Statistics and Breed-wide Allele Frequency - Italian Greyhound

Updated Aug 9, 2020

DLA Class I Haplotype Frequencies

DLA1 #STR typesItalian Greyhound (n=990)
1008386 373 289 1820.1242
1012388 369 289 1880.0071
1016382 371 277 1780.0591
1030380 373 293 1780.0283
1036389 365 289 1800.0005
1040380 371 277 1860.0859
1044375 373 291 1780.2601
1048380 370 289 1840.0121
1049380 370 289 1860.0005
1050380 371 289 1820.0010
1051380 371 289 1840.0020
1052380 372 289 1840.1874
1053382 377 277 1860.0960
1054382 379 277 1840.0146
1055386 373 289 1800.0005
1056386 373 289 1900.0056
1058387 378 287 1860.0076
1059390 371 291 1820.1020
1065380 371 277 1810.0005
1104386 373 289 1860.0020
1169375 373 277 1860.0005
1228390 373 289 1760.0015
1235388 369 289 1900.0010

DLA Class II Haplotype Frequencies

DLA2 #STR typesItalian Greyhound (n=990)
2003343 324 2820.0066
2014339 322 2840.0015
2015339 327 2800.0096
2017343 322 2800.2167
2023341 323 2820.0283
2029337 324 2680.1020
2030339 322 2680.0005
2031339 322 2820.0586
2032339 323 2800.0409
2033339 323 2820.0045
2034341 322 2800.2601
2035341 323 2800.0854
2036341 327 2760.0758
2037341 327 2800.0076
2038345 324 2800.0086
2039345 327 2760.0894
2040345 327 2800.0015
2041349 321 2800.0005
2044343 324 2680.0005
2067343 322 2840.0005
2102341 327 2680.0010

Allele Frequencies

#Locus NameAlleleItalian Greyhound (n=1006)
1AHT121 940.0010
960.1266
980.1417
1000.2347
1020.2095
1040.0462
1060.1472
1080.0497
1100.0161
1120.0256
1140.0015
2AHT137 1310.0687
1330.1184
1350.0010
1370.1124
1410.0493
1430.4060
1470.1861
1510.0582
3AHTH130 1190.3248
1210.2130
1270.2311
1290.0851
1310.0322
1330.0005
1370.1128
1410.0005
4AHTh171-A 2190.0226
2250.0498
2270.3028
2330.0005
2350.0086
2370.6117
2410.0040
5AHTh260 2380.0045
2400.3325
2420.0005
2440.0627
2460.2222
2480.0015
2500.0848
2520.0171
2540.2738
2560.0005
6AHTk211 870.5962
890.0227
910.1641
950.2170
7AHTk253 2860.1960
2880.5533
2900.0643
2920.1864
8C22.279 1160.0654
1180.0101
1240.9220
1260.0010
1280.0015
9FH2001 1320.1589
1360.0106
1400.0020
1440.0827
1480.7149
1520.0308
10FH2054 1520.0005
1560.0303
1600.1241
1640.0817
1680.2674
1720.3224
1760.1544
1800.0166
1840.0025
11FH2848 2280.0319
2320.0194
2340.0035
2360.0393
2380.1982
2400.6429
2420.0010
2440.0637
12INRA21 950.5514
970.1334
990.0060
1010.3092
13INU005 1060.0166
1200.0086
1220.0020
1240.4648
1260.4048
1280.0005
1300.0997
1320.0030
14INU030 1440.1429
1480.0055
1500.8400
1520.0116
15INU055 2040.0739
2100.3038
2140.3959
2180.2259
2220.0005
16LEI004 950.6114
1030.0020
1070.3800
1090.0005
1110.0035
1130.0025
17REN105L03 2270.0473
2290.0010
2310.2229
2330.5408
2390.0005
2410.1876
18REN162C04 2020.2377
2040.0302
2060.7321
19REN169D01 2020.1100
2100.1577
2120.0239
2140.0010
2160.3920
2180.0005
2200.3149
20REN169O18 1620.2602
1640.0915
1660.0199
1680.4025
1700.2259
21REN247M23 2660.0015
2680.3144
2700.2408
2720.1577
2740.2448
2760.0408
22REN54P11 2220.1620
2260.0131
2280.0428
2320.3410
2340.0246
2380.4165
23REN64E19 1390.0241
1430.4532
1450.2777
1470.1982
1490.0468
24VGL0760 19.20.0035
20.20.2022
21.20.4940
22.20.1177
23.20.1700
24.20.0116
25.20.0010
25VGL0910 130.0724
140.0211
150.0211
16.10.0899
17.10.3980
18.10.0558
19.10.2533
20.10.0648
20.20.0010
21.10.0226
26VGL1063 80.1116
110.0035
120.0015
130.2638
140.3734
150.0211
170.0065
180.0673
190.1482
200.0030
27VGL1165 180.0231
190.3296
200.0372
210.0131
220.0010
230.1221
240.0563
250.1618
260.0025
270.0020
280.0020
290.1915
300.0548
310.0030
28VGL1828 140.0075
150.0820
160.0684
170.0991
180.3058
190.3732
200.0252
210.0382
220.0005
29VGL2009 90.1121
100.2342
110.1533
130.4171
140.0749
150.0070
160.0015
30VGL2409 130.0518
140.0005
150.0241
160.0166
170.1372
180.4774
190.2864
200.0060
31VGL2918 70.0136
120.0659
130.1705
13.20.0065
140.1766
150.0674
160.0010
17.30.0116
18.30.2294
19.30.0463
20.30.1087
21.30.0835
22.30.0091
23.30.0091
24.30.0010
32VGL3008 150.1548
160.1065
170.1920
180.2734
190.2538
200.0161
210.0035
33VGL3235 130.0005
140.2988
150.1298
160.0075
170.3717
180.1715
190.0191
200.0005
210.0005

