Updated Feb 10, 2025
DLA Class I Haplotype Frequencies
DLA1 # | STR types | Italian Greyhound (n=1541) |
---|---|---|
1008 | 386 373 289 182 | 0.1194 |
1012 | 388 369 289 188 | 0.0088 |
1016 | 382 371 277 178 | 0.0620 |
1030 | 380 373 293 178 | 0.0295 |
1036 | 389 365 289 180 | 0.0010 |
1040 | 380 371 277 186 | 0.0762 |
1044 | 375 373 291 178 | 0.2508 |
1048 | 380 370 289 184 | 0.0114 |
1049 | 380 370 289 186 | 0.0006 |
1050 | 380 371 289 182 | 0.0006 |
1051 | 380 371 289 184 | 0.0013 |
1052 | 380 372 289 184 | 0.1853 |
1053 | 382 377 277 186 | 0.1152 |
1054 | 382 379 277 184 | 0.0156 |
1055 | 386 373 289 180 | 0.0003 |
1056 | 386 373 289 190 | 0.0045 |
1058 | 387 378 287 186 | 0.0055 |
1059 | 390 371 291 182 | 0.1064 |
1065 | 380 371 277 181 | 0.0003 |
1104 | 386 373 289 186 | 0.0023 |
1228 | 390 373 289 176 | 0.0013 |
1235 | 388 369 289 190 | 0.0006 |
1269 | 375 373 277 186 | 0.0006 |
1272 | 386 373 291 178 | 0.0003 |
DLA Class II Haplotype Frequencies
DLA2 # | STR types | Italian Greyhound (n=1541) |
---|---|---|
2003 | 343 324 282 | 0.0078 |
2014 | 339 322 284 | 0.0013 |
2015 | 339 327 280 | 0.0107 |
2017 | 343 322 280 | 0.2099 |
2023 | 341 323 282 | 0.0295 |
2029 | 337 324 268 | 0.1064 |
2030 | 339 322 268 | 0.0003 |
2031 | 339 322 282 | 0.0616 |
2032 | 339 323 280 | 0.0328 |
2033 | 339 323 282 | 0.0045 |
2034 | 341 322 280 | 0.2508 |
2035 | 341 323 280 | 0.0879 |
2036 | 341 327 276 | 0.0977 |
2037 | 341 327 280 | 0.0081 |
2038 | 345 324 280 | 0.0065 |
2039 | 345 327 276 | 0.0795 |
2040 | 345 327 280 | 0.0010 |
2041 | 349 321 280 | 0.0010 |
2044 | 343 324 268 | 0.0003 |
2067 | 343 322 284 | 0.0003 |
2081 | 343 322 282 | 0.0006 |
2102 | 341 327 268 | 0.0010 |
2132 | 341 322 282 | 0.0003 |
Allele Frequencies
# | Locus Name | Allele | Italian Greyhound (n=1545) |
---|---|---|---|
1 | AHT121 | 94 | 0.0006 |
96 | 0.1216 | ||
98 | 0.1455 | ||
100 | 0.2329 | ||
102 | 0.2041 | ||
104 | 0.0495 | ||
106 | 0.1449 | ||
108 | 0.0644 | ||
110 | 0.0116 | ||
112 | 0.0236 | ||
114 | 0.0010 | ||
116 | 0.0003 | ||
2 | AHT137 | 131 | 0.0664 |
133 | 0.1321 | ||
135 | 0.0006 | ||
137 | 0.1062 | ||
141 | 0.0385 | ||
143 | 0.3970 | ||
147 | 0.1972 | ||
149 | 0.0006 | ||
151 | 0.0612 | ||
3 | AHTH130 | 119 | 0.3294 |
121 | 0.2047 | ||
123 | 0.0006 | ||
127 | 0.2271 | ||
129 | 0.0955 | ||
131 | 0.0315 | ||
133 | 0.0003 | ||
137 | 0.1105 | ||
141 | 0.0003 | ||
4 | AHTh171-A | 219 | 0.0227 |
