Updated Jul 26, 2024
DLA Class I Haplotype Frequencies
DLA1 # | STR types | Italian Greyhound (n=1483) |
---|---|---|
1008 | 386 373 289 182 | 0.1183 |
1012 | 388 369 289 188 | 0.0084 |
1016 | 382 371 277 178 | 0.0627 |
1030 | 380 373 293 178 | 0.0307 |
1036 | 389 365 289 180 | 0.0010 |
1040 | 380 371 277 186 | 0.0775 |
1044 | 375 373 291 178 | 0.2525 |
1048 | 380 370 289 184 | 0.0111 |
1049 | 380 370 289 186 | 0.0007 |
1050 | 380 371 289 182 | 0.0007 |
1051 | 380 371 289 184 | 0.0013 |
1052 | 380 372 289 184 | 0.1861 |
1053 | 382 377 277 186 | 0.1140 |
1054 | 382 379 277 184 | 0.0152 |
1055 | 386 373 289 180 | 0.0003 |
1056 | 386 373 289 190 | 0.0047 |
1058 | 387 378 287 186 | 0.0057 |
1059 | 390 371 291 182 | 0.1032 |
1065 | 380 371 277 181 | 0.0003 |
1104 | 386 373 289 186 | 0.0024 |
1228 | 390 373 289 176 | 0.0013 |
1235 | 388 369 289 190 | 0.0007 |
1269 | 375 373 277 186 | 0.0007 |
1272 | 386 373 291 178 | 0.0003 |
DLA Class II Haplotype Frequencies
DLA2 # | STR types | Italian Greyhound (n=1483) |
---|---|---|
2003 | 343 324 282 | 0.0078 |
2014 | 339 322 284 | 0.0013 |
2015 | 339 327 280 | 0.0101 |
2017 | 343 322 280 | 0.2111 |
2023 | 341 323 282 | 0.0307 |
2029 | 337 324 268 | 0.1032 |
2030 | 339 322 268 | 0.0003 |
2031 | 339 322 282 | 0.0624 |
2032 | 339 323 280 | 0.0341 |
2033 | 339 323 282 | 0.0047 |
2034 | 341 322 280 | 0.2525 |
2035 | 341 323 280 | 0.0856 |
2036 | 341 327 276 | 0.0958 |
2037 | 341 327 280 | 0.0084 |
2038 | 345 324 280 | 0.0067 |
2039 | 345 327 276 | 0.0806 |
2040 | 345 327 280 | 0.0010 |
2041 | 349 321 280 | 0.0010 |
2044 | 343 324 268 | 0.0003 |
2067 | 343 322 284 | 0.0003 |
2081 | 343 322 282 | 0.0007 |
2102 | 341 327 268 | 0.0010 |
2132 | 341 322 282 | 0.0003 |
Allele Frequencies
# | Locus Name | Allele | Italian Greyhound (n=1487) |
---|---|---|---|
1 | AHT121 | 94 | 0.0007 |
96 | 0.1223 | ||
98 | 0.1445 | ||
100 | 0.2322 | ||
102 | 0.2070 | ||
104 | 0.0484 | ||
106 | 0.1458 | ||
108 | 0.0628 | ||
110 | 0.0121 | ||
112 | 0.0228 | ||
114 | 0.0010 | ||
116 | 0.0003 | ||
2 | AHT137 | 131 | 0.0676 |
133 | 0.1302 | ||
135 | 0.0007 | ||
137 | 0.1090 | ||
141 | 0.0394 | ||
143 | 0.3974 | ||
147 | 0.1955 | ||
149 | 0.0007 | ||
151 | 0.0596 | ||
3 | AHTH130 | 119 | 0.3295 |
121 | 0.2046 | ||
123 | 0.0007 | ||
127 | 0.2292 | ||
129 | 0.0918 | ||
131 | 0.0324 | ||
133 | 0.0003 | ||
137 | 0.1111 | ||
141 | 0.0003 | ||
4 | AHTh171-A | 219 | 0.0232 |
