Statistics and Breed-wide Allele Frequency - Golden Retriever

Updated Dec 24, 2024

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Golden Retriever (n=940)
1002	380 365 281 181	0.0005
1003	387 375 277 186	0.1484
1006	387 375 293 180	0.0149
1008	386 373 289 182	0.0016
1011	376 365 281 180	0.0005
1012	388 369 289 188	0.0011
1014	375 373 287 178	0.0452
1016	382 371 277 178	0.0043
1030	380 373 293 178	0.0011
1040	380 371 277 186	0.0005
1050	380 371 289 182	0.0005
1059	390 371 291 182	0.0005
1062	382 371 277 183	0.0862
1065	380 371 277 181	0.2707
1066	376 375 277 178	0.2766
1067	376 373 277 178	0.0436
1068	380 373 287 181	0.0489
1069	380 365 281 184	0.0372
1070	380 375 291 178	0.0128
1071	380 373 277 178	0.0005
1121	380 371 277 183	0.0005
1128	384 376 287 182	0.0005
1129	382 371 277 181	0.0005
1134	384 365 291 178	0.0005
1137	383 371 281 184	0.0011
1144	390 369 289 182	0.0005
1145	392 373 281 186	0.0005

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Golden Retriever (n=940)
2001	343 324 284	0.1489
2003	343 324 282	0.0218
2005	339 322 280	0.0133
2007	351 327 280	0.0149
2012	345 322 280	0.0005
2017	343 322 280	0.0372
2021	339 324 268	0.0862
2022	339 327 282	0.0005
2023	341 323 282	0.0011
2029	337 324 268	0.0005
2037	341 327 280	0.0133
2045	339 325 284	0.0378
2046	339 329 280	0.2511
2047	339 331 280	0.0101
2048	339 331 282	0.2713
2049	339 331 284	0.0011
2050	341 327 284	0.0319
2051	343 331 282	0.0112
2052	345 321 280	0.0021
2053	343 324 280	0.0282
2059	343 324 276	0.0005
2079	343 323 278	0.0005
2085	345 325 280	0.0011
2086	339 329 284	0.0138
2088	339 329 268	0.0011