Standard genetic assessment based on 33 autosomal STR loci

  NNaNeHoHeF
Italian GreyhoundMean10067.3033.3630.6130.6500.059
 SE 0.4720.2240.0260.0270.005

Standard genetic assessment based on 7 STRs in the DLA region

  NNaNeHoHeF
Italian GreyhoundMean10066.7143.3410.6470.6880.058
 SE 0.6610.2520.0210.0260.006

Standard genetic assessment for individual STR loci

#LocusNNaNeHoHeF
1AHT1211006116.1610.8000.8380.045
2AHT137100684.2260.7100.7630.069
3AHTH130100684.4390.7560.7750.024
4AHTh171-A100672.1330.4850.5310.087
5AHTh2601006104.0600.6820.7540.095
6AHTk211100642.3260.5320.5700.067
7AHTk253100642.6080.5800.6170.060
8C22.279100651.1700.1280.1450.122
9FH2001100661.8370.4330.4560.050
10FH2054100694.4930.7380.7770.051
11FH2848100682.1760.5160.5400.045
12INRA21100642.3960.5500.5830.056
13INU005100682.5630.6020.6100.012
14INU030100641.3770.2590.2740.056
15INU055100653.2730.6070.6940.127
16LEI004100661.9300.4900.482-0.017
17REN105L03100662.6350.5810.6200.063
18REN162C04100631.6850.3800.4070.066
19REN169D01100673.4430.6630.7100.066
20REN169O18100653.4540.6490.7110.087
21REN247M23100664.1100.7270.7570.039
22REN54P11100663.1380.6480.6810.049
23REN64E19100653.0810.6660.6750.014
24VGL0760100673.0510.6080.6720.096
25VGL09101006104.0890.7340.7550.029
26VGL10631006104.0250.7270.7520.033
27VGL11651006145.1360.7810.8050.030
28VGL1828100693.9030.6800.7440.086
29VGL2009100673.6970.6750.7290.074
30VGL2409100683.0090.6230.6680.067
31VGL29181006156.9830.8010.8570.065
32VGL3008100674.7270.7470.7880.053
33VGL3235100693.6480.6580.7260.094

Standard genetic assessment for 7 STRs in the DLA region

#LocusNNaNeHoHeF
1DLA I-3CCA100684.4270.7200.7740.070
2DLA I-4ACA100693.4970.6810.7140.046
3DLA I-4BCT100653.1530.6370.6830.067
4DLA1131100693.9070.6810.7440.084
55ACA100663.4040.6640.7060.060
65ACT100652.7580.6090.6370.044
75BCA100652.2420.5350.5540.035