Statistics and Breed-wide Allele Frequency - Golden Retriever

Updated May 7, 2024

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Golden Retriever (n=902)
1002	380 365 281 181	0.0006
1003	387 375 277 186	0.1419
1006	387 375 293 180	0.0155
1008	386 373 289 182	0.0017
1011	376 365 281 180	0.0006
1012	388 369 289 188	0.0011
1014	375 373 287 178	0.0449
1016	382 371 277 178	0.0044
1030	380 373 293 178	0.0011
1040	380 371 277 186	0.0006
1050	380 371 289 182	0.0006
1059	390 371 291 182	0.0006
1062	382 371 277 183	0.0865
1065	380 371 277 181	0.2700
1066	376 375 277 178	0.2794
1067	376 373 277 178	0.0449
1068	380 373 287 181	0.0488
1069	380 365 281 184	0.0388
1070	380 375 291 178	0.0133
1071	380 373 277 178	0.0006
1121	380 371 277 183	0.0006
1128	384 376 287 182	0.0006
1129	382 371 277 181	0.0006
1134	384 365 291 178	0.0006
1137	383 371 281 184	0.0011
1144	390 369 289 182	0.0006
1145	392 373 281 186	0.0006

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Golden Retriever (n=902)
2001	343 324 284	0.1425
2003	343 324 282	0.0205
2005	339 322 280	0.0139
2007	351 327 280	0.0155
2012	345 322 280	0.0006
2017	343 322 280	0.0382
2021	339 324 268	0.0865
2022	339 327 282	0.0006
2023	341 323 282	0.0011
2029	337 324 268	0.0006
2037	341 327 280	0.0139
2045	339 325 284	0.0394
2046	339 329 280	0.2544
2047	339 331 280	0.0094
2048	339 331 282	0.2700
2049	339 331 284	0.0011
2050	341 327 284	0.0310
2051	343 331 282	0.0116
2052	345 321 280	0.0022
2053	343 324 280	0.0294
2059	343 324 276	0.0006
2079	343 323 278	0.0006
2085	345 325 280	0.0011
2086	339 329 284	0.0144
2088	339 329 268	0.0011

