Statistics and Breed-wide Allele Frequency - Italian Greyhound

Updated Aug 9, 2020

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Italian Greyhound (n=990)
1008	386 373 289 182	0.1242
1012	388 369 289 188	0.0071
1016	382 371 277 178	0.0591
1030	380 373 293 178	0.0283
1036	389 365 289 180	0.0005
1040	380 371 277 186	0.0859
1044	375 373 291 178	0.2601
1048	380 370 289 184	0.0121
1049	380 370 289 186	0.0005
1050	380 371 289 182	0.0010
1051	380 371 289 184	0.0020
1052	380 372 289 184	0.1874
1053	382 377 277 186	0.0960
1054	382 379 277 184	0.0146
1055	386 373 289 180	0.0005
1056	386 373 289 190	0.0056
1058	387 378 287 186	0.0076
1059	390 371 291 182	0.1020
1065	380 371 277 181	0.0005
1104	386 373 289 186	0.0020
1169	375 373 277 186	0.0005
1228	390 373 289 176	0.0015
1235	388 369 289 190	0.0010

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Italian Greyhound (n=990)
2003	343 324 282	0.0066
2014	339 322 284	0.0015
2015	339 327 280	0.0096
2017	343 322 280	0.2167
2023	341 323 282	0.0283
2029	337 324 268	0.1020
2030	339 322 268	0.0005
2031	339 322 282	0.0586
2032	339 323 280	0.0409
2033	339 323 282	0.0045
2034	341 322 280	0.2601
2035	341 323 280	0.0854
2036	341 327 276	0.0758
2037	341 327 280	0.0076
2038	345 324 280	0.0086
2039	345 327 276	0.0894
2040	345 327 280	0.0015
2041	349 321 280	0.0005
2044	343 324 268	0.0005
2067	343 322 284	0.0005
2102	341 327 268	0.0010

Allele Frequencies

#	Locus Name	Allele	Italian Greyhound (n=1006)
1	AHT121	94	0.0010
		96	0.1266
		98	0.1417
		100	0.2347
		102	0.2095
		104	0.0462
		106	0.1472
		108	0.0497
		110	0.0161
		112	0.0256
		114	0.0015
2	AHT137	131	0.0687
		133	0.1184
		135	0.0010
		137	0.1124
		141	0.0493
		143	0.4060
		147	0.1861
		151	0.0582
3	AHTH130	119	0.3248
		121	0.2130
		127	0.2311
		129	0.0851
		131	0.0322
		133	0.0005
		137	0.1128
		141	0.0005
4	AHTh171-A	219	0.0226
		225	0.0498
		227	0.3028
		233	0.0005
		235	0.0086
		237	0.6117
		241	0.0040
5	AHTh260	238	0.0045
		240	0.3325
		242	0.0005
		244	0.0627
		246	0.2222
		248	0.0015
		250	0.0848
		252	0.0171
		254	0.2738
		256	0.0005
6	AHTk211	87	0.5962
		89	0.0227
		91	0.1641
		95	0.2170
7	AHTk253	286	0.1960
		288	0.5533
		290	0.0643
		292	0.1864
8	C22.279	116	0.0654
		118	0.0101
		124	0.9220
		126	0.0010
		128	0.0015
9	FH2001	132	0.1589
		136	0.0106
		140	0.0020
		144	0.0827
		148	0.7149
		152	0.0308
10	FH2054	152	0.0005
		156	0.0303
		160	0.1241
		164	0.0817
		168	0.2674
		172	0.3224
		176	0.1544
		180	0.0166
		184	0.0025
11	FH2848	228	0.0319
		232	0.0194
		234	0.0035
		236	0.0393
		238	0.1982
		240	0.6429
		242	0.0010
		244	0.0637
12	INRA21	95	0.5514
		97	0.1334
		99	0.0060
		101	0.3092
13	INU005	106	0.0166
		120	0.0086
		122	0.0020
		124	0.4648
		126	0.4048
		128	0.0005
		130	0.0997
		132	0.0030
14	INU030	144	0.1429
		148	0.0055
		150	0.8400
		152	0.0116
15	INU055	204	0.0739
		210	0.3038
		214	0.3959
		218	0.2259
		222	0.0005
16	LEI004	95	0.6114
		103	0.0020
		107	0.3800
		109	0.0005
		111	0.0035
		113	0.0025
17	REN105L03	227	0.0473
		229	0.0010
		231	0.2229
		233	0.5408
		239	0.0005
		241	0.1876
18	REN162C04	202	0.2377
		204	0.0302
		206	0.7321
19	REN169D01	202	0.1100
		210	0.1577
		212	0.0239
		214	0.0010
		216	0.3920
		218	0.0005
		220	0.3149
20	REN169O18	162	0.2602
		164	0.0915
		166	0.0199
		168	0.4025
		170	0.2259
21	REN247M23	266	0.0015
		268	0.3144
		270	0.2408
		272	0.1577
		274	0.2448
		276	0.0408
22	REN54P11	222	0.1620
		226	0.0131
		228	0.0428
		232	0.3410
		234	0.0246
		238	0.4165
23	REN64E19	139	0.0241
		143	0.4532
		145	0.2777
		147	0.1982
		149	0.0468
24	VGL0760	19.2	0.0035
		20.2	0.2022
		21.2	0.4940
		22.2	0.1177
		23.2	0.1700
		24.2	0.0116
		25.2	0.0010
25	VGL0910	13	0.0724
		14	0.0211
		15	0.0211
		16.1	0.0899
		17.1	0.3980
		18.1	0.0558
		19.1	0.2533
		20.1	0.0648
		20.2	0.0010
		21.1	0.0226
26	VGL1063	8	0.1116
		11	0.0035
		12	0.0015
		13	0.2638
		14	0.3734
		15	0.0211
		17	0.0065
		18	0.0673
		19	0.1482
		20	0.0030
27	VGL1165	18	0.0231
		19	0.3296
		20	0.0372
		21	0.0131
		22	0.0010
		23	0.1221
		24	0.0563
		25	0.1618
		26	0.0025
		27	0.0020
		28	0.0020
		29	0.1915
		30	0.0548
		31	0.0030
28	VGL1828	14	0.0075
		15	0.0820
		16	0.0684
		17	0.0991
		18	0.3058
		19	0.3732
		20	0.0252
		21	0.0382
		22	0.0005
29	VGL2009	9	0.1121
		10	0.2342
		11	0.1533
		13	0.4171
		14	0.0749
		15	0.0070
		16	0.0015
30	VGL2409	13	0.0518
		14	0.0005
		15	0.0241
		16	0.0166
		17	0.1372
		18	0.4774
		19	0.2864
		20	0.0060
31	VGL2918	7	0.0136
		12	0.0659
		13	0.1705
		13.2	0.0065
		14	0.1766
		15	0.0674
		16	0.0010
		17.3	0.0116
		18.3	0.2294
		19.3	0.0463
		20.3	0.1087
		21.3	0.0835
		22.3	0.0091
		23.3	0.0091
		24.3	0.0010
32	VGL3008	15	0.1548
		16	0.1065
		17	0.1920
		18	0.2734
		19	0.2538
		20	0.0161
		21	0.0035
33	VGL3235	13	0.0005
		14	0.2988
		15	0.1298
		16	0.0075
		17	0.3717
		18	0.1715
		19	0.0191
		20	0.0005
		21	0.0005