225 | 0.0531 | ||
227 | 0.3080 | ||
229 | 0.0003 | ||
233 | 0.0003 | ||
235 | 0.0074 | ||
237 | 0.6019 | ||
241 | 0.0057 | ||
5 | AHTh260 | 238 | 0.0037 |
240 | 0.3455 | ||
242 | 0.0003 | ||
244 | 0.0657 | ||
246 | 0.2182 | ||
248 | 0.0010 | ||
250 | 0.0660 | ||
252 | 0.0141 | ||
254 | 0.2848 | ||
256 | 0.0003 | ||
260 | 0.0003 | ||
6 | AHTk211 | 87 | 0.6100 |
89 | 0.0222 | ||
91 | 0.1595 | ||
95 | 0.2083 | ||
7 | AHTk253 | 286 | 0.1969 |
288 | 0.5501 | ||
290 | 0.0632 | ||
292 | 0.1899 | ||
8 | C22.279 | 116 | 0.0619 |
118 | 0.0087 | ||
124 | 0.9270 | ||
126 | 0.0013 | ||
128 | 0.0010 | ||
9 | FH2001 | 132 | 0.1546 |
136 | 0.0084 | ||
140 | 0.0017 | ||
144 | 0.0866 | ||
148 | 0.7193 | ||
152 | 0.0286 | ||
156 | 0.0007 | ||
10 | FH2054 | 152 | 0.0003 |
156 | 0.0350 | ||
160 | 0.1297 | ||
164 | 0.0788 | ||
168 | 0.2753 | ||
172 | 0.3157 | ||
176 | 0.1482 | ||
180 | 0.0152 | ||
184 | 0.0017 | ||
11 | FH2848 | 228 | 0.0327 |
232 | 0.0168 | ||
234 | 0.0037 | ||
236 | 0.0424 | ||
238 | 0.2030 | ||
240 | 0.6458 | ||
242 | 0.0010 | ||
244 | 0.0545 | ||
12 | INRA21 | 95 | 0.5410 |
97 | 0.1410 | ||
99 | 0.0054 | ||
101 | 0.3126 | ||
13 | INU005 | 106 | 0.0141 |
120 | 0.0077 | ||
122 | 0.0013 | ||
124 | 0.4633 | ||
126 | 0.4078 | ||
128 | 0.0003 | ||
130 | 0.1013 | ||
132 | 0.0040 | ||
14 | INU030 | 144 | 0.1318 |
148 | 0.0047 | ||
150 | 0.8547 | ||
152 | 0.0087 | ||
15 | INU055 | 204 | 0.0723 |
210 | 0.3046 | ||
214 | 0.3897 | ||
218 | 0.2330 | ||
222 | 0.0003 | ||
16 | LEI004 | 95 | 0.5987 |
103 | 0.0013 | ||
107 | 0.3916 | ||
109 | 0.0017 | ||
111 | 0.0027 | ||
113 | 0.0040 | ||
17 | REN105L03 | 227 | 0.0431 |
229 | 0.0007 | ||
231 | 0.2207 | ||
233 | 0.5474 | ||
239 | 0.0003 | ||
241 | 0.1878 | ||
18 | REN162C04 | 202 | 0.2480 |
204 | 0.0340 | ||
206 | 0.7180 | ||
19 | REN169D01 | 202 | 0.1036 |
210 | 0.1534 | ||
212 | 0.0195 | ||
214 | 0.0007 | ||
216 | 0.4135 | ||
218 | 0.0003 | ||
220 | 0.3089 | ||
20 | REN169O18 | 162 | 0.2426 |
164 | 0.0831 | ||
166 | 0.0192 | ||
168 | 0.4293 | ||
170 | 0.2258 | ||
21 | REN247M23 | 266 | 0.0017 |
268 | 0.3092 | ||
270 | 0.2234 | ||
272 | 0.1649 | ||
274 | 0.2695 | ||
276 | 0.0313 | ||
22 | REN54P11 | 222 | 0.1594 |
226 | 0.0131 | ||
228 | 0.0367 | ||
232 | 0.3342 | ||
234 | 0.0219 | ||
236 | 0.0003 | ||
238 | 0.4344 | ||
23 | REN64E19 | 139 | 0.0208 |
143 | 0.4499 | ||
145 | 0.2895 | ||
147 | 0.1967 | ||
149 | 0.0424 | ||
