Statistics and Breed-wide Allele Frequency - Flat Coated Retriever

Updated Sep 28, 2020

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Flat Coated Retriever (n=602)
1017	386 373 289 178	0.4468
1035	386 373 277 184	0.0050
1054	382 379 277 184	0.1113
1065	380 371 277 181	0.0008
1066	376 375 277 178	0.0008
1067	376 373 277 178	0.0008
1068	380 373 287 181	0.2774
1142	376 379 277 180	0.1453
1143	386 373 287 181	0.0050
1170	386 373 277 180	0.0008
1171	380 373 287 184	0.0008
1199	380 373 285 181	0.0050

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Flat Coated Retriever (n=602)
2003	343 324 282	0.1478
2005	339 322 280	0.4186
2014	339 322 284	0.0291
2017	343 322 280	0.0008
2018	339 324 284	0.1453
2022	339 327 282	0.1163
2046	339 329 280	0.0008
2048	339 331 282	0.0008
2053	343 324 280	0.1370
2066	339 324 280	0.0008
2083	339 324 282	0.0025

Allele Frequencies

#	Locus Name	Allele	Flat Coated Retriever (n=602)
1	AHT121	94	0.0008
		96	0.1379
		98	0.0457
		100	0.0025
		102	0.4543
		104	0.3480
		106	0.0075
		108	0.0033
2	AHT137	131	0.2126
		133	0.0008
		137	0.4958
		147	0.1453
		149	0.1412
		151	0.0042
3	AHTH130	121	0.4568
		125	0.0216
		127	0.3314
		129	0.1894
		135	0.0008
4	AHTh171-A	219	0.7733
		221	0.1611
		225	0.0532
		227	0.0116
		237	0.0008
5	AHTh260	240	0.4967
		244	0.0091
		246	0.4784
		248	0.0158
6	AHTk211	89	0.0008
		91	0.2924
		93	0.1777
		95	0.0581
		97	0.4709
7	AHTk253	280	0.2085
		286	0.0482
		288	0.1080
		292	0.6296
		296	0.0058
8	C22.279	116	0.4892
		118	0.2093
		120	0.2641
		122	0.0008
		126	0.0365
9	FH2001	124	0.0100
		132	0.6171
		136	0.0764
		140	0.0274
		144	0.0008
		148	0.0249
		152	0.2409
		156	0.0025
10	FH2054	148	0.0008
		152	0.0806
		156	0.2334
		160	0.0183
		164	0.6478
		168	0.0133
		172	0.0058
11	FH2848	232	0.0656
		234	0.0033
		236	0.0025
		238	0.6395
		240	0.1487
		242	0.1404
12	INRA21	91	0.0091
		95	0.2243
		97	0.1503
		99	0.2317
		101	0.3837
		103	0.0008
13	INU005	124	0.1221
		126	0.3962
		128	0.4817
14	INU030	144	0.7666
		148	0.0008
		150	0.2326
15	INU055	210	0.7882
		214	0.1537
		218	0.0565
		220	0.0017
16	LEI004	95	0.9061
		97	0.0581
		105	0.0008
		107	0.0349
17	REN105L03	231	0.0116
		233	0.4576
		235	0.4527
		241	0.0781
18	REN162C04	200	0.1105
		202	0.5150
		204	0.0025
		206	0.0972
		208	0.2749
19	REN169D01	202	0.0814
		210	0.0050
		212	0.2932
		214	0.0880
		216	0.3331
		218	0.1944
		220	0.0050
20	REN169O18	156	0.0008
		160	0.0017
		162	0.2616
		164	0.2832
		166	0.0017
		168	0.1346
		170	0.2350
		174	0.0814
21	REN247M23	268	0.4626
		270	0.5365
		278	0.0008
22	REN54P11	222	0.2708
		226	0.4502
		242	0.0033
		244	0.2757
23	REN64E19	143	0.0133
		145	0.0382
		147	0.3729
		149	0.2982
		153	0.2774
24	VGL0760	12	0.0116
		13	0.0050
		17.2	0.0017
		18	0.0033
		18.2	0.0100
		19	0.0789
		19.2	0.4352
		20	0.0058
		20.2	0.0440
		21	0.0656
		21.2	0.2625
		22	0.0100
		22.2	0.0631
		23.2	0.0033
25	VGL0910	14	0.0141
		15	0.0963
		16	0.0033
		18.1	0.0199
		19.1	0.3663
		20.1	0.0457
		21.1	0.1445
		22.1	0.2882
		23.1	0.0216
26	VGL1063	11	0.0025
		13	0.0897
		14	0.1146
		15	0.0831
		16	0.0050
		17	0.0623
		18	0.0648
		19	0.5091
		20	0.0689
27	VGL1165	20	0.1462
		21	0.0033
		22	0.4003
		23	0.0083
		26	0.0058
		27	0.2135
		28	0.1537
		29	0.0689
28	VGL1828	15	0.0208
		16	0.9684
		17	0.0091
		19	0.0008
		20	0.0008
29	VGL2009	10	0.0008
		11	0.0050
		12	0.0008
		13	0.7949
		14	0.0781
		15	0.1204
30	VGL2409	13	0.0714
		15	0.0141
		16	0.8729
		17	0.0399
		18	0.0017
31	VGL2918	12	0.0606
		13	0.5216
		14	0.0756
		15	0.0008
		17.3	0.0449
		18.3	0.0108
		19.3	0.1728
		20.3	0.1038
		21.3	0.0091
32	VGL3008	14	0.0008
		17	0.0033
		18	0.0216
		19	0.6993
		20	0.2575
		21	0.0174
33	VGL3235	12	0.2932
		14	0.0523
		15	0.1096
		16	0.4518
		17	0.0473
		19	0.0457

