Statistics and Breed-wide Allele Frequency - Irish Setter

Updated Jul 11, 2025

DLA Class I Haplotype Frequencies

DLA1 #STR typesIrish Setter (n=61)
1008386 373 289 1820.107
1011376 365 281 1800.082
1014375 373 287 1780.295
1054382 379 277 1840.148
1068380 373 287 1810.008
1069380 365 281 1840.098
1128384 376 287 1820.008
1210380 365 277 1840.139
1211386 369 277 1830.115

DLA Class II Haplotype Frequencies

DLA2 #STR typesIrish Setter (n=61)
2005339 322 2800.090
2012345 322 2800.049
2015339 327 2800.139
2022339 327 2820.148
2037341 327 2800.295
2045339 325 2840.098
2052345 321 2800.107
2053343 324 2800.008
2079343 323 2780.008
2114345 323 2840.057

Allele Frequencies

#Locus NameAlleleIrish Setter (n=62)
1AHT121 1000.258
1020.274
1080.040
1100.121
1120.306
2AHT137 1310.331
1370.032
1410.024
1430.073
1450.065
1470.323
1490.153
3AHTH130 1170.823
1190.032
1230.040
1270.105
4AHTh171-A 2190.089
2210.008
2250.145
2270.040
2330.298
2370.419
5AHTh260 2400.048
2440.145
2460.508
2500.016
2520.194
2540.089
6AHTk211 870.081
890.081
910.798
930.040
7AHTk253 2840.008
2860.048
2880.105
2900.073
2920.766
8C22.279 1160.081
1180.258
1200.548
1220.008
1260.024
1300.081
9FH2001 1320.048
1360.008
1440.065
1480.774
1520.105
10FH2054 1520.347
1560.040
1600.097
1640.452
1680.008
1720.048
1760.008
11FH2848 2300.008
2340.048
2360.395
2380.355
2400.185
2420.008
12INRA21 930.008
950.379
970.306
1010.306
13INU005 1240.710
1260.097
1320.194
14INU030 1440.476
1480.024
1500.500
15INU055 2100.274
2120.226
2140.306
2160.194
16LEI004 850.274
950.532
970.194
17REN105L03 2330.040
2350.266
2370.008
2390.597
2410.089
18REN162C04 1980.411
2020.169
2060.210
2080.210
19REN169D01 2120.379
2160.169
2180.153
2200.016
2220.282
20REN169O18 1620.290
1640.121
1660.153
1680.403
1700.024
1720.008
21REN247M23 2680.710
2700.040
2720.008
2740.242
22REN54P11 2220.161
2260.226
2280.113
2320.419
2340.056
2380.024
23REN64E19 1390.016
1450.508
1470.427
1530.048
24VGL0760 130.089
140.847
19.20.032
20.20.016
23.20.016
25VGL0910 17.10.008
18.10.121
19.10.105
200.073
20.10.024
21.10.621
22.10.048
26VGL1063 90.153
130.331
140.024
150.008
170.129
180.355
27VGL1165 150.032
160.008
190.065
210.016
260.315
270.323
280.065
290.008
300.169
28VGL1828 140.073
160.056
170.048
200.065
210.347
220.411
29VGL2009 130.274
140.718
150.008
30VGL2409 150.226
160.565
170.048
180.048
190.113
31VGL2918 120.040
130.573
140.073
17.30.185
18.30.032
19.30.040
22.30.056
32VGL3008 140.008
150.282
160.048
170.315
180.258
190.016
220.032
230.024
240.016
33VGL3235 130.194
140.710
150.040
170.008
180.032
190.016

Standard genetic assessment based on 33 autosomal STR loci

Irish Setter

  NNaNeHoHeF
Mean625.3032.7580.5850.5940.010
 SE 0.2660.1510.0240.0250.014

Standard genetic assessment based on 7 STRs in the DLA region

Irish Setter

  NNaNeHoHeF
Mean625.0003.2150.5320.6690.210
 SE 0.3500.2900.0360.0330.024

Standard genetic assessment for individual STR loci

Irish Setter

#LocusNNaNeHoHeF
1AHT1216253.9690.7260.7480.030
2AHT1376274.0340.7740.752-0.029
3AHTH1306241.4490.3390.310-0.094
4AHTh171-A6263.3840.6290.7040.107
5AHTh2606263.0570.5160.6730.233
6AHTk2116241.5340.3390.3480.027
7AHTk2536251.6510.4520.394-0.145
8C22.2796262.6250.6290.619-0.016
9FH20016251.6210.3550.3830.074
10FH20546272.9610.5970.6620.099
11FH28486263.1350.7260.681-0.066
12INRA216243.0160.6130.6680.083
13INU0056231.8170.4350.4500.031
14INU0306232.0970.5480.523-0.048
15INU0556243.8830.7100.7420.044
16LEI0046232.5260.6130.604-0.015
17REN105L036252.2910.5810.563-0.030
18REN162C046243.4990.7580.714-0.061
19REN169D016253.6260.6770.7240.065
20REN169O186263.5010.6610.7140.074
21REN247M236241.7730.5160.436-0.183
22REN54P116263.7120.7580.731-0.038
23REN64E196242.2550.5320.5570.044
24VGL07606251.3770.2740.274-0.002
25VGL09106272.3840.6130.581-0.056
26VGL10636263.6230.6610.7240.087
27VGL11656294.1420.7420.7590.022
28VGL18286263.2850.7580.696-0.090
29VGL20096231.6940.4030.4100.016
30VGL24096252.5830.6290.613-0.026
31VGL29186272.6670.5810.6250.071
32VGL30086294.0040.7420.7500.011
33VGL32356261.8380.4030.4560.116

Standard genetic assessment for 7 STRs in the DLA region

Irish Setter

#LocusNNaNeHoHeF
1DLA I-3CCA6264.5570.6450.7810.173
2DLA I-4ACA6253.3250.5000.6990.285
3DLA I-4BCT6243.3280.5810.7000.170
4DLA11316263.7980.6290.7370.146
55ACA6242.8480.5000.6490.230
65ACT6262.6690.5320.6250.149
75BCA6241.9760.3390.4940.314