	268	0.1270
		270	0.0013
		272	0.8710
		274	0.0007
22	REN54P11	220	0.0007
		222	0.0013
		226	0.5168
		230	0.0027
		232	0.0034
		234	0.1427
		236	0.0040
		238	0.3284
23	REN64E19	139	0.0013
		143	0.0007
		145	0.5686
		147	0.2624
		149	0.0155
		153	0.1501
		155	0.0013
24	VGL0760	12	0.3022
		13	0.3001
		14	0.0020
		18.2	0.1750
		19.2	0.0047
		20.2	0.1972
		21.2	0.0101
		22	0.0007
		22.2	0.0020
		23.2	0.0047
		24.2	0.0007
		25.2	0.0007
25	VGL0910	15	0.0040
		16	0.0336
		16.1	0.0114
		17	0.0013
		17.1	0.0040
		18.1	0.0081
		19.1	0.7187
		20.1	0.1117
		21.1	0.0983
		22.1	0.0087
26	VGL1063	11	0.0007
		12	0.0013
		13	0.0061
		14	0.5162
		15	0.1447
		16	0.2147
		17	0.0162
		18	0.0740
		19	0.0188
		20	0.0067
		21	0.0007
27	VGL1165	18	0.0013
		20	0.0007
		21	0.0007
		22	0.0283
		25	0.0007
		26	0.0013
		27	0.0087
		28	0.3136
		29	0.5229
		30	0.0262
		31	0.0915
		32	0.0040
28	VGL1828	15	0.0040
		16	0.5639
		17	0.3277
		18	0.0074
		19	0.0074
		20	0.0727
		21	0.0162
		22	0.0007
29	VGL2009	9	0.0269
		11	0.4953
		12	0.0040
		13	0.0256
		14	0.2429
		15	0.2005
		16	0.0047
30	VGL2409	13	0.0007
		14	0.1878
		15	0.0040
		16	0.0020
		17	0.3345
		18	0.0518
		19	0.3816
		20	0.0377
31	VGL2918	12	0.0229
		13	0.0209
		14	0.3782
		15	0.4549
		16	0.0175
		16.3	0.0013
		17	0.0040
		17.3	0.0061
		18.3	0.0047
		19.3	0.0215
		20.3	0.0633
		21.3	0.0047
32	VGL3008	11	0.0007
		13	0.1359
		14	0.0229
		15	0.6319
		16	0.0067
		17	0.0007
		18	0.1023
		19	0.0902
		20	0.0074
		21	0.0013
33	VGL3235	12	0.0323
		13	0.3984
		14	0.3634
		15	0.0195
		16	0.1265
		17	0.0121
		18	0.0478

Standard genetic assessment based on 33 autosomal STR loci

		N	Na	Ne	Ho	He	F
Doberman Pinscher	Mean	744	7.697	2.310	0.462	0.502	0.080
	SE		0.377	0.140	0.032	0.034	0.011

Standard genetic assessment based on 7 STRs in the DLA region

		N	Na	Ne	Ho	He	F
Doberman Pinscher	Mean	744	6.571	1.573	0.341	0.363	0.061
	SE		0.489	0.019	0.006	0.008	0.004

Standard genetic assessment for individual STR loci

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	744	8	1.493	0.306	0.330	0.075
2	AHT137	744	10	2.670	0.622	0.625	0.005
3	AHTH130	744	9	1.821	0.425	0.451	0.058
4	AHTh171-A	744	7	2.292	0.506	0.564	0.102
5	AHTh260	744	8	1.300	0.224	0.231	0.028
6	AHTk211	744	6	1.262	0.192	0.208	0.074
7	AHTk253	744	5	1.738	0.293	0.425	0.309
8	C22.279	744	8	3.659	0.643	0.727	0.115
9	FH2001	744	6	1.091	0.079	0.083	0.049
10	FH2054	744	8	1.835	0.441	0.455	0.030
11	FH2848	744	7	1.106	0.071	0.096	0.257
12	INRA21	744	5	1.324	0.246	0.245	-0.006
13	INU005	744	5	2.991	0.635	0.666	0.046
14	INU030	744	4	2.315	0.553	0.568	0.026
15	INU055	744	6	2.699	0.534	0.629	0.151
16	LEI004	744	5	1.967	0.467	0.492	0.050
17	REN105L03	744	8	1.105	0.090	0.095	0.052
18	REN162C04	744	9	2.334	0.549	0.572	0.039
19	REN169D01	744	7	3.877	0.651	0.742	0.123
20	REN169O18	744	7	2.814	0.569	0.645	0.118
21	REN247M23	744	4	1.291	0.215	0.225	0.045
22	REN54P11	744	8	2.529	0.555	0.605	0.083
23	REN64E19	744	7	2.410	0.533	0.585	0.089
24	VGL0760	744	12	3.984	0.689	0.749	0.080
25	VGL0910	744	10	1.851	0.437	0.460	0.049
26	VGL1063	744	11	2.945	0.611	0.660	0.075
27	VGL1165	744	12	2.620	0.559	0.618	0.097
28	VGL1828	744	8	2.320	0.560	0.569	0.016
29	VGL2009	744	7	2.890	0.631	0.654	0.035
30	VGL2409	744	8	3.369	0.629	0.703	0.106
31	VGL2918	744	12	2.811	0.563	0.644	0.127
32	VGL3008	744	10	2.288	0.549	0.563	0.025
33	VGL3235	744	7	3.219	0.618	0.689	0.104

Standard genetic assessment for 7 STRs in the DLA region

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	744	9	1.616	0.355	0.381	0.068
2	DLA I-4ACA	744	7	1.647	0.363	0.393	0.075
3	DLA I-4BCT	744	5	1.487	0.311	0.328	0.051
4	DLA1131	744	7	1.550	0.334	0.355	0.059
5	5ACA	744	5	1.535	0.334	0.348	0.042
6	5ACT	744	7	1.605	0.354	0.377	0.061
7	5BCA	744	6	1.568	0.338	0.362	0.068

Veterinary Genetics Laboratory

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Statistics and Breed-wide Allele Frequency - Doberman Pinscher

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Doberman Pinscher

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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