Statistics and Breed-wide Allele Frequency - Irish Setter

Updated Oct 30, 2025

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Irish Setter (n=61)
1008	386 373 289 182	0.107
1011	376 365 281 180	0.082
1014	375 373 287 178	0.295
1054	382 379 277 184	0.148
1068	380 373 287 181	0.008
1069	380 365 281 184	0.098
1128	384 376 287 182	0.008
1210	380 365 277 184	0.139
1211	386 369 277 183	0.115

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Irish Setter (n=61)
2005	339 322 280	0.090
2012	345 322 280	0.049
2015	339 327 280	0.139
2022	339 327 282	0.148
2037	341 327 280	0.295
2045	339 325 284	0.098
2052	345 321 280	0.107
2053	343 324 280	0.008
2079	343 323 278	0.008
2114	345 323 284	0.057

Allele Frequencies

#	Locus Name	Allele	Irish Setter (n=62)
1	AHT121	100	0.258
		102	0.274
		108	0.040
		110	0.121
		112	0.306
2	AHT137	131	0.331
		137	0.032
		141	0.024
		143	0.073
		145	0.065
		147	0.323
		149	0.153
3	AHTH130	117	0.823
		119	0.032
		123	0.040
		127	0.105
4	AHTh171-A	219	0.089
		221	0.008
		225	0.145
		227	0.040
		233	0.298
		237	0.419
5	AHTh260	240	0.048
		244	0.145
		246	0.508
		250	0.016
		252	0.194
		254	0.089
6	AHTk211	87	0.081
		89	0.081
		91	0.798
		93	0.040
7	AHTk253	284	0.008
		286	0.048
		288	0.105
		290	0.073
		292	0.766
8	C22.279	116	0.081
		118	0.258
		120	0.548
		122	0.008
		126	0.024
		130	0.081
9	FH2001	132	0.048
		136	0.008
		144	0.065
		148	0.774
		152	0.105
10	FH2054	152	0.347
		156	0.040
		160	0.097
		164	0.452
		168	0.008
		172	0.048
		176	0.008
11	FH2848	230	0.008
		234	0.048
		236	0.395
		238	0.355
		240	0.185
		242	0.008
12	INRA21	93	0.008
		95	0.379
		97	0.306
		101	0.306
13	INU005	124	0.710
		126	0.097
		132	0.194
14	INU030	144	0.476
		148	0.024
		150	0.500
15	INU055	210	0.274
		212	0.226
		214	0.306
		216	0.194
16	LEI004	85	0.274
		95	0.532
		97	0.194
17	REN105L03	233	0.040
		235	0.266
		237	0.008
		239	0.597
		241	0.089
18	REN162C04	198	0.411
		202	0.169
		206	0.210
		208	0.210
19	REN169D01	212	0.379
		216	0.169
		218	0.153
		220	0.016
		222	0.282
20	REN169O18	162	0.290
		164	0.121
		166	0.153
		168	0.403
		170	0.024
		172	0.008
21	REN247M23	268	0.710
		270	0.040
		272	0.008
		274	0.242
22	REN54P11	222	0.161
		226	0.226
		228	0.113
		232	0.419
		234	0.056
		238	0.024
23	REN64E19	139	0.016
		145	0.508
		147	0.427
		153	0.048
24	VGL0760	13	0.089
		14	0.847
		19.2	0.032
		20.2	0.016
		23.2	0.016
25	VGL0910	17.1	0.008
		18.1	0.121
		19.1	0.105
		20	0.073
		20.1	0.024
		21.1	0.621
		22.1	0.048
26	VGL1063	9	0.153
		13	0.331
		14	0.024
		15	0.008
		17	0.129
		18	0.355
27	VGL1165	15	0.032
		16	0.008
		19	0.065
		21	0.016
		26	0.315
		27	0.323
		28	0.065
		29	0.008
		30	0.169
28	VGL1828	14	0.073
		16	0.056
		17	0.048
		20	0.065
		21	0.347
		22	0.411
29	VGL2009	13	0.274
		14	0.718
		15	0.008
30	VGL2409	15	0.226
		16	0.565
		17	0.048
		18	0.048
		19	0.113
31	VGL2918	12	0.040
		13	0.573
		14	0.073
		17.3	0.185
		18.3	0.032
		19.3	0.040
		22.3	0.056
32	VGL3008	14	0.008
		15	0.282
		16	0.048
		17	0.315
		18	0.258
		19	0.016
		22	0.032
		23	0.024
		24	0.016
33	VGL3235	13	0.194
		14	0.710
		15	0.040
		17	0.008
		18	0.032
		19	0.016

