Statistics and Breed-wide Allele Frequency - Golden Retriever

Updated Aug 9, 2020

DLA Class I Haplotype Frequencies

DLA1 #STR typesGolden Retriever (n=737)
1002380 365 281 1810.0007
1003387 375 277 1860.1391
1006387 375 293 1800.0136
1008386 373 289 1820.0014
1011376 365 281 1800.0007
1012388 369 289 1880.0014
1014375 373 287 1780.0400
1016382 371 277 1780.0020
1030380 373 293 1780.0007
1040380 371 277 1860.0007
1050380 371 289 1820.0007
1059390 371 291 1820.0007
1062382 371 277 1830.0889
1065380 371 277 1810.2632
1066376 375 277 1780.2863
1067376 373 277 1780.0488
1068380 373 287 1810.0516
1069380 365 281 1840.0387
1070380 375 291 1780.0149
1071380 373 277 1780.0007
1121380 371 277 1830.0007
1128384 376 287 1820.0007
1129382 371 277 1810.0007
1134384 365 291 1780.0007
1137383 371 281 1840.0014
1144390 369 289 1820.0007
1145392 373 281 1860.0007

DLA Class II Haplotype Frequencies

DLA2 #STR typesGolden Retriever (n=737)
2001343 324 2840.1398
2003343 324 2820.0224
2005339 322 2800.0156
2007351 327 2800.0136
2012345 322 2800.0007
2017343 322 2800.0407
2021339 324 2680.0889
2022339 327 2820.0007
2023341 323 2820.0007
2029337 324 2680.0007
2045339 325 2840.0393
2046339 329 2800.2748
2047339 331 2800.0109
2048339 331 2820.2605
2049339 331 2840.0014
2050341 327 2840.0400
2051343 331 2820.0115
2052345 321 2800.0020
2053343 324 2800.0305
2059343 324 2760.0007
2079343 323 2780.0007
2085345 325 2800.0014
2086339 329 2840.0014
2088339 329 2680.0014

Allele Frequencies

#Locus NameAlleleGolden Retriever (n=739)
1AHT121 900.0007
960.2882
980.0514
1000.0034
1020.4364
1040.0156
1060.1759
1080.0142
1100.0135
1120.0007
2AHT137 1310.1606
1330.1253
1350.0007
1370.1511
1410.0007
1430.0969
1450.0237
1470.0976
1490.1856
1510.1131
1530.0440
1550.0007
3AHTH130 1110.0007
1170.0366
1190.0014
1210.3482
1230.0014
1250.3117
1270.0027
1290.2954
1310.0020
4AHTh171-A 2190.6016
2210.0007
2230.0257
2250.1965
2270.1443
2290.0007
2330.0020
2350.0014
2370.0271
5AHTh260 2360.0007
2380.0047
2400.0190
2420.1206
2440.5596
2460.1944
2480.0806
2500.0034
2520.0027
2540.0142
6AHTk211 870.0020
890.0806
910.1131
930.6653
950.0332
970.1057
7AHTk253 2840.0034
2860.3598
2880.2778
2900.0081
2920.3509
8C22.279 1100.0007
1160.2246
1180.5230
1200.0683
1240.0447
1260.1387
9FH2001 1240.0907
1320.2009
1360.0325
1400.0447
1440.3593
1480.1658
1520.0893
1560.0156
1580.0007
1600.0007
10FH2054 1480.1660
1520.0149
1560.3415
1600.0495
1640.0217
1680.2453
1720.1396
1760.0210
1800.0007
11FH2848 2320.0711
2340.0420
2360.0257
2380.4512
2400.4085
2420.0007
2440.0007
12INRA21 910.2209
950.0962
970.0095
990.0671
1010.2825
1030.3218
1050.0020
13INU005 1100.1198
1220.0007
1240.2260
1260.5162
1280.1319
1320.0054
14INU030 1440.3991
1500.5169
1520.0840
15INU055 2100.1516
2120.0007
2140.4465
2160.2760
2180.1252
16LEI004 850.0792
930.0007
950.3173
970.1055
1050.0014
1070.4932
1090.0014
1110.0014
17REN105L03 2270.0020
2310.0799
2330.5630
2350.2066
2370.0081
2390.0488
2410.0915
18REN162C04 2020.0949
2040.3713
2060.2893
2080.2439
2120.0007
19REN169D01 2020.3449
2100.0014
2120.1430
2160.3902
2180.0901
2200.0305
20REN169O18 1600.0007
1620.2988
1640.4106
1660.0014
1680.0921
1700.1877
1720.0081
1740.0007
21REN247M23 2640.0014
2680.3808
2700.0020
2720.3930
2760.0014
2780.2215
22REN54P11 2220.0467
2260.0474
2280.0196
2300.0007
2320.3001
2340.4587
2360.1030
2380.0237
23REN64E19 1390.0345
1430.0068
1450.2957
1470.3451
1490.1834
1530.1340
1550.0007
24VGL0760 120.0020
130.0020
140.0014
18.20.0047
19.20.1633
20.20.1626
21.20.3313
22.20.0901
23.20.2154
24.20.0230
25.20.0041
25VGL0910 140.0115
150.0122
15.10.0237
160.0047
16.10.0034
17.10.0440
18.10.4478
190.0047
19.10.3028
200.0047
20.10.0373
210.0007
21.10.0752
22.10.0264
23.10.0007
26VGL1063 80.0075
90.0014
120.0291
130.6084
140.0427
150.0014
170.0014
180.2398
190.0603
200.0081
27VGL1165 140.0014
150.0007
160.0928
170.2317
180.0081
190.1328
200.0014
210.0359
260.0020
270.0996
280.3238
290.0156
300.0515
310.0027
28VGL1828 140.1247
150.0996
160.0318
170.0007
180.0014
190.3970
200.1192
210.0102
220.2127
230.0027
29VGL2009 90.0007
100.0041
110.0068
120.1551
130.2100
140.1843
150.3814
160.0569
170.0007
30VGL2409 130.0020
140.1730
150.0896
160.3609
170.3338
180.0231
190.0163
200.0014
31VGL2918 110.0007
120.2737
130.1159
140.0061
17.30.0176
18.30.0095
19.30.5217
20.30.0515
21.30.0020
22.30.0014
32VGL3008 130.0027
140.4199
150.0034
160.0007
170.0027
180.0346
190.2402
200.0556
210.0645
220.0522
230.0746
240.0448
250.0041
33VGL3235 110.0007
120.4213
130.0054
140.0645
150.4138
160.0373
170.0285
180.0285

