Statistics and Breed-wide Allele Frequency - Irish Setter

Updated Jul 24, 2026

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Irish Setter (n=63)
1008	386 373 289 182	0.111
1011	376 365 281 180	0.079
1014	375 373 287 178	0.286
1054	382 379 277 184	0.151
1068	380 373 287 181	0.008
1069	380 365 281 184	0.095
1128	384 376 287 182	0.008
1142	376 379 277 180	0.008
1210	380 365 277 184	0.135
1211	386 369 277 183	0.119

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Irish Setter (n=63)
2005	339 322 280	0.095
2012	345 322 280	0.048
2015	339 327 280	0.135
2018	339 324 284	0.008
2022	339 327 282	0.151
2037	341 327 280	0.286
2045	339 325 284	0.095
2052	345 321 280	0.111
2053	343 324 280	0.008
2079	343 323 278	0.008
2114	345 323 284	0.056

Allele Frequencies

#	Locus Name	Allele	Irish Setter (n=64)
1	AHT121	100	0.266
		102	0.266
		106	0.016
		108	0.039
		110	0.117
		112	0.297
2	AHT137	131	0.320
		137	0.039
		141	0.031
		143	0.070
		145	0.063
		147	0.313
		149	0.156
		151	0.008
3	AHTH130	117	0.805
		119	0.031
		121	0.016
		123	0.039
		127	0.109
4	AHTh171-A	219	0.102
		221	0.008
		225	0.141
		227	0.039
		233	0.297
		235	0.008
		237	0.406
5	AHTh260	240	0.047
		244	0.141
		246	0.523
		250	0.016
		252	0.188
		254	0.086
6	AHTk211	87	0.078
		89	0.086
		91	0.797
		93	0.039
7	AHTk253	284	0.016
		286	0.047
		288	0.117
		290	0.070
		292	0.750
8	C22.279	116	0.094
		118	0.250
		120	0.547
		122	0.008
		126	0.023
		130	0.078
9	FH2001	132	0.047
		136	0.008
		144	0.070
		148	0.773
		152	0.102
10	FH2054	152	0.336
		156	0.047
		160	0.094
		164	0.438
		168	0.008
		172	0.055
		176	0.023
11	FH2848	230	0.008
		234	0.047
		236	0.383
		238	0.359
		240	0.188
		242	0.016
12	INRA21	93	0.008
		95	0.367
		97	0.297
		101	0.328
13	INU005	124	0.711
		126	0.102
		132	0.188
14	INU030	144	0.477
		148	0.023
		150	0.500
15	INU055	210	0.273
		212	0.219
		214	0.320
		216	0.188
16	LEI004	85	0.281
		95	0.523
		97	0.195
17	REN105L03	233	0.039
		235	0.266
		237	0.008
		239	0.578
		241	0.109
18	REN162C04	198	0.422
		202	0.172
		206	0.203
		208	0.203
19	REN169D01	202	0.016
		212	0.383
		216	0.164
		218	0.148
		220	0.016
		222	0.273
20	REN169O18	162	0.297
		164	0.133
		166	0.148
		168	0.391
		170	0.023
		172	0.008
21	REN247M23	268	0.703
		270	0.039
		272	0.023
		274	0.234
22	REN54P11	222	0.164
		226	0.234
		228	0.109
		232	0.414
		234	0.055
		238	0.023
23	REN64E19	139	0.016
		145	0.500
		147	0.422
		153	0.063
24	VGL0760	13	0.086
		14	0.828
		19.2	0.031
		20.2	0.016
		22.2	0.016
		23.2	0.023
25	VGL0910	17.1	0.008
		18.1	0.117
		19.1	0.117
		20	0.070
		20.1	0.039
		21.1	0.602
		22.1	0.047
26	VGL1063	8	0.016
		9	0.148
		13	0.328
		14	0.023
		15	0.008
		17	0.125
		18	0.344
		19	0.008
27	VGL1165	14	0.008
		15	0.031
		16	0.016
		18	0.008
		19	0.063
		21	0.016
		26	0.305
		27	0.320
		28	0.063
		29	0.008
		30	0.164
28	VGL1828	14	0.070
		16	0.063
		17	0.047
		19	0.008
		20	0.070
		21	0.344
		22	0.398
29	VGL2009	13	0.266
		14	0.719
		15	0.016
30	VGL2409	15	0.219
		16	0.555
		17	0.063
		18	0.055
		19	0.109
31	VGL2918	12	0.039
		13	0.563
		14	0.070
		15	0.008
		17.3	0.180
		18.3	0.031
		19.3	0.047
		20.3	0.008
		22.3	0.055
32	VGL3008	14	0.016
		15	0.273
		16	0.063
		17	0.305
		18	0.250
		19	0.016
		20	0.008
		22	0.031
		23	0.023
		24	0.016
33	VGL3235	13	0.188
		14	0.695
		15	0.039
		16	0.016
		17	0.016
		18	0.031
		19	0.016

