Statistics and Breed-wide Allele Frequency - Golden Retriever

Updated Nov 22, 2024

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Golden Retriever (n=928)
1002	380 365 281 181	0.0005
1003	387 375 277 186	0.1460
1006	387 375 293 180	0.0151
1008	386 373 289 182	0.0016
1011	376 365 281 180	0.0005
1012	388 369 289 188	0.0011
1014	375 373 287 178	0.0442
1016	382 371 277 178	0.0043
1030	380 373 293 178	0.0011
1040	380 371 277 186	0.0005
1050	380 371 289 182	0.0005
1059	390 371 291 182	0.0005
1062	382 371 277 183	0.0862
1065	380 371 277 181	0.2705
1066	376 375 277 178	0.2780
1067	376 373 277 178	0.0442
1068	380 373 287 181	0.0496
1069	380 365 281 184	0.0377
1070	380 375 291 178	0.0129
1071	380 373 277 178	0.0005
1121	380 371 277 183	0.0005
1128	384 376 287 182	0.0005
1129	382 371 277 181	0.0005
1134	384 365 291 178	0.0005
1137	383 371 281 184	0.0011
1144	390 369 289 182	0.0005
1145	392 373 281 186	0.0005

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Golden Retriever (n=928)
2001	343 324 284	0.1466
2003	343 324 282	0.0221
2005	339 322 280	0.0135
2007	351 327 280	0.0151
2012	345 322 280	0.0005
2017	343 322 280	0.0377
2021	339 324 268	0.0862
2022	339 327 282	0.0005
2023	341 323 282	0.0011
2029	337 324 268	0.0005
2037	341 327 280	0.0135
2045	339 325 284	0.0383
2046	339 329 280	0.2527
2047	339 331 280	0.0102
2048	339 331 282	0.2705
2049	339 331 284	0.0011
2050	341 327 284	0.0307
2051	343 331 282	0.0113
2052	345 321 280	0.0022
2053	343 324 280	0.0286
2059	343 324 276	0.0005
2079	343 323 278	0.0005
2085	345 325 280	0.0011
2086	339 329 284	0.0140
2088	339 329 268	0.0011