Standard genetic assessment based on 33 autosomal STR loci

  NNaNeHoHeF
Golden RetrieverMean7398.3943.4220.6520.6870.052
 SE 0.4630.1780.0140.0130.006

Standard genetic assessment based on 7 STRs in the DLA region

  NNaNeHoHeF
Golden RetrieverMean7397.2862.9320.5960.6120.023
 SE 0.6610.3390.0560.0590.007

Standard genetic assessment for individual STR loci

#LocusNNaNeHoHeF
1AHT121739103.2490.6430.6920.071
2AHT137739127.5190.8390.8670.033
3AHTH13073993.2570.6540.6930.056
4AHTh171-A73992.3650.5410.5770.063
5AHTh260739102.6840.5370.6270.145
6AHTk21173962.1090.5220.5260.008
7AHTk25373953.0320.6500.6700.029
8C22.27973962.8580.5860.6500.099
9FH2001739104.6210.7400.7840.055
10FH205473994.3980.7560.7730.021
11FH284873972.6460.5530.6220.111
12INRA2173974.0650.7600.754-0.008
13INU00573962.8620.6360.6510.023
14INU03073932.3070.5370.5660.053
15INU05573953.1820.6630.6860.033
16LEI00473982.7670.6120.6390.042
17REN105L0373972.6530.5690.6230.087
18REN162C0473953.4480.6530.7100.080
19REN169D0173963.3260.6460.6990.076
20REN169O1873983.3150.7240.698-0.036
21REN247M2373962.8700.6110.6520.062
22REN54P1173983.1600.6360.6840.070
23REN64E1973973.8570.6870.7410.072
24VGL0760739114.5880.7530.7820.037
25VGL0910739153.3020.6530.6970.063
26VGL1063739102.3040.5510.5660.025
27VGL1165739145.0250.7570.8010.054
28VGL1828739104.1040.7200.7560.049
29VGL200973993.9850.7260.7490.030
30VGL240973983.5660.6890.7200.042
31VGL2918739102.7500.6300.6360.010
32VGL3008739133.9550.7030.7470.059
33VGL323573982.8090.5890.6440.086

Standard genetic assessment for 7 STRs in the DLA region

#LocusNNaNeHoHeF
1DLA I-3CCA739113.5100.6990.7150.022
2DLA I-4ACA73962.8050.6370.6430.010
3DLA I-4BCT73961.4270.3040.299-0.014
4DLA113173983.5130.6840.7150.043
55ACA73961.8340.4370.4550.040
65ACT73984.0700.7270.7540.036
75BCA73963.3650.6870.7030.023