Statistics and Breed-wide Allele Frequency - Flat Coated Retriever

Updated Aug 9, 2020

DLA Class I Haplotype Frequencies

DLA1 #STR typesFlat Coated Retriever (n=597)
1017386 373 289 1780.4447
1035386 373 277 1840.0050
1054382 379 277 1840.1122
1065380 371 277 1810.0008
1066376 375 277 1780.0008
1067376 373 277 1780.0008
1068380 373 287 1810.2772
1142376 379 277 1800.1466
1143386 373 287 1810.0050
1170386 373 277 1800.0008
1171380 373 287 1840.0008
1199380 373 285 1810.0050

DLA Class II Haplotype Frequencies

DLA2 #STR typesFlat Coated Retriever (n=597)
2003343 324 2820.1491
2005339 322 2800.4171
2014339 322 2840.0285
2017343 322 2800.0008
2018339 324 2840.1466
2022339 327 2820.1173
2046339 329 2800.0008
2048339 331 2820.0008
2053343 324 2800.1357
2066339 324 2800.0008
2083339 324 2820.0025

Allele Frequencies

#Locus NameAlleleFlat Coated Retriever (n=597)
1AHT121 940.0008
960.1390
980.0461
1000.0025
1020.4523
1040.3484
1060.0075
1080.0034
2AHT137 1310.2136
1330.0008
1370.4966
1470.1432
1490.1415
1510.0042
3AHTH130 1210.4564
1250.0218
1270.3333
1290.1876
1350.0008
4AHTh171-A 2190.7730
2210.1608
2250.0536
2270.0117
2370.0008
5AHTh260 2400.4958
2440.0092
2460.4791
2480.0159
6AHTk211 890.0008
910.2948
930.1767
950.0578
970.4698
7AHTk253 2800.2069
2860.0486
2880.1080
2920.6307
2960.0059
8C22.279 1160.4883
1180.2094
1200.2647
1220.0008
1260.0369
9FH2001 1240.0101
1320.6173
1360.0771
1400.0260
1440.0008
1480.0251
1520.2412
1560.0025
10FH2054 1480.0008
1520.0796
1560.2345
1600.0184
1640.6474
1680.0134
1720.0059
11FH2848 2320.0662
2340.0034
2360.0025
2380.6374
2400.1499
2420.1407
12INRA21 910.0092
950.2245
970.1499
990.2328
1010.3827
1030.0008
13INU005 1240.1231
1260.3961
1280.4807
14INU030 1440.7663
1480.0008
1500.2328
15INU055 2100.7864
2140.1549
2180.0570
2200.0017
16LEI004 950.9054
970.0586
1050.0008
1070.0352
17REN105L03 2310.0117
2330.4590
2350.4506
2410.0787
18REN162C04 2000.1097
2020.5134
2040.0025
2060.0972
2080.2772
19REN169D01 2020.0812
2100.0050
2120.2948
2140.0888
2160.3325
2180.1926
2200.0050
20REN169O18 1560.0008
1600.0017
1620.2630
1640.2806
1660.0017
1680.1357
1700.2345
1740.0821
21REN247M23 2680.4615
2700.5377
2780.0008
22REN54P11 2220.2714
2260.4514
2420.0034
2440.2739
23REN64E19 1430.0134
1450.0385
1470.3719
1490.2990
1530.2772
24VGL0760 120.0117
130.0050
17.20.0017
180.0034
18.20.0101
190.0796
19.20.4363
200.0059
20.20.0444
210.0628
21.20.2621
220.0101
22.20.0637
23.20.0034
25VGL0910 140.0142
150.0963
160.0034
18.10.0201
19.10.3652
20.10.0452
21.10.1449
22.10.2889
23.10.0218
26VGL1063 110.0025
130.0896
140.1156
150.0838
160.0050
170.0628
180.0637
190.5084
200.0687
27VGL1165 200.1457
210.0034
220.4028
230.0084
260.0059
270.2127
280.1533
290.0678
28VGL1828 150.0209
160.9682
170.0092
190.0008
200.0008
29VGL2009 100.0008
110.0050
120.0008
130.7940
140.0787
150.1206
30VGL2409 130.0712
150.0142
160.8744
170.0394
180.0008
31VGL2918 120.0603
130.5209
140.0754
150.0008
17.30.0452
18.30.0109
19.30.1742
20.30.1030
21.30.0092
32VGL3008 140.0008
170.0034
180.0218
190.6985
200.2580
210.0176
33VGL3235 120.2915
140.0528
150.1089
160.4531
170.0477
190.0461

Standard genetic assessment based on 33 autosomal STR loci

  NNaNeHoHeF
Flat Coated RetrieverMean5975.9702.6010.5510.5600.017
 SE 0.3890.1530.0300.0310.007

Standard genetic assessment based on 7 STRs in the DLA region

  NNaNeHoHeF
Flat Coated RetrieverMean5973.7142.4770.5440.5700.044
 SE 0.3330.2180.0400.0430.010

Standard genetic assessment for individual STR loci

#LocusNNaNeHoHeF
1AHT12159782.8780.6160.6530.055
2AHT13759763.0040.6250.6670.064
3AHTH13059752.8160.6300.6450.023
4AHTh171-A59751.5960.3820.374-0.022
5AHTh26059742.1020.5280.524-0.006
6AHTk21159752.9220.6200.6580.058
7AHTk25359752.2000.5280.5450.033
8C22.27959752.8280.6680.646-0.034
9FH200159782.2390.5480.5530.010
10FH205459772.0790.4990.5190.038
11FH284859762.2080.5480.547-0.001
12INRA2159763.6540.7090.7260.025
13INU00559732.4800.6200.597-0.038
14INU03059731.5590.3520.3590.019
15INU05559741.5490.3320.3540.064
16LEI00459741.2130.1790.176-0.020
17REN105L0359742.3810.5960.580-0.028
18REN162C0459752.7630.5880.6380.079
19REN169D0159774.0140.7620.751-0.015
20REN169O1859784.3860.7400.7720.041
21REN247M2359731.9920.4670.4980.061
22REN54P1159742.8370.6750.648-0.042
23REN64E1959753.2660.6530.6940.058
24VGL0760597143.6250.7240.7240.001
25VGL091059793.9960.7150.7500.046
26VGL106359793.3380.6780.7000.031
27VGL116559783.8910.7290.7430.019
28VGL182859751.0660.0550.0620.110
29VGL200959761.5360.3500.349-0.004
30VGL240959751.2960.2400.229-0.048
31VGL291859793.0870.6830.676-0.011
32VGL300859761.8010.4540.445-0.021
33VGL323559763.2330.6780.6910.018

Standard genetic assessment for 7 STRs in the DLA region

#LocusNNaNeHoHeF
1DLA I-3CCA59743.0980.6530.6770.035
2DLA I-4ACA59741.6290.3890.386-0.006
3DLA I-4BCT59742.8630.6180.6510.050
4DLA113159743.1450.6500.6820.047
55ACA59721.6890.3800.4080.068
65ACT59752.4880.5490.5980.081
75BCA59732.4290.5700.5880.032