Allele Frequencies

#	Locus Name	Allele	Golden Retriever (n=903)
1	AHT121	90	0.0006
		96	0.2951
		98	0.0471
		100	0.0033
		102	0.4496
		104	0.0138
		106	0.1622
		108	0.0155
		110	0.0122
		112	0.0006
2	AHT137	131	0.1535
		133	0.1330
		135	0.0006
		137	0.1530
		141	0.0006
		143	0.1003
		145	0.0244
		147	0.1009
		149	0.1813
		151	0.1098
		153	0.0416
		155	0.0011
3	AHTH130	111	0.0006
		117	0.0394
		119	0.0011
		121	0.3559
		123	0.0017
		125	0.3016
		127	0.0022
		129	0.2960
		131	0.0017
4	AHTh171-A	219	0.6064
		221	0.0006
		223	0.0272
		225	0.1857
		227	0.1475
		229	0.0006
		233	0.0017
		235	0.0011
		237	0.0294
5	AHTh260	236	0.0006
		238	0.0039
		240	0.0188
		242	0.1242
		244	0.5443
		246	0.2162
		248	0.0715
		250	0.0028
		252	0.0022
		254	0.0155
6	AHTk211	87	0.0017
		89	0.0782
		91	0.1109
		93	0.6635
		95	0.0333
		97	0.1125
7	AHTk253	284	0.0033
		286	0.3570
		288	0.2683
		290	0.0122
		292	0.3592
8	C22.279	110	0.0006
		116	0.2265
		118	0.5100
		120	0.0698
		124	0.0410
		126	0.1523
9	FH2001	124	0.0903
		132	0.1999
		136	0.0299
		140	0.0449
		144	0.3571
		148	0.1678
		152	0.0930
		156	0.0161
		158	0.0006
		160	0.0006
10	FH2054	148	0.1657
		152	0.0144
		156	0.3542
		160	0.0499
		164	0.0233
		168	0.2400
		172	0.1325
		176	0.0194
		180	0.0006
11	FH2848	232	0.0765
		234	0.0399
		236	0.0277
		238	0.4579
		240	0.3963
		242	0.0011
		244	0.0006
12	INRA21	91	0.2223
		95	0.0898
		97	0.0089
		99	0.0776
		101	0.2905
		103	0.3093
		105	0.0017
13	INU005	110	0.1235
		122	0.0006
		124	0.2298
		126	0.5183
		128	0.1235
		132	0.0044
14	INU030	144	0.4052
		150	0.5061
		152	0.0887
15	INU055	210	0.1517
		212	0.0006
		214	0.4424
		216	0.2829
		218	0.1224
16	LEI004	85	0.0814
		93	0.0006
		95	0.3156
		97	0.0947
		105	0.0017
		107	0.5028
		109	0.0022
		111	0.0011
17	REN105L03	227	0.0017
		231	0.0793
		233	0.5543
		235	0.2223
		237	0.0078
		239	0.0488
		241	0.0854
		243	0.0006
18	REN162C04	202	0.0870
		204	0.3908
		206	0.2977
		208	0.2239
		212	0.0006
19	REN169D01	202	0.3570
		210	0.0011
		212	0.1386
		216	0.3836
		218	0.0887
		220	0.0310
20	REN169O18	160	0.0006
		162	0.3088
		164	0.3997
		166	0.0011
		168	0.0909
		170	0.1885
		172	0.0100
		174	0.0006
21	REN247M23	264	0.0011
		268	0.3758
		270	0.0017
		272	0.3997
		276	0.0011
		278	0.2206
22	REN54P11	222	0.0493
		226	0.0477
		228	0.0188
		230	0.0006
		232	0.2999
		234	0.4534
		236	0.1064
		238	0.0238
23	REN64E19	139	0.0293
		143	0.0066
		145	0.2813
		147	0.3549
		149	0.1877
		153	0.1395
		155	0.0006
24	VGL0760	12	0.0017
		13	0.0022
		14	0.0011
		18.2	0.0078
		19.2	0.1639
		20.2	0.1656
		21.2	0.3361
		22.2	0.0886
		23.2	0.2071
		24.2	0.0221
		25.2	0.0039
25	VGL0910	14	0.0116
		15	0.0172
		15.1	0.0199
		16	0.0044
		16.1	0.0028
		17.1	0.0454
		18.1	0.4435
		19	0.0044
		19.1	0.3073
		20	0.0044
		20.1	0.0360
		21	0.0006
		21.1	0.0781
		22.1	0.0238
		23.1	0.0006
26	VGL1063	8	0.0061
		9	0.0011
		12	0.0299
		13	0.6152
		14	0.0415
		15	0.0028
		17	0.0011
		18	0.2326
		19	0.0626
		20	0.0072
27	VGL1165	14	0.0011
		15	0.0006
		16	0.0919
		17	0.2187
		18	0.0089
		19	0.1362
		20	0.0011
		21	0.0354
		26	0.0022
		27	0.1107
		28	0.3223
		29	0.0138
		30	0.0526
		31	0.0044
28	VGL1828	14	0.1207
		15	0.0991
		16	0.0316
		17	0.0006
		18	0.0011
		19	0.4059
		20	0.1163
		21	0.0116
		22	0.2099
		23	0.0033
29	VGL2009	9	0.0006
		10	0.0033
		11	0.0072
		12	0.1484
		13	0.2209
		14	0.1816
		15	0.3804
		16	0.0570
		17	0.0006
30	VGL2409	13	0.0017
		14	0.1691
		15	0.0904
		16	0.3537
		17	0.3398
		18	0.0238
		19	0.0188
		20	0.0028
31	VGL2918	11	0.0006
		12	0.2885
		13	0.1107
		14	0.0072
		15	0.0006
		17.3	0.0188
		18.3	0.0083
		19.3	0.5122
		20.3	0.0504
		21.3	0.0017
		22.3	0.0011
32	VGL3008	13	0.0022
		14	0.4130
		15	0.0028
		16	0.0006
		17	0.0033
		18	0.0360
		19	0.2467
		20	0.0538
		21	0.0721
		22	0.0538
		23	0.0704
		24	0.0421
		25	0.0033
33	VGL3235	11	0.0006
		12	0.4268
		13	0.0061
		14	0.0599
		15	0.4152
		16	0.0377
		17	0.0277
		18	0.0261

