Statistics and Breed-wide Allele Frequency - Irish Setter

Updated Mar 28, 2024

DLA Class I Haplotype Frequencies

DLA1 #STR typesIrish Setter (n=60)
1008386 373 289 1820.092
1011376 365 281 1800.083
1014375 373 287 1780.300
1054382 379 277 1840.150
1068380 373 287 1810.008
1069380 365 281 1840.100
1128384 376 287 1820.008
1210380 365 277 1840.142
1211386 369 277 1830.117

DLA Class II Haplotype Frequencies

DLA2 #STR typesIrish Setter (n=60)
2005339 322 2800.092
2012345 322 2800.050
2015339 327 2800.142
2022339 327 2820.150
2037341 327 2800.300
2045339 325 2840.100
2052345 321 2800.092
2053343 324 2800.008
2079343 323 2780.008
2114345 323 2840.058

Allele Frequencies

#Locus NameAlleleIrish Setter (n=61)
1AHT121 1000.254
1020.279
1080.041
1100.115
1120.311
2AHT137 1310.320
1370.033
1410.025
1430.074
1450.066
1470.328
1490.156
3AHTH130 1170.820
1190.033
1230.041
1270.107
4AHTh171-A 2190.082
2250.148
2270.041
2330.303
2370.426
5AHTh260 2400.049
2440.139
2460.508
2500.016
2520.197
2540.090
6AHTk211 870.082
890.082
910.795
930.041
7AHTk253 2860.049
2880.107
2900.074
2920.770
8C22.279 1160.082
1180.262
1200.549
1220.008
1260.016
1300.082
9FH2001 1320.049
1440.057
1480.787
1520.107
10FH2054 1520.344
1560.041
1600.098
1640.459
1680.008
1720.049
11FH2848 2300.008
2340.049
2360.402
2380.352
2400.180
2420.008
12INRA21 930.008
950.377
970.311
1010.303
13INU005 1240.705
1260.098
1320.197
14INU030 1440.475
1480.025
1500.500
15INU055 2100.270
2120.230
2140.303
2160.197
16LEI004 850.279
950.533
970.189
17REN105L03 2330.041
2350.254
2370.008
2390.607
2410.090
18REN162C04 1980.418
2020.172
2060.197
2080.213
19REN169D01 2120.385
2160.172
2180.156
2200.016
2220.270
20REN169O18 1620.295
1640.123
1660.148
1680.402
1700.025
1720.008
21REN247M23 2680.713
2700.041
2740.246
22REN54P11 2220.156
2260.230
2280.115
2320.418
2340.057
2380.025
23REN64E19 1390.016
1450.500
1470.434
1530.049
24VGL0760 130.090
140.852
19.20.033
20.20.008
23.20.016
25VGL0910 17.10.008
18.10.123
19.10.107
200.074
20.10.025
21.10.623
22.10.041
26VGL1063 90.156
130.328
140.025
170.131
180.361
27VGL1165 150.033
160.008
190.066
210.016
260.320
270.320
280.066
290.008
300.164
28VGL1828 140.074
160.049
170.049
200.066
210.352
220.410
29VGL2009 130.279
140.721
30VGL2409 150.230
160.566
170.049
180.049
190.107
31VGL2918 120.041
130.582
140.066
17.30.189
18.30.033
19.30.033
22.30.057
32VGL3008 150.287
160.049
170.320
180.254
190.016
220.033
230.025
240.016
33VGL3235 130.197
140.713
150.041
180.033
190.016

Standard genetic assessment based on 33 autosomal STR loci

Irish Setter

  NNaNeHoHeF
Mean615.0302.7410.5820.5910.010
 SE 0.2660.1510.0250.0250.014

Standard genetic assessment based on 7 STRs in the DLA region

Irish Setter

  NNaNeHoHeF
Mean615.0003.1870.5410.6670.194
 SE 0.3500.2890.0370.0320.026

Standard genetic assessment for individual STR loci

Irish Setter

#LocusNNaNeHoHeF
1AHT1216153.9350.7210.7460.033
2AHT1376174.0760.7870.755-0.043
3AHTH1306141.4580.3440.314-0.096
4AHTh171-A6153.2910.6230.6960.105
5AHTh2606163.0560.5080.6730.245
6AHTk2116141.5450.3440.3530.024
7AHTk2536141.6320.4430.387-0.143
8C22.2796162.6030.6230.616-0.012
9FH20016141.5720.3440.3640.054
10FH20546162.9150.5900.6570.102
11FH28486163.1190.7210.679-0.062
12INRA216143.0190.6070.6690.093
13INU0056131.8340.4430.4550.027
14INU0306132.0980.5410.523-0.034
15INU0556143.8980.7050.7430.052
16LEI0046132.5180.6070.603-0.006
17REN105L036152.2610.5900.558-0.058
18REN162C046143.4660.7700.712-0.083
19REN169D016153.6270.6890.7240.049
20REN169O186163.4970.6560.7140.082
21REN247M236131.7520.5080.429-0.184
22REN54P116163.7210.7540.731-0.031
23REN64E196142.2650.5410.5590.032
24VGL07606151.3580.2620.2640.006
25VGL09106172.3680.6070.578-0.050
26VGL10636153.5760.6560.7200.090
27VGL11656194.1440.7380.7590.028
28VGL18286163.2600.7540.693-0.088
29VGL20096121.6720.3930.4020.021
30VGL24096152.5720.6230.611-0.019
31VGL29186172.5930.5740.6140.066
32VGL30086183.9420.7380.7460.012
33VGL32356151.8170.3930.4500.125

Standard genetic assessment for 7 STRs in the DLA region

Irish Setter

#LocusNNaNeHoHeF
1DLA I-3CCA6164.5520.6560.7800.160
2DLA I-4ACA6153.3610.5080.7020.277
3DLA I-4BCT6143.2550.5900.6930.148
4DLA11316163.7280.6390.7320.126
55ACA6142.8110.5080.6440.211
65ACT6162.6060.5410.6160.122
75BCA6141.9980.3440.4990.311