225 | 0.0528 | ||
227 | 0.3071 | ||
229 | 0.0003 | ||
233 | 0.0003 | ||
235 | 0.0071 | ||
237 | 0.6042 | ||
241 | 0.0055 | ||
5 | AHTh260 | 238 | 0.0036 |
240 | 0.3454 | ||
242 | 0.0003 | ||
244 | 0.0655 | ||
246 | 0.2200 | ||
248 | 0.0010 | ||
250 | 0.0645 | ||
252 | 0.0136 | ||
254 | 0.2855 | ||
256 | 0.0003 | ||
260 | 0.0003 | ||
6 | AHTk211 | 87 | 0.6104 |
89 | 0.0220 | ||
91 | 0.1613 | ||
95 | 0.2063 | ||
7 | AHTk253 | 286 | 0.1960 |
288 | 0.5479 | ||
290 | 0.0631 | ||
292 | 0.1931 | ||
8 | C22.279 | 116 | 0.0615 |
118 | 0.0084 | ||
124 | 0.9278 | ||
126 | 0.0013 | ||
128 | 0.0010 | ||
9 | FH2001 | 132 | 0.1521 |
136 | 0.0081 | ||
140 | 0.0016 | ||
144 | 0.0859 | ||
148 | 0.7221 | ||
152 | 0.0295 | ||
156 | 0.0006 | ||
10 | FH2054 | 152 | 0.0003 |
156 | 0.0360 | ||
160 | 0.1297 | ||
164 | 0.0827 | ||
168 | 0.2724 | ||
172 | 0.3145 | ||
176 | 0.1479 | ||
180 | 0.0149 | ||
184 | 0.0016 | ||
11 | FH2848 | 228 | 0.0327 |
232 | 0.0165 | ||
234 | 0.0036 | ||
236 | 0.0418 | ||
238 | 0.2032 | ||
240 | 0.6471 | ||
242 | 0.0010 | ||
244 | 0.0541 | ||
12 | INRA21 | 95 | 0.5372 |
97 | 0.1412 | ||
99 | 0.0055 | ||
101 | 0.3161 | ||
13 | INU005 | 106 | 0.0139 |
120 | 0.0074 | ||
122 | 0.0013 | ||
124 | 0.4608 | ||
126 | 0.4106 | ||
128 | 0.0003 | ||
130 | 0.1017 | ||
132 | 0.0039 | ||
14 | INU030 | 144 | 0.1285 |
148 | 0.0049 | ||
150 | 0.8579 | ||
152 | 0.0087 | ||
15 | INU055 | 204 | 0.0728 |
210 | 0.3052 | ||
212 | 0.0003 | ||
214 | 0.3900 | ||
218 | 0.2314 | ||
222 | 0.0003 | ||
16 | LEI004 | 95 | 0.6001 |
103 | 0.0016 | ||
107 | 0.3895 | ||
109 | 0.0016 | ||
111 | 0.0029 | ||
113 | 0.0042 | ||
17 | REN105L03 | 227 | 0.0434 |
229 | 0.0006 | ||
231 | 0.2209 | ||
233 | 0.5476 | ||
239 | 0.0003 | ||
241 | 0.1872 | ||
18 | REN162C04 | 202 | 0.2477 |
204 | 0.0334 | ||
206 | 0.7189 | ||
19 | REN169D01 | 202 | 0.1043 |
210 | 0.1525 | ||
212 | 0.0188 | ||
214 | 0.0006 | ||
216 | 0.4135 | ||
218 | 0.0003 | ||
220 | 0.3099 | ||
20 | REN169O18 | 162 | 0.2374 |
164 | 0.0823 | ||
166 | 0.0188 | ||
168 | 0.4339 | ||
170 | 0.2277 | ||
21 | REN247M23 | 266 | 0.0016 |
268 | 0.3063 | ||
270 | 0.2267 | ||
272 | 0.1671 | ||
274 | 0.2675 | ||
276 | 0.0308 | ||
22 | REN54P11 | 222 | 0.1612 |
226 | 0.0126 | ||
228 | 0.0359 | ||
232 | 0.3343 | ||
234 | 0.0210 | ||
236 | 0.0003 | ||
238 | 0.4346 | ||
23 | REN64E19 | 139 | 0.0207 |
143 | 0.4515 | ||
145 | 0.2883 | ||
147 | 0.1971 | ||