Allele Frequencies

#	Locus Name	Allele	Golden Retriever (n=941)
1	AHT121	90	0.0005
		96	0.2981
		98	0.0462
		100	0.0032
		102	0.4506
		104	0.0133
		106	0.1610
		108	0.0149
		110	0.0117
		112	0.0005
2	AHT137	131	0.1495
		133	0.1378
		135	0.0005
		137	0.1511
		141	0.0005
		143	0.1000
		145	0.0245
		147	0.1005
		149	0.1819
		151	0.1117
		153	0.0410
		155	0.0011
3	AHTH130	111	0.0005
		117	0.0394
		119	0.0011
		121	0.3617
		123	0.0016
		125	0.2973
		127	0.0021
		129	0.2947
		131	0.0016
4	AHTh171-A	219	0.6101
		221	0.0005
		223	0.0271
		225	0.1824
		227	0.1457
		229	0.0005
		233	0.0016
		235	0.0011
		237	0.0309
5	AHTh260	236	0.0005
		238	0.0037
		240	0.0191
		242	0.1213
		244	0.5426
		246	0.2223
		248	0.0707
		250	0.0027
		252	0.0021
		254	0.0149
6	AHTk211	87	0.0016
		89	0.0777
		91	0.1117
		93	0.6644
		95	0.0330
		97	0.1117
7	AHTk253	284	0.0032
		286	0.3569
		288	0.2654
		290	0.0122
		292	0.3622
8	C22.279	110	0.0005
		116	0.2237
		118	0.5112
		120	0.0696
		124	0.0393
		126	0.1557
9	FH2001	124	0.0893
		132	0.1987
		136	0.0292
		140	0.0452
		144	0.3560
		148	0.1684
		152	0.0962
		156	0.0159
		158	0.0005
		160	0.0005
10	FH2054	148	0.1654
		152	0.0144
		156	0.3553
		160	0.0484
		164	0.0239
		168	0.2420
		172	0.1309
		176	0.0191
		180	0.0005
11	FH2848	232	0.0771
		234	0.0383
		236	0.0277
		238	0.4606
		240	0.3947
		242	0.0011
		244	0.0005
12	INRA21	91	0.2223
		95	0.0878
		97	0.0090
		99	0.0755
		101	0.2920
		103	0.3117
		105	0.0016
13	INU005	110	0.1243
		122	0.0005
		124	0.2322
		126	0.5181
		128	0.1206
		132	0.0043
14	INU030	144	0.4053
		150	0.5048
		152	0.0899
15	INU055	210	0.1509
		212	0.0005
		214	0.4421
		216	0.2843
		218	0.1222
16	LEI004	85	0.0818
		93	0.0005
		95	0.3151
		97	0.0962
		105	0.0016
		107	0.5016
		109	0.0021
		111	0.0011
17	REN105L03	227	0.0016
		231	0.0830
		233	0.5543
		235	0.2202
		237	0.0080
		239	0.0473
		241	0.0851
		243	0.0005
18	REN162C04	202	0.0872
		204	0.3947
		206	0.2957
		208	0.2218
		212	0.0005
19	REN169D01	202	0.3548
		210	0.0011
		212	0.1394
		216	0.3856
		218	0.0888
		220	0.0303
20	REN169O18	160	0.0005
		162	0.3074
		164	0.3963
		166	0.0011
		168	0.0904
		170	0.1936
		172	0.0101
		174	0.0005
21	REN247M23	264	0.0011
		268	0.3777
		270	0.0016
		272	0.3947
		276	0.0011
		278	0.2239
22	REN54P11	222	0.0484
		226	0.0479
		228	0.0181
		230	0.0005
		232	0.3037
		234	0.4495
		236	0.1069
		238	0.0250
23	REN64E19	139	0.0287
		143	0.0064
		145	0.2827
		147	0.3533
		149	0.1854
		153	0.1429
		155	0.0005
24	VGL0760	12	0.0016
		13	0.0021
		14	0.0011
		18.2	0.0074
		19.2	0.1615
		20.2	0.1684
		21.2	0.3353
		22.2	0.0877
		23.2	0.2088
		24.2	0.0223
		25.2	0.0037
25	VGL0910	14	0.0122
		15	0.0170
		15.1	0.0197
		16	0.0043
		16.1	0.0027
		17.1	0.0457
		18.1	0.4463
		19	0.0043
		19.1	0.3045
		20	0.0043
		20.1	0.0351
		21	0.0005
		21.1	0.0797
		22.1	0.0234
		23.1	0.0005
26	VGL1063	8	0.0058
		9	0.0011
		12	0.0313
		13	0.6137
		14	0.0420
		15	0.0032
		17	0.0011
		18	0.2279
		19	0.0659
		20	0.0080
27	VGL1165	14	0.0011
		15	0.0005
		16	0.0914
		17	0.2184
		18	0.0085
		19	0.1366
		20	0.0011
		21	0.0345
		26	0.0021
		27	0.1111
		28	0.3209
		29	0.0165
		30	0.0531
		31	0.0043
28	VGL1828	14	0.1190
		15	0.0978
		16	0.0324
		17	0.0005
		18	0.0011
		19	0.4081
		20	0.1185
		21	0.0122
		22	0.2072
		23	0.0032
29	VGL2009	9	0.0005
		10	0.0032
		11	0.0074
		12	0.1488
		13	0.2168
		14	0.1844
		15	0.3820
		16	0.0563
		17	0.0005
30	VGL2409	13	0.0016
		14	0.1702
		15	0.0878
		16	0.3548
		17	0.3404
		18	0.0239
		19	0.0186
		20	0.0027
31	VGL2918	11	0.0011
		12	0.2906
		13	0.1116
		14	0.0074
		15	0.0005
		17.3	0.0191
		18.3	0.0080
		19.3	0.5074
		20.3	0.0515
		21.3	0.0016
		22.3	0.0011
32	VGL3008	13	0.0021
		14	0.4138
		15	0.0027
		16	0.0005
		17	0.0037
		18	0.0362
		19	0.2452
		20	0.0532
		21	0.0723
		22	0.0559
		23	0.0691
		24	0.0420
		25	0.0032
33	VGL3235	11	0.0005
		12	0.4234
		13	0.0059
		14	0.0596
		15	0.4207
		16	0.0372
		17	0.0271
		18	0.0255