Standard genetic assessment based on 33 autosomal STR loci

		N	Na	Ne	Ho	He	F
Flat Coated Retriever	Mean	602	5.970	2.600	0.551	0.560	0.017
	SE		0.389	0.153	0.030	0.031	0.007

Standard genetic assessment based on 7 STRs in the DLA region

		N	Na	Ne	Ho	He	F
Flat Coated Retriever	Mean	602	3.714	2.470	0.541	0.569	0.047
	SE		0.333	0.216	0.040	0.043	0.010

Standard genetic assessment for individual STR loci

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	602	8	2.868	0.616	0.651	0.054
2	AHT137	602	6	3.011	0.626	0.668	0.062
3	AHTH130	602	5	2.818	0.631	0.645	0.022
4	AHTh171-A	602	5	1.595	0.382	0.373	-0.024
5	AHTh260	602	4	2.101	0.527	0.524	-0.005
6	AHTk211	602	5	2.922	0.621	0.658	0.056
7	AHTk253	602	5	2.203	0.532	0.546	0.027
8	C22.279	602	5	2.823	0.669	0.646	-0.037
9	FH2001	602	8	2.241	0.550	0.554	0.007
10	FH2054	602	7	2.078	0.500	0.519	0.036
11	FH2848	602	6	2.197	0.545	0.545	0.000
12	INRA21	602	6	3.651	0.708	0.726	0.025
13	INU005	602	3	2.476	0.618	0.596	-0.037
14	INU030	602	3	1.558	0.352	0.358	0.017
15	INU055	602	4	1.543	0.329	0.352	0.065
16	LEI004	602	4	1.211	0.178	0.174	-0.020
17	REN105L03	602	4	2.378	0.596	0.579	-0.029
18	REN162C04	602	5	2.759	0.588	0.638	0.078
19	REN169D01	602	7	4.015	0.764	0.751	-0.018
20	REN169O18	602	8	4.374	0.739	0.771	0.042
21	REN247M23	602	3	1.992	0.467	0.498	0.063
22	REN54P11	602	4	2.841	0.676	0.648	-0.043
23	REN64E19	602	5	3.262	0.653	0.693	0.059
24	VGL0760	602	14	3.634	0.726	0.725	-0.001
25	VGL0910	602	9	3.991	0.714	0.749	0.047
26	VGL1063	602	9	3.332	0.678	0.700	0.032
27	VGL1165	602	8	3.911	0.729	0.744	0.020
28	VGL1828	602	5	1.066	0.055	0.062	0.110
29	VGL2009	602	6	1.533	0.349	0.348	-0.004
30	VGL2409	602	5	1.301	0.241	0.231	-0.042
31	VGL2918	602	9	3.084	0.684	0.676	-0.013
32	VGL3008	602	6	1.798	0.453	0.444	-0.022
33	VGL3235	602	6	3.234	0.678	0.691	0.019

Standard genetic assessment for 7 STRs in the DLA region

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	602	4	3.085	0.650	0.676	0.039
2	DLA I-4ACA	602	4	1.623	0.385	0.384	-0.004
3	DLA I-4BCT	602	4	2.856	0.615	0.650	0.054
4	DLA1131	602	4	3.132	0.646	0.681	0.051
5	5ACA	602	2	1.690	0.379	0.408	0.072
6	5ACT	602	5	2.484	0.547	0.597	0.085
7	5BCA	602	3	2.419	0.566	0.587	0.034

Veterinary Genetics Laboratory

Vet Med Links +

Statistics and Breed-wide Allele Frequency - Flat Coated Retriever

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Flat Coated Retriever

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Connect with us on social media