Standard genetic assessment based on 33 autosomal STR loci

Golden Retriever

		N	Na	Ne	Ho	He	F
	Mean	903	8.455	3.423	0.652	0.687	0.051
	SE		0.466	0.179	0.014	0.013	0.006

Standard genetic assessment based on 7 STRs in the DLA region

Golden Retriever

		N	Na	Ne	Ho	He	F
	Mean	903	7.286	2.949	0.604	0.614	0.016
	SE		0.661	0.341	0.057	0.059	0.004

Standard genetic assessment for individual STR loci

Golden Retriever

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	903	10	3.141	0.629	0.682	0.077
2	AHT137	903	12	7.567	0.838	0.868	0.034
3	AHTH130	903	9	3.260	0.645	0.693	0.069
4	AHTh171-A	903	9	2.350	0.533	0.574	0.072
5	AHTh260	903	10	2.746	0.544	0.636	0.144
6	AHTk211	903	6	2.117	0.525	0.528	0.004
7	AHTk253	903	5	3.043	0.646	0.671	0.037
8	C22.279	903	6	2.932	0.598	0.659	0.092
9	FH2001	903	10	4.638	0.744	0.784	0.051
10	FH2054	903	9	4.316	0.753	0.768	0.020
11	FH2848	903	7	2.667	0.562	0.625	0.101
12	INRA21	903	7	4.105	0.757	0.756	-0.001
13	INU005	903	6	2.842	0.626	0.648	0.035
14	INU030	903	3	2.335	0.555	0.572	0.029
15	INU055	903	5	3.187	0.660	0.686	0.038
16	LEI004	903	8	2.717	0.604	0.632	0.045
17	REN105L03	903	8	2.683	0.575	0.627	0.083
18	REN162C04	903	5	3.344	0.634	0.701	0.095
19	REN169D01	903	6	3.305	0.653	0.697	0.064
20	REN169O18	903	8	3.345	0.710	0.701	-0.012
21	REN247M23	903	6	2.860	0.612	0.650	0.059
22	REN54P11	903	8	3.200	0.653	0.688	0.050
23	REN64E19	903	7	3.836	0.684	0.739	0.074
24	VGL0760	903	11	4.576	0.759	0.781	0.029
25	VGL0910	903	15	3.311	0.660	0.698	0.054
26	VGL1063	903	10	2.277	0.544	0.561	0.030
27	VGL1165	903	14	5.121	0.766	0.805	0.048
28	VGL1828	903	10	4.035	0.724	0.752	0.037
29	VGL2009	903	9	3.971	0.720	0.748	0.038
30	VGL2409	903	8	3.594	0.698	0.722	0.032
31	VGL2918	903	11	2.771	0.629	0.639	0.016
32	VGL3008	903	13	3.993	0.707	0.750	0.056
33	VGL3235	903	8	2.770	0.582	0.639	0.089

Standard genetic assessment for 7 STRs in the DLA region

Golden Retriever

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	903	11	3.556	0.712	0.719	0.009
2	DLA I-4ACA	903	6	2.800	0.642	0.643	0.001
3	DLA I-4BCT	903	6	1.432	0.301	0.302	0.002
4	DLA1131	903	8	3.528	0.692	0.717	0.034
5	5ACA	903	6	1.857	0.451	0.461	0.022
6	5ACT	903	8	4.086	0.734	0.755	0.028
7	5BCA	903	6	3.384	0.693	0.704	0.016

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Golden Retriever

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Golden Retriever

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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