153 | 0.0007 | ||
24 | VGL0760 | 19.2 | 0.0027 |
20.2 | 0.1933 | ||
21.2 | 0.5057 | ||
22.2 | 0.1247 | ||
23.2 | 0.1631 | ||
24.2 | 0.0098 | ||
25.2 | 0.0007 | ||
25 | VGL0910 | 13 | 0.0682 |
14 | 0.0215 | ||
15 | 0.0188 | ||
16.1 | 0.1106 | ||
17.1 | 0.3841 | ||
18.1 | 0.0625 | ||
19.1 | 0.2450 | ||
20.1 | 0.0649 | ||
20.2 | 0.0007 | ||
21.1 | 0.0235 | ||
22.1 | 0.0003 | ||
26 | VGL1063 | 8 | 0.1142 |
11 | 0.0044 | ||
12 | 0.0010 | ||
13 | 0.2507 | ||
14 | 0.3790 | ||
15 | 0.0192 | ||
17 | 0.0060 | ||
18 | 0.0638 | ||
19 | 0.1586 | ||
20 | 0.0030 | ||
27 | VGL1165 | 18 | 0.0212 |
19 | 0.3330 | ||
20 | 0.0373 | ||
21 | 0.0124 | ||
22 | 0.0007 | ||
23 | 0.1341 | ||
24 | 0.0517 | ||
25 | 0.1707 | ||
26 | 0.0024 | ||
27 | 0.0020 | ||
28 | 0.0013 | ||
29 | 0.1761 | ||
30 | 0.0541 | ||
31 | 0.0030 | ||
28 | VGL1828 | 14 | 0.0067 |
15 | 0.0810 | ||
16 | 0.0649 | ||
17 | 0.1002 | ||
18 | 0.3299 | ||
19 | 0.3588 | ||
20 | 0.0229 | ||
21 | 0.0353 | ||
22 | 0.0003 | ||
29 | VGL2009 | 9 | 0.1055 |
10 | 0.2631 | ||
11 | 0.1569 | ||
13 | 0.3942 | ||
14 | 0.0736 | ||
15 | 0.0054 | ||
16 | 0.0013 | ||
30 | VGL2409 | 13 | 0.0464 |
14 | 0.0010 | ||
15 | 0.0282 | ||
16 | 0.0134 | ||
17 | 0.1428 | ||
18 | 0.4805 | ||
19 | 0.2816 | ||
20 | 0.0060 | ||
31 | VGL2918 | 7 | 0.0124 |
12 | 0.0639 | ||
13 | 0.1624 | ||
13.2 | 0.0044 | ||
13.3 | 0.0003 | ||
14 | 0.2044 | ||
15 | 0.0652 | ||
16 | 0.0013 | ||
17.3 | 0.0091 | ||
18.3 | 0.2263 | ||
19.3 | 0.0491 | ||
20.3 | 0.1056 | ||
21.3 | 0.0746 | ||
22.3 | 0.0101 | ||
23.3 | 0.0098 | ||
24.3 | 0.0010 | ||
32 | VGL3008 | 15 | 0.1599 |
16 | 0.1048 | ||
17 | 0.1815 | ||
18 | 0.2772 | ||
19 | 0.2534 | ||
20 | 0.0192 | ||
21 | 0.0040 | ||
33 | VGL3235 | 13 | 0.0007 |
14 | 0.2757 | ||
15 | 0.1311 | ||
16 | 0.0071 | ||
17 | 0.3826 | ||
18 | 0.1859 | ||
19 | 0.0158 | ||
20 | 0.0007 | ||
21 | 0.0003 |
Standard genetic assessment based on 33 autosomal STR loci
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 1487 | 7.606 | 3.344 | 0.612 | 0.648 | 0.057 | |
SE | 0.503 | 0.222 | 0.026 | 0.027 | 0.005 |
Standard genetic assessment based on 7 STRs in the DLA region
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 1487 | 6.714 | 3.374 | 0.662 | 0.692 | 0.041 | |
SE | 0.661 | 0.248 | 0.020 | 0.024 | 0.006 |
Standard genetic assessment for individual STR loci
Italian Greyhound
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | AHT121 | 1487 | 12 | 6.218 | 0.798 | 0.839 | 0.049 |
