Statistics and Breed-wide Allele Frequency - Golden Retriever

Updated Aug 9, 2020

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Golden Retriever (n=737)
1002	380 365 281 181	0.0007
1003	387 375 277 186	0.1391
1006	387 375 293 180	0.0136
1008	386 373 289 182	0.0014
1011	376 365 281 180	0.0007
1012	388 369 289 188	0.0014
1014	375 373 287 178	0.0400
1016	382 371 277 178	0.0020
1030	380 373 293 178	0.0007
1040	380 371 277 186	0.0007
1050	380 371 289 182	0.0007
1059	390 371 291 182	0.0007
1062	382 371 277 183	0.0889
1065	380 371 277 181	0.2632
1066	376 375 277 178	0.2863
1067	376 373 277 178	0.0488
1068	380 373 287 181	0.0516
1069	380 365 281 184	0.0387
1070	380 375 291 178	0.0149
1071	380 373 277 178	0.0007
1121	380 371 277 183	0.0007
1128	384 376 287 182	0.0007
1129	382 371 277 181	0.0007
1134	384 365 291 178	0.0007
1137	383 371 281 184	0.0014
1144	390 369 289 182	0.0007
1145	392 373 281 186	0.0007

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Golden Retriever (n=737)
2001	343 324 284	0.1398
2003	343 324 282	0.0224
2005	339 322 280	0.0156
2007	351 327 280	0.0136
2012	345 322 280	0.0007
2017	343 322 280	0.0407
2021	339 324 268	0.0889
2022	339 327 282	0.0007
2023	341 323 282	0.0007
2029	337 324 268	0.0007
2045	339 325 284	0.0393
2046	339 329 280	0.2748
2047	339 331 280	0.0109
2048	339 331 282	0.2605
2049	339 331 284	0.0014
2050	341 327 284	0.0400
2051	343 331 282	0.0115
2052	345 321 280	0.0020
2053	343 324 280	0.0305
2059	343 324 276	0.0007
2079	343 323 278	0.0007
2085	345 325 280	0.0014
2086	339 329 284	0.0014
2088	339 329 268	0.0014

