Statistics and Breed-wide Allele Frequency - Golden Retriever

Updated Sep 28, 2020

DLA Class I Haplotype Frequencies

DLA1 #STR typesGolden Retriever (n=738)
1002380 365 281 1810.0007
1003387 375 277 1860.1396
1006387 375 293 1800.0136
1008386 373 289 1820.0014
1011376 365 281 1800.0007
1012388 369 289 1880.0014
1014375 373 287 1780.0400
1016382 371 277 1780.0020
1030380 373 293 1780.0007
1040380 371 277 1860.0007
1050380 371 289 1820.0007
1059390 371 291 1820.0007
1062382 371 277 1830.0888
1065380 371 277 1810.2629
1066376 375 277 1780.2866
1067376 373 277 1780.0488
1068380 373 287 1810.0515
1069380 365 281 1840.0386
1070380 375 291 1780.0149
1071380 373 277 1780.0007
1121380 371 277 1830.0007
1128384 376 287 1820.0007
1129382 371 277 1810.0007
1134384 365 291 1780.0007
1137383 371 281 1840.0014
1144390 369 289 1820.0007
1145392 373 281 1860.0007

DLA Class II Haplotype Frequencies

DLA2 #STR typesGolden Retriever (n=738)
2001343 324 2840.1402
2003343 324 2820.0224
2005339 322 2800.0156
2007351 327 2800.0136
2012345 322 2800.0007
2017343 322 2800.0407
2021339 324 2680.0888
2022339 327 2820.0007
2023341 323 2820.0007
2029337 324 2680.0007
2045339 325 2840.0393
2046339 329 2800.2751
2047339 331 2800.0108
2048339 331 2820.2602
2049339 331 2840.0014
2050341 327 2840.0400
2051343 331 2820.0115
2052345 321 2800.0020
2053343 324 2800.0305
2059343 324 2760.0007
2079343 323 2780.0007
2085345 325 2800.0014
2086339 329 2840.0014
2088339 329 2680.0014

Allele Frequencies

#Locus NameAlleleGolden Retriever (n=740)
1AHT121 900.0007
960.2878
980.0514
1000.0041
1020.4365
1040.0155
1060.1757
1080.0142
1100.0135
1120.0007
2AHT137 1310.1604
1330.1258
1350.0007
1370.1509
1410.0007
1430.0968
1450.0237
1470.0974
1490.1861
1510.1130
1530.0440
1550.0007
3AHTH130 1110.0007
1170.0365
1190.0014
1210.3478
1230.0014
1250.3126
1270.0027
1290.2950
1310.0020
4AHTh171-A 2190.6022
2210.0007
2230.0257
2250.1962
2270.1441
2290.0007
2330.0020
2350.0014
2370.0271
5AHTh260 2360.0007
2380.0047
2400.0189
2420.1204
2440.5595
2460.1949
2480.0805
2500.0034
2520.0027
2540.0142
6AHTk211 870.0020
890.0805
910.1130
930.6658
950.0332
970.1055
7AHTk253 2840.0034
2860.3593
2880.2788
2900.0081
2920.3505
8C22.279 1100.0007
1160.2243
1180.5230
1200.0682
1240.0446
1260.1392
9FH2001 1240.0905
1320.2007
1360.0324
1400.0446
1440.3601
1480.1655
1520.0892
1560.0155
1580.0007
1600.0007
10FH2054 1480.1658
1520.0149
1560.3424
1600.0494
1640.0217
1680.2449
1720.1394
1760.0210
1800.0007
11FH2848 2320.0710
2340.0419
2360.0257
2380.4520
2400.4080
2420.0007
2440.0007
12INRA21 910.2212
950.0961
970.0095
990.0670
1010.2821
1030.3221
1050.0020
13INU005 1100.1196
1220.0007
1240.2257
1260.5169
1280.1318
1320.0054
14INU030 1440.3985
1500.5176
1520.0839
15INU055 2100.1520
2120.0007
2140.4459
2160.2764
2180.1250
16LEI004 850.0791
930.0007
950.3176
970.1054
1050.0014
1070.4932
1090.0014
1110.0014
17REN105L03 2270.0020
2310.0798
2330.5636
2350.2064
2370.0081
2390.0487
2410.0913
18REN162C04 2020.0947
2040.3721
2060.2889
2080.2436
2120.0007
19REN169D01 2020.3451
2100.0014
2120.1428
2160.3897
2180.0907
2200.0304
20REN169O18 1600.0007
1620.2984
1640.4114
1660.0014
1680.0920
1700.1874
1720.0081
1740.0007
21REN247M23 2640.0014
2680.3802
2700.0020
2720.3931
2760.0014
2780.2219
22REN54P11 2220.0467
2260.0474
2280.0196
2300.0007
2320.2997
2340.4581
2360.1042
2380.0237
23REN64E19 1390.0345
1430.0068
1450.2959
1470.3446
1490.1831
1530.1345
1550.0007
24VGL0760 120.0020
130.0020
140.0014
18.20.0047
19.20.1637
20.20.1631
21.20.3309
22.20.0900
23.20.2152
24.20.0230
25.20.0041
25VGL0910 140.0115
150.0122
15.10.0237
160.0047
16.10.0034
17.10.0440
18.10.4479
190.0047
19.10.3031
200.0047
20.10.0372
210.0007
21.10.0751
22.10.0264
23.10.0007
26VGL1063 80.0074
90.0014
120.0291
130.6089
140.0426
150.0014
170.0014
180.2395
190.0602
200.0081
27VGL1165 140.0014
150.0007
160.0934
170.2321
180.0081
190.1326
200.0014
210.0359
260.0020
270.0995
280.3234
290.0156
300.0514
310.0027
28VGL1828 140.1245
150.0995
160.0318
170.0007
180.0014
190.3978
200.1191
210.0101
220.2124
230.0027
29VGL2009 90.0007
100.0041
110.0074
120.1549
130.2097
140.1840
150.3816
160.0568
170.0007
30VGL2409 130.0020
140.1734
150.0894
160.3604
170.3340
180.0230
190.0163
200.0014
31VGL2918 110.0007
120.2733
130.1157
140.0061
17.30.0176
18.30.0095
19.30.5223
20.30.0514
21.30.0020
22.30.0014
32VGL3008 130.0027
140.4201
150.0034
160.0007
170.0027
180.0346
190.2405
200.0556
210.0644
220.0522
230.0745
240.0447
250.0041
33VGL3235 110.0007
120.4214
130.0054
140.0644
150.4140
160.0373
170.0285
180.0285