Allele Frequencies

#	Locus Name	Allele	Golden Retriever (n=929)
1	AHT121	90	0.0005
		96	0.2976
		98	0.0468
		100	0.0032
		102	0.4505
		104	0.0135
		106	0.1604
		108	0.0151
		110	0.0118
		112	0.0005
2	AHT137	131	0.1514
		133	0.1369
		135	0.0005
		137	0.1509
		141	0.0005
		143	0.1008
		145	0.0242
		147	0.1008
		149	0.1816
		151	0.1110
		153	0.0404
		155	0.0011
3	AHTH130	111	0.0005
		117	0.0388
		119	0.0011
		121	0.3621
		123	0.0016
		125	0.2974
		127	0.0022
		129	0.2947
		131	0.0016
4	AHTh171-A	219	0.6105
		221	0.0005
		223	0.0269
		225	0.1827
		227	0.1460
		229	0.0005
		233	0.0016
		235	0.0011
		237	0.0302
5	AHTh260	236	0.0005
		238	0.0038
		240	0.0189
		242	0.1218
		244	0.5426
		246	0.2220
		248	0.0706
		250	0.0027
		252	0.0022
		254	0.0151
6	AHTk211	87	0.0016
		89	0.0787
		91	0.1110
		93	0.6643
		95	0.0334
		97	0.1110
7	AHTk253	284	0.0032
		286	0.3578
		288	0.2667
		290	0.0124
		292	0.3599
8	C22.279	110	0.0005
		116	0.2244
		118	0.5086
		120	0.0700
		124	0.0398
		126	0.1566
9	FH2001	124	0.0893
		132	0.1964
		136	0.0296
		140	0.0457
		144	0.3568
		148	0.1690
		152	0.0958
		156	0.0161
		158	0.0005
		160	0.0005
10	FH2054	148	0.1649
		152	0.0140
		156	0.3556
		160	0.0485
		164	0.0242
		168	0.2430
		172	0.1298
		176	0.0194
		180	0.0005
11	FH2848	232	0.0781
		234	0.0388
		236	0.0269
		238	0.4612
		240	0.3933
		242	0.0011
		244	0.0005
12	INRA21	91	0.2220
		95	0.0889
		97	0.0092
		99	0.0754
		101	0.2909
		103	0.3120
		105	0.0016
13	INU005	110	0.1249
		122	0.0005
		124	0.2330
		126	0.5161
		128	0.1211
		132	0.0043
14	INU030	144	0.4079
		150	0.5038
		152	0.0884
15	INU055	210	0.1518
		212	0.0005
		214	0.4408
		216	0.2853
		218	0.1216
16	LEI004	85	0.0818
		93	0.0005
		95	0.3132
		97	0.0963
		105	0.0016
		107	0.5032
		109	0.0022
		111	0.0011
17	REN105L03	227	0.0016
		231	0.0824
		233	0.5533
		235	0.2214
		237	0.0075
		239	0.0480
		241	0.0851
		243	0.0005
18	REN162C04	202	0.0846
		204	0.3955
		206	0.2963
		208	0.2231
		212	0.0005
19	REN169D01	202	0.3556
		210	0.0011
		212	0.1401
		216	0.3831
		218	0.0894
		220	0.0307
20	REN169O18	160	0.0005
		162	0.3082
		164	0.3976
		166	0.0011
		168	0.0900
		170	0.1918
		172	0.0102
		174	0.0005
21	REN247M23	264	0.0011
		268	0.3766
		270	0.0016
		272	0.3966
		276	0.0011
		278	0.2231
22	REN54P11	222	0.0485
		226	0.0474
		228	0.0183
		230	0.0005
		232	0.3017
		234	0.4504
		236	0.1083
		238	0.0248
23	REN64E19	139	0.0291
		143	0.0065
		145	0.2815
		147	0.3552
		149	0.1846
		153	0.1426
		155	0.0005
24	VGL0760	12	0.0016
		13	0.0022
		14	0.0011
		18.2	0.0075
		19.2	0.1625
		20.2	0.1685
		21.2	0.3358
		22.2	0.0867
		23.2	0.2078
		24.2	0.0226
		25.2	0.0038
25	VGL0910	14	0.0113
		15	0.0172
		15.1	0.0199
		16	0.0043
		16.1	0.0027
		17.1	0.0457
		18.1	0.4435
		19	0.0043
		19.1	0.3068
		20	0.0043
		20.1	0.0355
		21	0.0005
		21.1	0.0802
		22.1	0.0231
		23.1	0.0005
26	VGL1063	8	0.0059
		9	0.0011
		12	0.0312
		13	0.6130
		14	0.0414
		15	0.0032
		17	0.0011
		18	0.2293
		19	0.0657
		20	0.0081
27	VGL1165	14	0.0011
		15	0.0005
		16	0.0910
		17	0.2180
		18	0.0086
		19	0.1378
		20	0.0011
		21	0.0350
		26	0.0022
		27	0.1109
		28	0.3208
		29	0.0167
		30	0.0522
		31	0.0043
28	VGL1828	14	0.1200
		15	0.0985
		16	0.0318
		17	0.0005
		18	0.0011
		19	0.4074
		20	0.1184
		21	0.0124
		22	0.2067
		23	0.0032
29	VGL2009	9	0.0005
		10	0.0032
		11	0.0075
		12	0.1480
		13	0.2191
		14	0.1830
		15	0.3816
		16	0.0565
		17	0.0005
30	VGL2409	13	0.0016
		14	0.1703
		15	0.0884
		16	0.3540
		17	0.3411
		18	0.0232
		19	0.0189
		20	0.0027
31	VGL2918	11	0.0005
		12	0.2901
		13	0.1119
		14	0.0075
		15	0.0005
		17.3	0.0194
		18.3	0.0081
		19.3	0.5091
		20.3	0.0501
		21.3	0.0016
		22.3	0.0011
32	VGL3008	13	0.0022
		14	0.4138
		15	0.0027
		16	0.0005
		17	0.0032
		18	0.0356
		19	0.2452
		20	0.0533
		21	0.0727
		22	0.0560
		23	0.0695
		24	0.0420
		25	0.0032
33	VGL3235	11	0.0005
		12	0.4235
		13	0.0059
		14	0.0598
		15	0.4197
		16	0.0377
		17	0.0275
		18	0.0253