Allele Frequencies

#	Locus Name	Allele	Golden Retriever (n=739)
1	AHT121	90	0.0007
		96	0.2882
		98	0.0514
		100	0.0034
		102	0.4364
		104	0.0156
		106	0.1759
		108	0.0142
		110	0.0135
		112	0.0007
2	AHT137	131	0.1606
		133	0.1253
		135	0.0007
		137	0.1511
		141	0.0007
		143	0.0969
		145	0.0237
		147	0.0976
		149	0.1856
		151	0.1131
		153	0.0440
		155	0.0007
3	AHTH130	111	0.0007
		117	0.0366
		119	0.0014
		121	0.3482
		123	0.0014
		125	0.3117
		127	0.0027
		129	0.2954
		131	0.0020
4	AHTh171-A	219	0.6016
		221	0.0007
		223	0.0257
		225	0.1965
		227	0.1443
		229	0.0007
		233	0.0020
		235	0.0014
		237	0.0271
5	AHTh260	236	0.0007
		238	0.0047
		240	0.0190
		242	0.1206
		244	0.5596
		246	0.1944
		248	0.0806
		250	0.0034
		252	0.0027
		254	0.0142
6	AHTk211	87	0.0020
		89	0.0806
		91	0.1131
		93	0.6653
		95	0.0332
		97	0.1057
7	AHTk253	284	0.0034
		286	0.3598
		288	0.2778
		290	0.0081
		292	0.3509
8	C22.279	110	0.0007
		116	0.2246
		118	0.5230
		120	0.0683
		124	0.0447
		126	0.1387
9	FH2001	124	0.0907
		132	0.2009
		136	0.0325
		140	0.0447
		144	0.3593
		148	0.1658
		152	0.0893
		156	0.0156
		158	0.0007
		160	0.0007
10	FH2054	148	0.1660
		152	0.0149
		156	0.3415
		160	0.0495
		164	0.0217
		168	0.2453
		172	0.1396
		176	0.0210
		180	0.0007
11	FH2848	232	0.0711
		234	0.0420
		236	0.0257
		238	0.4512
		240	0.4085
		242	0.0007
		244	0.0007
12	INRA21	91	0.2209
		95	0.0962
		97	0.0095
		99	0.0671
		101	0.2825
		103	0.3218
		105	0.0020
13	INU005	110	0.1198
		122	0.0007
		124	0.2260
		126	0.5162
		128	0.1319
		132	0.0054
14	INU030	144	0.3991
		150	0.5169
		152	0.0840
15	INU055	210	0.1516
		212	0.0007
		214	0.4465
		216	0.2760
		218	0.1252
16	LEI004	85	0.0792
		93	0.0007
		95	0.3173
		97	0.1055
		105	0.0014
		107	0.4932
		109	0.0014
		111	0.0014
17	REN105L03	227	0.0020
		231	0.0799
		233	0.5630
		235	0.2066
		237	0.0081
		239	0.0488
		241	0.0915
18	REN162C04	202	0.0949
		204	0.3713
		206	0.2893
		208	0.2439
		212	0.0007
19	REN169D01	202	0.3449
		210	0.0014
		212	0.1430
		216	0.3902
		218	0.0901
		220	0.0305
20	REN169O18	160	0.0007
		162	0.2988
		164	0.4106
		166	0.0014
		168	0.0921
		170	0.1877
		172	0.0081
		174	0.0007
21	REN247M23	264	0.0014
		268	0.3808
		270	0.0020
		272	0.3930
		276	0.0014
		278	0.2215
22	REN54P11	222	0.0467
		226	0.0474
		228	0.0196
		230	0.0007
		232	0.3001
		234	0.4587
		236	0.1030
		238	0.0237
23	REN64E19	139	0.0345
		143	0.0068
		145	0.2957
		147	0.3451
		149	0.1834
		153	0.1340
		155	0.0007
24	VGL0760	12	0.0020
		13	0.0020
		14	0.0014
		18.2	0.0047
		19.2	0.1633
		20.2	0.1626
		21.2	0.3313
		22.2	0.0901
		23.2	0.2154
		24.2	0.0230
		25.2	0.0041
25	VGL0910	14	0.0115
		15	0.0122
		15.1	0.0237
		16	0.0047
		16.1	0.0034
		17.1	0.0440
		18.1	0.4478
		19	0.0047
		19.1	0.3028
		20	0.0047
		20.1	0.0373
		21	0.0007
		21.1	0.0752
		22.1	0.0264
		23.1	0.0007
26	VGL1063	8	0.0075
		9	0.0014
		12	0.0291
		13	0.6084
		14	0.0427
		15	0.0014
		17	0.0014
		18	0.2398
		19	0.0603
		20	0.0081
27	VGL1165	14	0.0014
		15	0.0007
		16	0.0928
		17	0.2317
		18	0.0081
		19	0.1328
		20	0.0014
		21	0.0359
		26	0.0020
		27	0.0996
		28	0.3238
		29	0.0156
		30	0.0515
		31	0.0027
28	VGL1828	14	0.1247
		15	0.0996
		16	0.0318
		17	0.0007
		18	0.0014
		19	0.3970
		20	0.1192
		21	0.0102
		22	0.2127
		23	0.0027
29	VGL2009	9	0.0007
		10	0.0041
		11	0.0068
		12	0.1551
		13	0.2100
		14	0.1843
		15	0.3814
		16	0.0569
		17	0.0007
30	VGL2409	13	0.0020
		14	0.1730
		15	0.0896
		16	0.3609
		17	0.3338
		18	0.0231
		19	0.0163
		20	0.0014
31	VGL2918	11	0.0007
		12	0.2737
		13	0.1159
		14	0.0061
		17.3	0.0176
		18.3	0.0095
		19.3	0.5217
		20.3	0.0515
		21.3	0.0020
		22.3	0.0014
32	VGL3008	13	0.0027
		14	0.4199
		15	0.0034
		16	0.0007
		17	0.0027
		18	0.0346
		19	0.2402
		20	0.0556
		21	0.0645
		22	0.0522
		23	0.0746
		24	0.0448
		25	0.0041
33	VGL3235	11	0.0007
		12	0.4213
		13	0.0054
		14	0.0645
		15	0.4138
		16	0.0373
		17	0.0285
		18	0.0285

