Statistics and Breed-wide Allele Frequency - Flat Coated Retriever

Updated Aug 9, 2020

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Flat Coated Retriever (n=597)
1017	386 373 289 178	0.4447
1035	386 373 277 184	0.0050
1054	382 379 277 184	0.1122
1065	380 371 277 181	0.0008
1066	376 375 277 178	0.0008
1067	376 373 277 178	0.0008
1068	380 373 287 181	0.2772
1142	376 379 277 180	0.1466
1143	386 373 287 181	0.0050
1170	386 373 277 180	0.0008
1171	380 373 287 184	0.0008
1199	380 373 285 181	0.0050

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Flat Coated Retriever (n=597)
2003	343 324 282	0.1491
2005	339 322 280	0.4171
2014	339 322 284	0.0285
2017	343 322 280	0.0008
2018	339 324 284	0.1466
2022	339 327 282	0.1173
2046	339 329 280	0.0008
2048	339 331 282	0.0008
2053	343 324 280	0.1357
2066	339 324 280	0.0008
2083	339 324 282	0.0025

Allele Frequencies

#	Locus Name	Allele	Flat Coated Retriever (n=597)
1	AHT121	94	0.0008
		96	0.1390
		98	0.0461
		100	0.0025
		102	0.4523
		104	0.3484
		106	0.0075
		108	0.0034
2	AHT137	131	0.2136
		133	0.0008
		137	0.4966
		147	0.1432
		149	0.1415
		151	0.0042
3	AHTH130	121	0.4564
		125	0.0218
		127	0.3333
		129	0.1876
		135	0.0008
4	AHTh171-A	219	0.7730
		221	0.1608
		225	0.0536
		227	0.0117
		237	0.0008
5	AHTh260	240	0.4958
		244	0.0092
		246	0.4791
		248	0.0159
6	AHTk211	89	0.0008
		91	0.2948
		93	0.1767
		95	0.0578
		97	0.4698
7	AHTk253	280	0.2069
		286	0.0486
		288	0.1080
		292	0.6307
		296	0.0059
8	C22.279	116	0.4883
		118	0.2094
		120	0.2647
		122	0.0008
		126	0.0369
9	FH2001	124	0.0101
		132	0.6173
		136	0.0771
		140	0.0260
		144	0.0008
		148	0.0251
		152	0.2412
		156	0.0025
10	FH2054	148	0.0008
		152	0.0796
		156	0.2345
		160	0.0184
		164	0.6474
		168	0.0134
		172	0.0059
11	FH2848	232	0.0662
		234	0.0034
		236	0.0025
		238	0.6374
		240	0.1499
		242	0.1407
12	INRA21	91	0.0092
		95	0.2245
		97	0.1499
		99	0.2328
		101	0.3827
		103	0.0008
13	INU005	124	0.1231
		126	0.3961
		128	0.4807
14	INU030	144	0.7663
		148	0.0008
		150	0.2328
15	INU055	210	0.7864
		214	0.1549
		218	0.0570
		220	0.0017
16	LEI004	95	0.9054
		97	0.0586
		105	0.0008
		107	0.0352
17	REN105L03	231	0.0117
		233	0.4590
		235	0.4506
		241	0.0787
18	REN162C04	200	0.1097
		202	0.5134
		204	0.0025
		206	0.0972
		208	0.2772
19	REN169D01	202	0.0812
		210	0.0050
		212	0.2948
		214	0.0888
		216	0.3325
		218	0.1926
		220	0.0050
20	REN169O18	156	0.0008
		160	0.0017
		162	0.2630
		164	0.2806
		166	0.0017
		168	0.1357
		170	0.2345
		174	0.0821
21	REN247M23	268	0.4615
		270	0.5377
		278	0.0008
22	REN54P11	222	0.2714
		226	0.4514
		242	0.0034
		244	0.2739
23	REN64E19	143	0.0134
		145	0.0385
		147	0.3719
		149	0.2990
		153	0.2772
24	VGL0760	12	0.0117
		13	0.0050
		17.2	0.0017
		18	0.0034
		18.2	0.0101
		19	0.0796
		19.2	0.4363
		20	0.0059
		20.2	0.0444
		21	0.0628
		21.2	0.2621
		22	0.0101
		22.2	0.0637
		23.2	0.0034
25	VGL0910	14	0.0142
		15	0.0963
		16	0.0034
		18.1	0.0201
		19.1	0.3652
		20.1	0.0452
		21.1	0.1449
		22.1	0.2889
		23.1	0.0218
26	VGL1063	11	0.0025
		13	0.0896
		14	0.1156
		15	0.0838
		16	0.0050
		17	0.0628
		18	0.0637
		19	0.5084
		20	0.0687
27	VGL1165	20	0.1457
		21	0.0034
		22	0.4028
		23	0.0084
		26	0.0059
		27	0.2127
		28	0.1533
		29	0.0678
28	VGL1828	15	0.0209
		16	0.9682
		17	0.0092
		19	0.0008
		20	0.0008
29	VGL2009	10	0.0008
		11	0.0050
		12	0.0008
		13	0.7940
		14	0.0787
		15	0.1206
30	VGL2409	13	0.0712
		15	0.0142
		16	0.8744
		17	0.0394
		18	0.0008
31	VGL2918	12	0.0603
		13	0.5209
		14	0.0754
		15	0.0008
		17.3	0.0452
		18.3	0.0109
		19.3	0.1742
		20.3	0.1030
		21.3	0.0092
32	VGL3008	14	0.0008
		17	0.0034
		18	0.0218
		19	0.6985
		20	0.2580
		21	0.0176
33	VGL3235	12	0.2915
		14	0.0528
		15	0.1089
		16	0.4531
		17	0.0477
		19	0.0461

