Statistics and Breed-wide Allele Frequency - Irish Red and White Setter

Updated Jun 13, 2021

DLA Class I Haplotype Frequencies

DLA1 #STR typesIrish Red and White Setter (n=71)
1006387 375 293 1800.070
1008386 373 289 1820.606
1011376 365 281 1800.028
1014375 373 287 1780.035
1069380 365 281 1840.028
1175380 375 293 1800.085
1201382 381 277 1810.085
1202390 373 289 1830.063

DLA Class II Haplotype Frequencies

DLA2 #STR typesIrish Red and White Setter (n=71)
2005339 322 2800.099
2007351 327 2800.155
2012345 322 2800.197
2035341 323 2800.085
2045339 325 2840.028
2052345 321 2800.437

Allele Frequencies

#Locus NameAlleleIrish Red and White Setter (n=71)
1AHT121 980.225
1000.225
1020.148
1040.127
1060.155
1080.021
1100.077
1120.021
2AHT137 1310.014
1370.077
1430.324
1450.092
1470.352
1490.134
1510.007
3AHTH130 1170.430
1210.028
1270.331
1290.056
1310.155
4AHTh171-A 2190.056
2250.232
2330.254
2350.056
2370.183
2410.218
5AHTh260 2400.373
2460.127
2520.197
2540.289
2560.014
6AHTk211 870.028
890.444
910.169
930.162
950.197
7AHTk253 2860.204
2880.021
2920.775
8C22.279 1160.711
1180.007
1200.120
1240.134
1260.007
1300.021
9FH2001 1320.261
1360.289
1440.014
1480.183
1520.239
1560.014
10FH2054 1480.035
1520.063
1560.021
1640.127
1680.613
1720.049
1760.085
1800.007
11FH2848 2300.014
2340.232
2360.120
2380.345
2400.007
2420.268
2460.014
12INRA21 950.563
970.085
990.021
1010.310
1030.021
13INU005 1100.042
1240.282
1260.430
1280.246
14INU030 1440.261
1460.261
1480.014
1500.458
1540.007
15INU055 2080.007
2100.331
2120.035
2140.542
2160.007
2180.077
16LEI004 850.268
950.606
970.127
17REN105L03 2310.021
2330.056
2350.472
2390.077
2410.366
2450.007
18REN162C04 2020.690
2060.085
2080.225
19REN169D01 2120.718
2160.261
2180.021
20REN169O18 1620.521
1640.345
1680.120
1700.007
1720.007
21REN247M23 2680.225
2700.014
2720.366
2760.120
2780.275
22REN54P11 2220.268
2260.021
2320.254
2340.148
2380.310
23REN64E19 1450.894
1470.007
1490.035
1530.063
24VGL0760 120.007
130.049
140.430
18.20.049
22.20.070
23.20.007
24.20.141
25.20.246
25VGL0910 140.141
150.338
15.10.056
160.007
18.10.014
19.10.197
20.10.035
21.10.113
22.10.099
26VGL1063 80.021
90.408
130.134
140.077
150.275
170.049
180.028
200.007
27VGL1165 140.021
150.338
160.077
180.007
190.092
210.035
220.148
270.007
280.063
290.007
300.190
310.014
28VGL1828 170.007
190.303
200.246
210.007
220.437
29VGL2009 130.239
140.754
150.007
30VGL2409 150.324
160.380
180.176
190.120
31VGL2918 120.232
130.021
140.070
150.472
17.30.162
23.30.042
32VGL3008 150.148
160.077
170.563
180.155
190.007
200.028
210.021
33VGL3235 120.035
130.021
140.542
150.387
180.014

Standard genetic assessment based on 33 autosomal STR loci

Irish Red and White Setter

  NNaNeHoHeF
Mean715.6673.1120.6220.6320.016
 SE 0.3420.1910.0250.0250.015

Standard genetic assessment based on 7 STRs in the DLA region

Irish Red and White Setter

  NNaNeHoHeF
Mean714.7142.2000.4810.4960.030
 SE 0.5610.2310.0760.0720.028

Standard genetic assessment for individual STR loci

Irish Red and White Setter

#LocusNNaNeHoHeF
1AHT1217185.8680.8310.830-0.002
2AHT1377173.8250.7460.739-0.011
3AHTH1307153.1050.6900.678-0.018
4AHTh171-A7164.8590.7320.7940.078
5AHTh2607153.5990.6760.7220.064
6AHTk2117153.4330.6900.7090.026
7AHTk2537131.5570.3520.3580.016
8C22.2797161.8560.4370.4610.054
9FH20017164.1240.7320.7570.033
10FH20547182.4580.5770.5930.027
11FH28487173.8540.7460.741-0.008
12INRA217152.3730.6060.579-0.047
13INU0057143.0640.6060.6740.101
14INU0307152.8940.6620.654-0.012
15INU0557162.4340.6340.589-0.076
16LEI0047132.2000.5350.5460.019
17REN105L037162.7290.5630.6340.111
18REN162C047131.8720.4790.466-0.028
19REN169D017131.7110.4510.416-0.084
20REN169O187152.4690.5070.5950.148
21REN247M237153.6380.6200.7250.145
22REN54P117153.9340.7890.746-0.058
23REN64E197141.2420.1550.1950.205
24VGL07607183.6360.6900.7250.048
25VGL09107194.9990.8030.800-0.004
26VGL10637183.7050.6060.7300.170
27VGL116571125.1890.7180.8070.110
28VGL18287152.9140.6900.657-0.051
29VGL20097131.6000.3800.375-0.015
30VGL24097143.3910.8030.705-0.139
31VGL29187163.2250.6760.6900.020
32VGL30087172.6990.6760.629-0.074
33VGL32357152.2420.6760.554-0.220

Standard genetic assessment for 7 STRs in the DLA region

Irish Red and White Setter

#LocusNNaNeHoHeF
1DLA I-3CCA7172.5150.5770.6020.041
2DLA I-4ACA7141.8860.4080.4700.130
3DLA I-4BCT7152.0700.4650.5170.101
4DLA11317162.4180.5490.5860.063
55ACA7142.2280.5490.5510.003
65ACT7153.2250.7610.690-0.102
75BCA7121.0580.0560.055-0.029