Standard genetic assessment based on 33 autosomal STR loci

		N	Na	Ne	Ho	He	F
Italian Greyhound	Mean	1006	7.303	3.363	0.613	0.650	0.059
	SE		0.472	0.224	0.026	0.027	0.005

Standard genetic assessment based on 7 STRs in the DLA region

		N	Na	Ne	Ho	He	F
Italian Greyhound	Mean	1006	6.714	3.341	0.647	0.688	0.058
	SE		0.661	0.252	0.021	0.026	0.006

Standard genetic assessment for individual STR loci

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	1006	11	6.161	0.800	0.838	0.045
2	AHT137	1006	8	4.226	0.710	0.763	0.069
3	AHTH130	1006	8	4.439	0.756	0.775	0.024
4	AHTh171-A	1006	7	2.133	0.485	0.531	0.087
5	AHTh260	1006	10	4.060	0.682	0.754	0.095
6	AHTk211	1006	4	2.326	0.532	0.570	0.067
7	AHTk253	1006	4	2.608	0.580	0.617	0.060
8	C22.279	1006	5	1.170	0.128	0.145	0.122
9	FH2001	1006	6	1.837	0.433	0.456	0.050
10	FH2054	1006	9	4.493	0.738	0.777	0.051
11	FH2848	1006	8	2.176	0.516	0.540	0.045
12	INRA21	1006	4	2.396	0.550	0.583	0.056
13	INU005	1006	8	2.563	0.602	0.610	0.012
14	INU030	1006	4	1.377	0.259	0.274	0.056
15	INU055	1006	5	3.273	0.607	0.694	0.127
16	LEI004	1006	6	1.930	0.490	0.482	-0.017
17	REN105L03	1006	6	2.635	0.581	0.620	0.063
18	REN162C04	1006	3	1.685	0.380	0.407	0.066
19	REN169D01	1006	7	3.443	0.663	0.710	0.066
20	REN169O18	1006	5	3.454	0.649	0.711	0.087
21	REN247M23	1006	6	4.110	0.727	0.757	0.039
22	REN54P11	1006	6	3.138	0.648	0.681	0.049
23	REN64E19	1006	5	3.081	0.666	0.675	0.014
24	VGL0760	1006	7	3.051	0.608	0.672	0.096
25	VGL0910	1006	10	4.089	0.734	0.755	0.029
26	VGL1063	1006	10	4.025	0.727	0.752	0.033
27	VGL1165	1006	14	5.136	0.781	0.805	0.030
28	VGL1828	1006	9	3.903	0.680	0.744	0.086
29	VGL2009	1006	7	3.697	0.675	0.729	0.074
30	VGL2409	1006	8	3.009	0.623	0.668	0.067
31	VGL2918	1006	15	6.983	0.801	0.857	0.065
32	VGL3008	1006	7	4.727	0.747	0.788	0.053
33	VGL3235	1006	9	3.648	0.658	0.726	0.094

Standard genetic assessment for 7 STRs in the DLA region

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	1006	8	4.427	0.720	0.774	0.070
2	DLA I-4ACA	1006	9	3.497	0.681	0.714	0.046
3	DLA I-4BCT	1006	5	3.153	0.637	0.683	0.067
4	DLA1131	1006	9	3.907	0.681	0.744	0.084
5	5ACA	1006	6	3.404	0.664	0.706	0.060
6	5ACT	1006	5	2.758	0.609	0.637	0.044
7	5BCA	1006	5	2.242	0.535	0.554	0.035

Veterinary Genetics Laboratory

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Statistics and Breed-wide Allele Frequency - Italian Greyhound

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Italian Greyhound

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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