Standard genetic assessment based on 33 autosomal STR loci

  NNaNeHoHeF
Golden RetrieverMean7408.3943.4210.6520.6870.052
 SE 0.4630.1780.0140.0130.006

Standard genetic assessment based on 7 STRs in the DLA region

  NNaNeHoHeF
Golden RetrieverMean7407.2862.9320.5970.6120.023
 SE 0.6610.3390.0570.0590.007

Standard genetic assessment for individual STR loci

#LocusNNaNeHoHeF
1AHT121740103.2520.6430.6920.071
2AHT137740127.5160.8390.8670.032
3AHTH13074093.2570.6540.6930.057
4AHTh171-A74092.3630.5400.5770.064
5AHTh260740102.6840.5370.6270.144
6AHTk21174062.1060.5210.5250.008
7AHTk25374053.0330.6500.6700.031
8C22.27974062.8580.5860.6500.098
9FH2001740104.6120.7390.7830.056
10FH205474094.3920.7550.7720.022
11FH284874072.6440.5520.6220.112
12INRA2174074.0640.7600.754-0.009
13INU00574062.8590.6350.6500.023
14INU03074032.3050.5360.5660.054
15INU05574053.1850.6640.6860.033
16LEI00474082.7660.6120.6380.041
17REN105L0374072.6500.5680.6230.087
18REN162C0474053.4450.6520.7100.081
19REN169D0174063.3280.6470.7000.075
20REN169O1874083.3120.7230.698-0.035
21REN247M2374062.8710.6120.6520.061
22REN54P1174083.1660.6350.6840.072
23REN64E1974073.8580.6880.7410.072
24VGL0760740114.5910.7540.7820.036
25VGL0910740153.3000.6540.6970.062
26VGL1063740102.3010.5510.5650.026
27VGL1165740145.0280.7580.8010.054
28VGL1828740104.0970.7190.7560.049
29VGL200974093.9870.7270.7490.030
30VGL240974083.5670.6900.7200.042
31VGL2918740102.7470.6290.6360.011
32VGL3008740133.9520.7030.7470.059
33VGL323574082.8080.5890.6440.085

Standard genetic assessment for 7 STRs in the DLA region

#LocusNNaNeHoHeF
1DLA I-3CCA740113.5110.7000.7150.022
2DLA I-4ACA74062.8020.6360.6430.011
3DLA I-4BCT74061.4260.3030.299-0.014
4DLA113174083.5130.6850.7150.043
55ACA74061.8350.4380.4550.038
65ACT74084.0690.7280.7540.035
75BCA74063.3650.6870.7030.023