Standard genetic assessment based on 33 autosomal STR loci

Golden Retriever

		N	Na	Ne	Ho	He	F
	Mean	929	8.455	3.422	0.652	0.687	0.052
	SE		0.466	0.179	0.014	0.013	0.006

Standard genetic assessment based on 7 STRs in the DLA region

Golden Retriever

		N	Na	Ne	Ho	He	F
	Mean	929	7.286	2.947	0.601	0.614	0.019
	SE		0.661	0.340	0.057	0.059	0.005

Standard genetic assessment for individual STR loci

Golden Retriever

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	929	10	3.125	0.628	0.680	0.077
2	AHT137	929	12	7.563	0.836	0.868	0.036
3	AHTH130	929	9	3.248	0.643	0.692	0.070
4	AHTh171-A	929	9	2.331	0.527	0.571	0.077
5	AHTh260	929	10	2.747	0.544	0.636	0.144
6	AHTk211	929	6	2.113	0.523	0.527	0.008
7	AHTk253	929	5	3.041	0.650	0.671	0.032
8	C22.279	929	6	2.941	0.595	0.660	0.098
9	FH2001	929	10	4.654	0.748	0.785	0.047
10	FH2054	929	9	4.291	0.748	0.767	0.025
11	FH2848	929	7	2.661	0.560	0.624	0.102
12	INRA21	929	7	4.083	0.753	0.755	0.002
13	INU005	929	6	2.849	0.623	0.649	0.040
14	INU030	929	3	2.337	0.553	0.572	0.034
15	INU055	929	5	3.190	0.665	0.686	0.031
16	LEI004	929	8	2.722	0.605	0.633	0.044
17	REN105L03	929	8	2.691	0.574	0.628	0.086
18	REN162C04	929	5	3.321	0.633	0.699	0.095
19	REN169D01	929	6	3.314	0.655	0.698	0.062
20	REN169O18	929	8	3.355	0.708	0.702	-0.009
21	REN247M23	929	6	2.867	0.614	0.651	0.057
22	REN54P11	929	8	3.213	0.656	0.689	0.047
23	REN64E19	929	7	3.835	0.687	0.739	0.071
24	VGL0760	929	11	4.569	0.761	0.781	0.026
25	VGL0910	929	15	3.311	0.656	0.698	0.061
26	VGL1063	929	10	2.296	0.550	0.565	0.026
27	VGL1165	929	14	5.147	0.764	0.806	0.051
28	VGL1828	929	10	4.032	0.726	0.752	0.035
29	VGL2009	929	9	3.964	0.718	0.748	0.040
30	VGL2409	929	8	3.580	0.702	0.721	0.027
31	VGL2918	929	11	2.786	0.632	0.641	0.014
32	VGL3008	929	13	3.992	0.707	0.750	0.057
33	VGL3235	929	8	2.763	0.581	0.638	0.090

Standard genetic assessment for 7 STRs in the DLA region

Golden Retriever

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	929	11	3.563	0.708	0.719	0.015
2	DLA I-4ACA	929	6	2.789	0.637	0.641	0.007
3	DLA I-4BCT	929	6	1.425	0.298	0.298	0.001
4	DLA1131	929	8	3.537	0.689	0.717	0.040
5	5ACA	929	6	1.863	0.453	0.463	0.023
6	5ACT	929	8	4.059	0.730	0.754	0.032
7	5BCA	929	6	3.392	0.692	0.705	0.019

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Golden Retriever

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Golden Retriever

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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