Standard genetic assessment based on 33 autosomal STR loci

		N	Na	Ne	Ho	He	F
Golden Retriever	Mean	739	8.394	3.422	0.652	0.687	0.052
	SE		0.463	0.178	0.014	0.013	0.006

Standard genetic assessment based on 7 STRs in the DLA region

		N	Na	Ne	Ho	He	F
Golden Retriever	Mean	739	7.286	2.932	0.596	0.612	0.023
	SE		0.661	0.339	0.056	0.059	0.007

Standard genetic assessment for individual STR loci

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	739	10	3.249	0.643	0.692	0.071
2	AHT137	739	12	7.519	0.839	0.867	0.033
3	AHTH130	739	9	3.257	0.654	0.693	0.056
4	AHTh171-A	739	9	2.365	0.541	0.577	0.063
5	AHTh260	739	10	2.684	0.537	0.627	0.145
6	AHTk211	739	6	2.109	0.522	0.526	0.008
7	AHTk253	739	5	3.032	0.650	0.670	0.029
8	C22.279	739	6	2.858	0.586	0.650	0.099
9	FH2001	739	10	4.621	0.740	0.784	0.055
10	FH2054	739	9	4.398	0.756	0.773	0.021
11	FH2848	739	7	2.646	0.553	0.622	0.111
12	INRA21	739	7	4.065	0.760	0.754	-0.008
13	INU005	739	6	2.862	0.636	0.651	0.023
14	INU030	739	3	2.307	0.537	0.566	0.053
15	INU055	739	5	3.182	0.663	0.686	0.033
16	LEI004	739	8	2.767	0.612	0.639	0.042
17	REN105L03	739	7	2.653	0.569	0.623	0.087
18	REN162C04	739	5	3.448	0.653	0.710	0.080
19	REN169D01	739	6	3.326	0.646	0.699	0.076
20	REN169O18	739	8	3.315	0.724	0.698	-0.036
21	REN247M23	739	6	2.870	0.611	0.652	0.062
22	REN54P11	739	8	3.160	0.636	0.684	0.070
23	REN64E19	739	7	3.857	0.687	0.741	0.072
24	VGL0760	739	11	4.588	0.753	0.782	0.037
25	VGL0910	739	15	3.302	0.653	0.697	0.063
26	VGL1063	739	10	2.304	0.551	0.566	0.025
27	VGL1165	739	14	5.025	0.757	0.801	0.054
28	VGL1828	739	10	4.104	0.720	0.756	0.049
29	VGL2009	739	9	3.985	0.726	0.749	0.030
30	VGL2409	739	8	3.566	0.689	0.720	0.042
31	VGL2918	739	10	2.750	0.630	0.636	0.010
32	VGL3008	739	13	3.955	0.703	0.747	0.059
33	VGL3235	739	8	2.809	0.589	0.644	0.086

Standard genetic assessment for 7 STRs in the DLA region

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	739	11	3.510	0.699	0.715	0.022
2	DLA I-4ACA	739	6	2.805	0.637	0.643	0.010
3	DLA I-4BCT	739	6	1.427	0.304	0.299	-0.014
4	DLA1131	739	8	3.513	0.684	0.715	0.043
5	5ACA	739	6	1.834	0.437	0.455	0.040
6	5ACT	739	8	4.070	0.727	0.754	0.036
7	5BCA	739	6	3.365	0.687	0.703	0.023

Veterinary Genetics Laboratory

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Statistics and Breed-wide Allele Frequency - Golden Retriever

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Golden Retriever

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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