2 | AHT137 | 1487 | 9 | 4.262 | 0.717 | 0.765 | 0.063 |
3 | AHTH130 | 1487 | 9 | 4.448 | 0.761 | 0.775 | 0.018 |
4 | AHTh171-A | 1487 | 8 | 2.171 | 0.491 | 0.539 | 0.090 |
5 | AHTh260 | 1487 | 11 | 3.892 | 0.681 | 0.743 | 0.084 |
6 | AHTk211 | 1487 | 4 | 2.265 | 0.519 | 0.559 | 0.071 |
7 | AHTk253 | 1487 | 4 | 2.622 | 0.582 | 0.619 | 0.059 |
8 | C22.279 | 1487 | 5 | 1.158 | 0.122 | 0.137 | 0.110 |
9 | FH2001 | 1487 | 7 | 1.819 | 0.431 | 0.450 | 0.044 |
10 | FH2054 | 1487 | 9 | 4.506 | 0.746 | 0.778 | 0.041 |
11 | FH2848 | 1487 | 8 | 2.153 | 0.513 | 0.536 | 0.042 |
12 | INRA21 | 1487 | 4 | 2.437 | 0.562 | 0.590 | 0.047 |
13 | INU005 | 1487 | 8 | 2.554 | 0.593 | 0.608 | 0.026 |
14 | INU030 | 1487 | 4 | 1.337 | 0.239 | 0.252 | 0.050 |
15 | INU055 | 1487 | 5 | 3.287 | 0.633 | 0.696 | 0.090 |
16 | LEI004 | 1487 | 6 | 1.954 | 0.504 | 0.488 | -0.033 |
17 | REN105L03 | 1487 | 6 | 2.594 | 0.587 | 0.614 | 0.045 |
18 | REN162C04 | 1487 | 3 | 1.729 | 0.390 | 0.422 | 0.076 |
19 | REN169D01 | 1487 | 7 | 3.321 | 0.646 | 0.699 | 0.076 |
20 | REN169O18 | 1487 | 5 | 3.317 | 0.631 | 0.699 | 0.097 |
21 | REN247M23 | 1487 | 6 | 4.059 | 0.709 | 0.754 | 0.059 |
22 | REN54P11 | 1487 | 7 | 3.050 | 0.652 | 0.672 | 0.030 |
23 | REN64E19 | 1487 | 6 | 3.057 | 0.663 | 0.673 | 0.015 |
24 | VGL0760 | 1487 | 7 | 2.982 | 0.597 | 0.665 | 0.101 |
25 | VGL0910 | 1487 | 11 | 4.276 | 0.755 | 0.766 | 0.015 |
26 | VGL1063 | 1487 | 10 | 4.013 | 0.731 | 0.751 | 0.027 |
27 | VGL1165 | 1487 | 14 | 5.086 | 0.778 | 0.803 | 0.031 |
28 | VGL1828 | 1487 | 9 | 3.844 | 0.668 | 0.740 | 0.097 |
29 | VGL2009 | 1487 | 7 | 3.762 | 0.679 | 0.734 | 0.075 |
30 | VGL2409 | 1487 | 8 | 2.996 | 0.616 | 0.666 | 0.075 |
31 | VGL2918 | 1487 | 16 | 6.789 | 0.810 | 0.853 | 0.050 |
32 | VGL3008 | 1487 | 7 | 4.741 | 0.751 | 0.789 | 0.048 |
33 | VGL3235 | 1487 | 9 | 3.643 | 0.653 | 0.725 | 0.100 |
Standard genetic assessment for 7 STRs in the DLA region
Italian Greyhound
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | DLA I-3CCA | 1487 | 8 | 4.485 | 0.727 | 0.777 | 0.064 |
2 | DLA I-4ACA | 1487 | 9 | 3.603 | 0.697 | 0.722 | 0.035 |
3 | DLA I-4BCT | 1487 | 5 | 3.180 | 0.657 | 0.685 | 0.042 |
4 | DLA1131 | 1487 | 9 | 3.918 | 0.700 | 0.745 | 0.061 |
5 | 5ACA | 1487 | 6 | 3.282 | 0.671 | 0.695 | 0.035 |
6 | 5ACT | 1487 | 5 | 2.804 | 0.623 | 0.643 | 0.032 |
7 | 5BCA | 1487 | 5 | 2.345 | 0.561 | 0.573 | 0.021 |