Statistics and Breed-wide Allele Frequency - Flat Coated Retriever

Updated Sep 28, 2020

DLA Class I Haplotype Frequencies

DLA1 #STR typesFlat Coated Retriever (n=602)
1017386 373 289 1780.4468
1035386 373 277 1840.0050
1054382 379 277 1840.1113
1065380 371 277 1810.0008
1066376 375 277 1780.0008
1067376 373 277 1780.0008
1068380 373 287 1810.2774
1142376 379 277 1800.1453
1143386 373 287 1810.0050
1170386 373 277 1800.0008
1171380 373 287 1840.0008
1199380 373 285 1810.0050

DLA Class II Haplotype Frequencies

DLA2 #STR typesFlat Coated Retriever (n=602)
2003343 324 2820.1478
2005339 322 2800.4186
2014339 322 2840.0291
2017343 322 2800.0008
2018339 324 2840.1453
2022339 327 2820.1163
2046339 329 2800.0008
2048339 331 2820.0008
2053343 324 2800.1370
2066339 324 2800.0008
2083339 324 2820.0025

Allele Frequencies

#Locus NameAlleleFlat Coated Retriever (n=602)
1AHT121 940.0008
960.1379
980.0457
1000.0025
1020.4543
1040.3480
1060.0075
1080.0033
2AHT137 1310.2126
1330.0008
1370.4958
1470.1453
1490.1412
1510.0042
3AHTH130 1210.4568
1250.0216
1270.3314
1290.1894
1350.0008
4AHTh171-A 2190.7733
2210.1611
2250.0532
2270.0116
2370.0008
5AHTh260 2400.4967
2440.0091
2460.4784
2480.0158
6AHTk211 890.0008
910.2924
930.1777
950.0581
970.4709
7AHTk253 2800.2085
2860.0482
2880.1080
2920.6296
2960.0058
8C22.279 1160.4892
1180.2093
1200.2641
1220.0008
1260.0365
9FH2001 1240.0100
1320.6171
1360.0764
1400.0274
1440.0008
1480.0249
1520.2409
1560.0025
10FH2054 1480.0008
1520.0806
1560.2334
1600.0183
1640.6478
1680.0133
1720.0058
11FH2848 2320.0656
2340.0033
2360.0025
2380.6395
2400.1487
2420.1404
12INRA21 910.0091
950.2243
970.1503
990.2317
1010.3837
1030.0008
13INU005 1240.1221
1260.3962
1280.4817
14INU030 1440.7666
1480.0008
1500.2326
15INU055 2100.7882
2140.1537
2180.0565
2200.0017
16LEI004 950.9061
970.0581
1050.0008
1070.0349
17REN105L03 2310.0116
2330.4576
2350.4527
2410.0781
18REN162C04 2000.1105
2020.5150
2040.0025
2060.0972
2080.2749
19REN169D01 2020.0814
2100.0050
2120.2932
2140.0880
2160.3331
2180.1944
2200.0050
20REN169O18 1560.0008
1600.0017
1620.2616
1640.2832
1660.0017
1680.1346
1700.2350
1740.0814
21REN247M23 2680.4626
2700.5365
2780.0008
22REN54P11 2220.2708
2260.4502
2420.0033
2440.2757
23REN64E19 1430.0133
1450.0382
1470.3729
1490.2982
1530.2774
24VGL0760 120.0116
130.0050
17.20.0017
180.0033
18.20.0100
190.0789
19.20.4352
200.0058
20.20.0440
210.0656
21.20.2625
220.0100
22.20.0631
23.20.0033
25VGL0910 140.0141
150.0963
160.0033
18.10.0199
19.10.3663
20.10.0457
21.10.1445
22.10.2882
23.10.0216
26VGL1063 110.0025
130.0897
140.1146
150.0831
160.0050
170.0623
180.0648
190.5091
200.0689
27VGL1165 200.1462
210.0033
220.4003
230.0083
260.0058
270.2135
280.1537
290.0689
28VGL1828 150.0208
160.9684
170.0091
190.0008
200.0008
29VGL2009 100.0008
110.0050
120.0008
130.7949
140.0781
150.1204
30VGL2409 130.0714
150.0141
160.8729
170.0399
180.0017
31VGL2918 120.0606
130.5216
140.0756
150.0008
17.30.0449
18.30.0108
19.30.1728
20.30.1038
21.30.0091
32VGL3008 140.0008
170.0033
180.0216
190.6993
200.2575
210.0174
33VGL3235 120.2932
140.0523
150.1096
160.4518
170.0473
190.0457

Standard genetic assessment based on 33 autosomal STR loci

  NNaNeHoHeF
Flat Coated RetrieverMean6025.9702.6000.5510.5600.017
 SE 0.3890.1530.0300.0310.007

Standard genetic assessment based on 7 STRs in the DLA region

  NNaNeHoHeF
Flat Coated RetrieverMean6023.7142.4700.5410.5690.047
 SE 0.3330.2160.0400.0430.010

Standard genetic assessment for individual STR loci

#LocusNNaNeHoHeF
1AHT12160282.8680.6160.6510.054
2AHT13760263.0110.6260.6680.062
3AHTH13060252.8180.6310.6450.022
4AHTh171-A60251.5950.3820.373-0.024
5AHTh26060242.1010.5270.524-0.005
6AHTk21160252.9220.6210.6580.056
7AHTk25360252.2030.5320.5460.027
8C22.27960252.8230.6690.646-0.037
9FH200160282.2410.5500.5540.007
10FH205460272.0780.5000.5190.036
11FH284860262.1970.5450.5450.000
12INRA2160263.6510.7080.7260.025
13INU00560232.4760.6180.596-0.037
14INU03060231.5580.3520.3580.017
15INU05560241.5430.3290.3520.065
16LEI00460241.2110.1780.174-0.020
17REN105L0360242.3780.5960.579-0.029
18REN162C0460252.7590.5880.6380.078
19REN169D0160274.0150.7640.751-0.018
20REN169O1860284.3740.7390.7710.042
21REN247M2360231.9920.4670.4980.063
22REN54P1160242.8410.6760.648-0.043
23REN64E1960253.2620.6530.6930.059
24VGL0760602143.6340.7260.725-0.001
25VGL091060293.9910.7140.7490.047
26VGL106360293.3320.6780.7000.032
27VGL116560283.9110.7290.7440.020
28VGL182860251.0660.0550.0620.110
29VGL200960261.5330.3490.348-0.004
30VGL240960251.3010.2410.231-0.042
31VGL291860293.0840.6840.676-0.013
32VGL300860261.7980.4530.444-0.022
33VGL323560263.2340.6780.6910.019

Standard genetic assessment for 7 STRs in the DLA region

#LocusNNaNeHoHeF
1DLA I-3CCA60243.0850.6500.6760.039
2DLA I-4ACA60241.6230.3850.384-0.004
3DLA I-4BCT60242.8560.6150.6500.054
4DLA113160243.1320.6460.6810.051
55ACA60221.6900.3790.4080.072
65ACT60252.4840.5470.5970.085
75BCA60232.4190.5660.5870.034