Standard genetic assessment based on 33 autosomal STR loci

Golden Retriever

		N	Na	Ne	Ho	He	F
	Mean	941	8.455	3.421	0.652	0.687	0.051
	SE		0.466	0.179	0.014	0.013	0.006

Standard genetic assessment based on 7 STRs in the DLA region

Golden Retriever

		N	Na	Ne	Ho	He	F
	Mean	941	7.286	2.951	0.602	0.614	0.019
	SE		0.661	0.341	0.057	0.059	0.005

Standard genetic assessment for individual STR loci

Golden Retriever

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	941	10	3.120	0.625	0.680	0.080
2	AHT137	941	12	7.570	0.837	0.868	0.035
3	AHTH130	941	9	3.251	0.641	0.692	0.073
4	AHTh171-A	941	9	2.334	0.529	0.572	0.075
5	AHTh260	941	10	2.746	0.543	0.636	0.147
6	AHTk211	941	6	2.112	0.521	0.527	0.010
7	AHTk253	941	5	3.038	0.651	0.671	0.029
8	C22.279	941	6	2.924	0.593	0.658	0.099
9	FH2001	941	10	4.652	0.748	0.785	0.047
10	FH2054	941	9	4.295	0.748	0.767	0.025
11	FH2848	941	7	2.659	0.561	0.624	0.101
12	INRA21	941	7	4.076	0.753	0.755	0.002
13	INU005	941	6	2.838	0.620	0.648	0.043
14	INU030	941	3	2.341	0.555	0.573	0.031
15	INU055	941	5	3.185	0.662	0.686	0.035
16	LEI004	941	8	2.726	0.605	0.633	0.045
17	REN105L03	941	8	2.687	0.576	0.628	0.083
18	REN162C04	941	5	3.333	0.634	0.700	0.094
19	REN169D01	941	6	3.302	0.652	0.697	0.065
20	REN169O18	941	8	3.363	0.710	0.703	-0.010
21	REN247M23	941	6	2.869	0.615	0.651	0.056
22	REN54P11	941	8	3.212	0.656	0.689	0.047
23	REN64E19	941	7	3.840	0.688	0.740	0.070
24	VGL0760	941	11	4.572	0.763	0.781	0.023
25	VGL0910	941	15	3.300	0.652	0.697	0.064
26	VGL1063	941	10	2.295	0.549	0.564	0.026
27	VGL1165	941	14	5.144	0.764	0.806	0.052
28	VGL1828	941	10	4.025	0.727	0.752	0.033
29	VGL2009	941	9	3.963	0.719	0.748	0.038
30	VGL2409	941	8	3.580	0.703	0.721	0.024
31	VGL2918	941	11	2.797	0.635	0.642	0.011
32	VGL3008	941	13	3.993	0.710	0.750	0.053
33	VGL3235	941	8	2.757	0.581	0.637	0.089

Standard genetic assessment for 7 STRs in the DLA region

Golden Retriever

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	941	11	3.579	0.710	0.721	0.015
2	DLA I-4ACA	941	6	2.785	0.638	0.641	0.005
3	DLA I-4BCT	941	6	1.423	0.298	0.297	-0.000
4	DLA1131	941	8	3.544	0.690	0.718	0.039
5	5ACA	941	6	1.869	0.454	0.465	0.023
6	5ACT	941	8	4.055	0.730	0.753	0.031
7	5BCA	941	6	3.401	0.694	0.706	0.018

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Golden Retriever

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Golden Retriever

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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