Standard genetic assessment based on 33 autosomal STR loci

Irish Setter

		N	Na	Ne	Ho	He	F
	Mean	62	5.303	2.758	0.585	0.594	0.010
	SE		0.266	0.151	0.024	0.025	0.014

Standard genetic assessment based on 7 STRs in the DLA region

Irish Setter

		N	Na	Ne	Ho	He	F
	Mean	62	5.000	3.215	0.532	0.669	0.210
	SE		0.350	0.290	0.036	0.033	0.024

Standard genetic assessment for individual STR loci

Irish Setter

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	62	5	3.969	0.726	0.748	0.030
2	AHT137	62	7	4.034	0.774	0.752	-0.029
3	AHTH130	62	4	1.449	0.339	0.310	-0.094
4	AHTh171-A	62	6	3.384	0.629	0.704	0.107
5	AHTh260	62	6	3.057	0.516	0.673	0.233
6	AHTk211	62	4	1.534	0.339	0.348	0.027
7	AHTk253	62	5	1.651	0.452	0.394	-0.145
8	C22.279	62	6	2.625	0.629	0.619	-0.016
9	FH2001	62	5	1.621	0.355	0.383	0.074
10	FH2054	62	7	2.961	0.597	0.662	0.099
11	FH2848	62	6	3.135	0.726	0.681	-0.066
12	INRA21	62	4	3.016	0.613	0.668	0.083
13	INU005	62	3	1.817	0.435	0.450	0.031
14	INU030	62	3	2.097	0.548	0.523	-0.048
15	INU055	62	4	3.883	0.710	0.742	0.044
16	LEI004	62	3	2.526	0.613	0.604	-0.015
17	REN105L03	62	5	2.291	0.581	0.563	-0.030
18	REN162C04	62	4	3.499	0.758	0.714	-0.061
19	REN169D01	62	5	3.626	0.677	0.724	0.065
20	REN169O18	62	6	3.501	0.661	0.714	0.074
21	REN247M23	62	4	1.773	0.516	0.436	-0.183
22	REN54P11	62	6	3.712	0.758	0.731	-0.038
23	REN64E19	62	4	2.255	0.532	0.557	0.044
24	VGL0760	62	5	1.377	0.274	0.274	-0.002
25	VGL0910	62	7	2.384	0.613	0.581	-0.056
26	VGL1063	62	6	3.623	0.661	0.724	0.087
27	VGL1165	62	9	4.142	0.742	0.759	0.022
28	VGL1828	62	6	3.285	0.758	0.696	-0.090
29	VGL2009	62	3	1.694	0.403	0.410	0.016
30	VGL2409	62	5	2.583	0.629	0.613	-0.026
31	VGL2918	62	7	2.667	0.581	0.625	0.071
32	VGL3008	62	9	4.004	0.742	0.750	0.011
33	VGL3235	62	6	1.838	0.403	0.456	0.116

Standard genetic assessment for 7 STRs in the DLA region

Irish Setter

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	62	6	4.557	0.645	0.781	0.173
2	DLA I-4ACA	62	5	3.325	0.500	0.699	0.285
3	DLA I-4BCT	62	4	3.328	0.581	0.700	0.170
4	DLA1131	62	6	3.798	0.629	0.737	0.146
5	5ACA	62	4	2.848	0.500	0.649	0.230
6	5ACT	62	6	2.669	0.532	0.625	0.149
7	5BCA	62	4	1.976	0.339	0.494	0.314

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Irish Setter

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Irish Setter

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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