149 | 0.0417 | ||
153 | 0.0006 | ||
24 | VGL0760 | 19.2 | 0.0029 |
20.2 | 0.1906 | ||
21.2 | 0.5081 | ||
22.2 | 0.1246 | ||
23.2 | 0.1634 | ||
24.2 | 0.0097 | ||
25.2 | 0.0006 | ||
25 | VGL0910 | 13 | 0.0669 |
14 | 0.0210 | ||
15 | 0.0188 | ||
16.1 | 0.1122 | ||
17.1 | 0.3842 | ||
18.1 | 0.0627 | ||
19.1 | 0.2455 | ||
20.1 | 0.0647 | ||
20.2 | 0.0006 | ||
21.1 | 0.0230 | ||
22.1 | 0.0003 | ||
26 | VGL1063 | 8 | 0.1135 |
11 | 0.0045 | ||
12 | 0.0010 | ||
13 | 0.2529 | ||
14 | 0.3803 | ||
15 | 0.0184 | ||
17 | 0.0058 | ||
18 | 0.0637 | ||
19 | 0.1569 | ||
20 | 0.0029 | ||
27 | VGL1165 | 18 | 0.0207 |
19 | 0.3357 | ||
20 | 0.0365 | ||
21 | 0.0133 | ||
22 | 0.0006 | ||
23 | 0.1323 | ||
24 | 0.0511 | ||
25 | 0.1708 | ||
26 | 0.0023 | ||
27 | 0.0019 | ||
28 | 0.0016 | ||
29 | 0.1750 | ||
30 | 0.0553 | ||
31 | 0.0029 | ||
28 | VGL1828 | 14 | 0.0065 |
15 | 0.0809 | ||
16 | 0.0641 | ||
17 | 0.1010 | ||
18 | 0.3304 | ||
19 | 0.3579 | ||
20 | 0.0223 | ||
21 | 0.0366 | ||
22 | 0.0003 | ||
29 | VGL2009 | 9 | 0.1041 |
10 | 0.2665 | ||
11 | 0.1588 | ||
13 | 0.3913 | ||
14 | 0.0728 | ||
15 | 0.0052 | ||
16 | 0.0013 | ||
30 | VGL2409 | 13 | 0.0469 |
14 | 0.0010 | ||
15 | 0.0291 | ||
16 | 0.0129 | ||
17 | 0.1462 | ||
18 | 0.4780 | ||
19 | 0.2801 | ||
20 | 0.0058 | ||
31 | VGL2918 | 7 | 0.0126 |
12 | 0.0621 | ||
13 | 0.1602 | ||
13.2 | 0.0042 | ||
14 | 0.2091 | ||
15 | 0.0638 | ||
16 | 0.0019 | ||
17.3 | 0.0091 | ||
18.3 | 0.2259 | ||
19.3 | 0.0489 | ||
20.3 | 0.1055 | ||
21.3 | 0.0754 | ||
22.3 | 0.0110 | ||
23.3 | 0.0094 | ||
24.3 | 0.0010 | ||
32 | VGL3008 | 15 | 0.1601 |
16 | 0.1051 | ||
17 | 0.1785 | ||
18 | 0.2814 | ||
19 | 0.2519 | ||
20 | 0.0191 | ||
21 | 0.0039 | ||
33 | VGL3235 | 13 | 0.0006 |
14 | 0.2728 | ||
15 | 0.1301 | ||
16 | 0.0074 | ||
17 | 0.3861 | ||
18 | 0.1867 | ||
19 | 0.0152 | ||
20 | 0.0006 | ||
21 | 0.0003 |
Standard genetic assessment based on 33 autosomal STR loci
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 1545 | 7.606 | 3.341 | 0.612 | 0.648 | 0.056 | |
SE | 0.485 | 0.222 | 0.026 | 0.028 | 0.005 |
Standard genetic assessment based on 7 STRs in the DLA region
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 1545 | 6.714 | 3.385 | 0.663 | 0.693 | 0.042 | |
SE | 0.661 | 0.250 | 0.020 | 0.024 | 0.005 |
Standard genetic assessment for individual STR loci
Italian Greyhound
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | AHT121 | 1545 | 12 | 6.245 | 0.798 | 0.840 | 0.050 |