Standard genetic assessment based on 33 autosomal STR loci

Irish Setter

		N	Na	Ne	Ho	He	F
	Mean	64	5.758	2.823	0.591	0.603	0.016
	SE		0.340	0.156	0.024	0.025	0.014

Standard genetic assessment based on 7 STRs in the DLA region

Irish Setter

		N	Na	Ne	Ho	He	F
	Mean	64	5.000	3.252	0.542	0.673	0.198
	SE		0.350	0.296	0.035	0.032	0.021

Standard genetic assessment for individual STR loci

Irish Setter

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	64	6	4.086	0.734	0.755	0.028
2	AHT137	64	8	4.236	0.781	0.764	-0.023
3	AHTH130	64	5	1.510	0.359	0.338	-0.064
4	AHTh171-A	64	7	3.510	0.641	0.715	0.104
5	AHTh260	64	6	2.952	0.500	0.661	0.244
6	AHTk211	64	4	1.538	0.344	0.350	0.018
7	AHTk253	64	5	1.713	0.453	0.416	-0.088
8	C22.279	64	6	2.652	0.641	0.623	-0.028
9	FH2001	64	5	1.624	0.359	0.384	0.065
10	FH2054	64	7	3.136	0.609	0.681	0.105
11	FH2848	64	6	3.191	0.734	0.687	-0.070
12	INRA21	64	4	3.024	0.594	0.669	0.113
13	INU005	64	3	1.815	0.438	0.449	0.026
14	INU030	64	3	2.094	0.563	0.522	-0.077
15	INU055	64	4	3.841	0.703	0.740	0.049
16	LEI004	64	3	2.556	0.625	0.609	-0.027
17	REN105L03	64	5	2.390	0.578	0.582	0.006
18	REN162C04	64	4	3.448	0.750	0.710	-0.056
19	REN169D01	64	6	3.693	0.688	0.729	0.057
20	REN169O18	64	6	3.559	0.672	0.719	0.066
21	REN247M23	64	4	1.814	0.531	0.449	-0.184
22	REN54P11	64	6	3.720	0.766	0.731	-0.047
23	REN64E19	64	4	2.314	0.531	0.568	0.064
24	VGL0760	64	6	1.438	0.281	0.305	0.077
25	VGL0910	64	7	2.512	0.625	0.602	-0.038
26	VGL1063	64	8	3.782	0.672	0.736	0.087
27	VGL1165	64	11	4.314	0.750	0.768	0.024
28	VGL1828	64	7	3.413	0.766	0.707	-0.083
29	VGL2009	64	3	1.702	0.406	0.413	0.015
30	VGL2409	64	5	2.671	0.641	0.626	-0.024
31	VGL2918	64	9	2.767	0.594	0.639	0.070
32	VGL3008	64	10	4.231	0.750	0.764	0.018
33	VGL3235	64	7	1.916	0.422	0.478	0.118

Standard genetic assessment for 7 STRs in the DLA region

Irish Setter

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	64	6	4.620	0.656	0.784	0.162
2	DLA I-4ACA	64	5	3.392	0.516	0.705	0.269
3	DLA I-4BCT	64	4	3.310	0.578	0.698	0.172
4	DLA1131	64	6	3.877	0.641	0.742	0.137
5	5ACA	64	4	2.820	0.500	0.645	0.225
6	5ACT	64	6	2.744	0.547	0.636	0.140
7	5BCA	64	4	1.998	0.359	0.500	0.281

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Irish Setter

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Irish Setter

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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