Standard genetic assessment based on 33 autosomal STR loci

		N	Na	Ne	Ho	He	F
Flat Coated Retriever	Mean	597	5.970	2.601	0.551	0.560	0.017
	SE		0.389	0.153	0.030	0.031	0.007

Standard genetic assessment based on 7 STRs in the DLA region

		N	Na	Ne	Ho	He	F
Flat Coated Retriever	Mean	597	3.714	2.477	0.544	0.570	0.044
	SE		0.333	0.218	0.040	0.043	0.010

Standard genetic assessment for individual STR loci

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	597	8	2.878	0.616	0.653	0.055
2	AHT137	597	6	3.004	0.625	0.667	0.064
3	AHTH130	597	5	2.816	0.630	0.645	0.023
4	AHTh171-A	597	5	1.596	0.382	0.374	-0.022
5	AHTh260	597	4	2.102	0.528	0.524	-0.006
6	AHTk211	597	5	2.922	0.620	0.658	0.058
7	AHTk253	597	5	2.200	0.528	0.545	0.033
8	C22.279	597	5	2.828	0.668	0.646	-0.034
9	FH2001	597	8	2.239	0.548	0.553	0.010
10	FH2054	597	7	2.079	0.499	0.519	0.038
11	FH2848	597	6	2.208	0.548	0.547	-0.001
12	INRA21	597	6	3.654	0.709	0.726	0.025
13	INU005	597	3	2.480	0.620	0.597	-0.038
14	INU030	597	3	1.559	0.352	0.359	0.019
15	INU055	597	4	1.549	0.332	0.354	0.064
16	LEI004	597	4	1.213	0.179	0.176	-0.020
17	REN105L03	597	4	2.381	0.596	0.580	-0.028
18	REN162C04	597	5	2.763	0.588	0.638	0.079
19	REN169D01	597	7	4.014	0.762	0.751	-0.015
20	REN169O18	597	8	4.386	0.740	0.772	0.041
21	REN247M23	597	3	1.992	0.467	0.498	0.061
22	REN54P11	597	4	2.837	0.675	0.648	-0.042
23	REN64E19	597	5	3.266	0.653	0.694	0.058
24	VGL0760	597	14	3.625	0.724	0.724	0.001
25	VGL0910	597	9	3.996	0.715	0.750	0.046
26	VGL1063	597	9	3.338	0.678	0.700	0.031
27	VGL1165	597	8	3.891	0.729	0.743	0.019
28	VGL1828	597	5	1.066	0.055	0.062	0.110
29	VGL2009	597	6	1.536	0.350	0.349	-0.004
30	VGL2409	597	5	1.296	0.240	0.229	-0.048
31	VGL2918	597	9	3.087	0.683	0.676	-0.011
32	VGL3008	597	6	1.801	0.454	0.445	-0.021
33	VGL3235	597	6	3.233	0.678	0.691	0.018

Standard genetic assessment for 7 STRs in the DLA region

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	597	4	3.098	0.653	0.677	0.035
2	DLA I-4ACA	597	4	1.629	0.389	0.386	-0.006
3	DLA I-4BCT	597	4	2.863	0.618	0.651	0.050
4	DLA1131	597	4	3.145	0.650	0.682	0.047
5	5ACA	597	2	1.689	0.380	0.408	0.068
6	5ACT	597	5	2.488	0.549	0.598	0.081
7	5BCA	597	3	2.429	0.570	0.588	0.032

Veterinary Genetics Laboratory

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Statistics and Breed-wide Allele Frequency - Flat Coated Retriever

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Flat Coated Retriever

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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