2 | AHT137 | 1545 | 9 | 4.257 | 0.718 | 0.765 | 0.062 |
3 | AHTH130 | 1545 | 9 | 4.458 | 0.762 | 0.776 | 0.017 |
4 | AHTh171-A | 1545 | 8 | 2.161 | 0.489 | 0.537 | 0.090 |
5 | AHTh260 | 1545 | 11 | 3.878 | 0.683 | 0.742 | 0.080 |
6 | AHTk211 | 1545 | 4 | 2.264 | 0.519 | 0.558 | 0.070 |
7 | AHTk253 | 1545 | 4 | 2.633 | 0.587 | 0.620 | 0.054 |
8 | C22.279 | 1545 | 5 | 1.156 | 0.121 | 0.135 | 0.105 |
9 | FH2001 | 1545 | 7 | 1.809 | 0.427 | 0.447 | 0.044 |
10 | FH2054 | 1545 | 9 | 4.542 | 0.747 | 0.780 | 0.042 |
11 | FH2848 | 1545 | 8 | 2.146 | 0.513 | 0.534 | 0.039 |
12 | INRA21 | 1545 | 4 | 2.448 | 0.560 | 0.592 | 0.053 |
13 | INU005 | 1545 | 8 | 2.554 | 0.593 | 0.608 | 0.026 |
14 | INU030 | 1545 | 4 | 1.329 | 0.235 | 0.247 | 0.050 |
15 | INU055 | 1545 | 6 | 3.289 | 0.634 | 0.696 | 0.090 |
16 | LEI004 | 1545 | 6 | 1.954 | 0.506 | 0.488 | -0.037 |
17 | REN105L03 | 1545 | 6 | 2.594 | 0.589 | 0.614 | 0.042 |
18 | REN162C04 | 1545 | 3 | 1.726 | 0.389 | 0.421 | 0.076 |
19 | REN169D01 | 1545 | 7 | 3.316 | 0.645 | 0.698 | 0.076 |
20 | REN169O18 | 1545 | 5 | 3.294 | 0.629 | 0.696 | 0.097 |
21 | REN247M23 | 1545 | 6 | 4.071 | 0.712 | 0.754 | 0.056 |
22 | REN54P11 | 1545 | 7 | 3.044 | 0.652 | 0.671 | 0.028 |
23 | REN64E19 | 1545 | 6 | 3.049 | 0.659 | 0.672 | 0.020 |
24 | VGL0760 | 1545 | 7 | 2.969 | 0.597 | 0.663 | 0.099 |
25 | VGL0910 | 1545 | 11 | 4.266 | 0.754 | 0.766 | 0.015 |
26 | VGL1063 | 1545 | 10 | 3.991 | 0.732 | 0.749 | 0.024 |
27 | VGL1165 | 1545 | 14 | 5.061 | 0.778 | 0.802 | 0.030 |
28 | VGL1828 | 1545 | 9 | 3.846 | 0.670 | 0.740 | 0.095 |
29 | VGL2009 | 1545 | 7 | 3.766 | 0.682 | 0.734 | 0.072 |
30 | VGL2409 | 1545 | 8 | 3.016 | 0.616 | 0.668 | 0.079 |
31 | VGL2918 | 1545 | 15 | 6.757 | 0.806 | 0.852 | 0.053 |
32 | VGL3008 | 1545 | 7 | 4.727 | 0.755 | 0.788 | 0.043 |
33 | VGL3235 | 1545 | 9 | 3.629 | 0.652 | 0.724 | 0.099 |
Standard genetic assessment for 7 STRs in the DLA region
Italian Greyhound
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | DLA I-3CCA | 1545 | 8 | 4.518 | 0.729 | 0.779 | 0.063 |
2 | DLA I-4ACA | 1545 | 9 | 3.619 | 0.699 | 0.724 | 0.034 |
3 | DLA I-4BCT | 1545 | 5 | 3.170 | 0.654 | 0.685 | 0.045 |
4 | DLA1131 | 1545 | 9 | 3.931 | 0.701 | 0.746 | 0.060 |
5 | 5ACA | 1545 | 6 | 3.277 | 0.670 | 0.695 | 0.035 |
6 | 5ACT | 1545 | 5 | 2.827 | 0.627 | 0.646 | 0.030 |
7 | 5BCA | 1545 | 5 | 2.354 | 0.561 | 0.575 | 0.025 |