Statistics and Breed-wide Allele Frequency - Labrador Retriever

Updated Jun 13, 2021

DLA Class I Haplotype Frequencies

DLA1 #STR typesLabrador Retriever (n=207)
1003387 375 277 1860.002
1006387 375 293 1800.036
1008386 373 289 1820.077
1016382 371 277 1780.010
1017386 373 289 1780.031
1030380 373 293 1780.051
1033382 379 277 1810.002
1034382 379 277 1820.005
1045376 371 277 1860.007
1046376 379 291 1800.002
1054382 379 277 1840.072
1062382 371 277 1830.017
1063382 373 289 1820.002
1065380 371 277 1810.370
1066376 375 277 1780.002
1068380 373 287 1810.041
1070380 375 291 1780.005
1105382 379 277 1780.048
1134384 365 291 1780.010
1142376 379 277 1800.002
1165392 369 281 1820.191
1175380 375 293 1800.002
1176382 373 289 1780.002
1180386 371 277 1810.002
1189382 379 289 1820.002
1226380 373 277 1810.002
1243387 375 277 1800.002

DLA Class II Haplotype Frequencies

DLA2 #STR typesLabrador Retriever (n=207)
2001343 324 2840.002
2003343 324 2820.014
2005339 322 2800.051
2007351 327 2800.041
2014339 322 2840.002
2021339 324 2680.017
2022339 327 2820.072
2023341 323 2820.051
2024343 323 2800.046
2031339 322 2820.007
2039345 327 2760.007
2046339 329 2800.002
2048339 331 2820.370
2049339 331 2840.002
2052345 321 2800.070
2053343 324 2800.039
2080339 325 2760.196
2083339 324 2820.002
2098343 323 2820.002
2127339 331 2760.005

Allele Frequencies

#Locus NameAlleleLabrador Retriever (n=207)
1AHT121 960.041
980.014
1020.558
1040.053
1060.309
1080.014
1100.007
1120.002
2AHT137 1310.075
1330.203
1370.024
1390.036
1410.126
1430.002
1470.060
1490.389
1510.002
1530.082
3AHTH130 1190.109
1210.184
1230.140
1250.043
1270.278
1290.246
4AHTh171-A 2190.022
2230.401
2250.167
2270.140
2330.031
2350.179
2370.060
5AHTh260 2380.034
2400.130
2420.005
2440.118
2460.442
2480.111
2500.029
2520.046
2540.082
2560.002
6AHTk211 870.075
890.019
910.150
930.007
950.505
970.244
7AHTk253 2840.174
2860.072
2880.529
2900.147
2920.077
8C22.279 1140.002
1160.174
1180.106
1240.379
1260.041
1300.297
9FH2001 1320.075
1360.017
1400.007
1440.140
1480.633
1520.022
1580.104
1620.002
10FH2054 1480.116
1520.287
1560.333
1600.034
1640.041
1680.159
1720.027
1760.002
11FH2848 2320.353
2360.002
2380.196
2400.191
2420.014
2440.244
12INRA21 910.010
950.309
970.121
990.005
1010.522
1030.034
13INU005 1060.002
1100.065
1200.005
1240.519
1260.374
1320.034
14INU030 1440.575
1460.012
1500.280
1520.128
1540.005
15INU055 2080.089
2100.111
2120.203
2140.002
2160.031
2180.432
2200.130
16LEI004 850.447
950.222
970.007
1010.002
1050.007
1070.309
1110.005
17REN105L03 2290.002
2310.065
2330.077
2350.659
2370.143
2410.031
2450.022
18REN162C04 2000.145
2020.510
2040.056
2060.186
2080.053
2100.048
2120.002
19REN169D01 1920.007
2020.174
2100.041
2120.229
2140.314
2160.191
2180.010
2200.005
2240.029
20REN169O18 1580.002
1620.092
1640.140
1660.036
1680.527
1700.203
21REN247M23 2680.703
2700.005
2720.273
2760.014
2780.005
22REN54P11 2220.140
2260.406
2280.002
2300.002
2320.343
2340.041
2360.019
2380.024
2440.022
23REN64E19 1390.085
1430.002
1450.140
1470.111
1490.268
1530.391
1550.002
24VGL0760 18.20.029
19.20.111
20.20.249
21.20.454
22.20.089
23.20.065
24.20.002
25VGL0910 15.10.005
16.10.036
17.10.268
18.10.121
19.10.111
20.10.302
21.10.150
22.10.007
26VGL1063 80.056
130.106
140.331
150.085
160.002
170.205
180.104
190.094
200.014
210.002
27VGL1165 160.002
170.002
180.002
200.121
210.420
220.024
250.012
260.065
270.220
280.123
290.005
320.002
28VGL1828 150.118
160.251
170.101
180.027
190.345
200.043
210.005
220.109
29VGL2009 100.007
110.208
120.053
130.428
140.169
150.123
160.012
30VGL2409 130.089
140.147
150.024
160.065
170.500
180.174
31VGL2918 110.002
120.350
130.087
140.085
150.043
160.007
17.30.017
18.30.164
19.30.229
20.30.010
22.30.005
32VGL3008 140.101
150.140
160.010
170.118
180.162
190.304
200.056
210.106
220.002
33VGL3235 120.072
130.007
140.082
150.287
160.444
170.043
180.053
190.010

Standard genetic assessment based on 33 autosomal STR loci

Labrador Retriever

  NNaNeHoHeF
Mean2077.4853.5510.6500.6960.067
 SE 0.3000.1630.0170.0150.010

Standard genetic assessment based on 7 STRs in the DLA region

Labrador Retriever

  NNaNeHoHeF
Mean2076.2863.2110.6830.664-0.024
 SE 0.3890.3090.0430.0380.009

Standard genetic assessment for individual STR loci

Labrador Retriever

#LocusNNaNeHoHeF
1AHT12120782.4280.5750.5880.022
2AHT137207104.4230.7150.7740.076
3AHTH13020764.8810.7580.7950.046
4AHTh171-A20774.0780.6910.7550.085
5AHTh260207104.0060.7200.7500.041
6AHTk21120762.9170.5410.6570.177
7AHTk25320752.9150.5890.6570.103
8C22.27920763.6320.6860.7250.053
9FH200120782.2870.5220.5630.073
10FH205420784.2350.7050.7640.077
11FH284820763.8640.7250.7410.022
12INRA2120762.6070.6860.616-0.113
13INU00520762.4080.5170.5850.116
14INU03020752.3500.5510.5740.041
15INU05520773.7530.6470.7340.118
16LEI00420772.9000.6090.6550.071
17REN105L0320772.1420.4880.5330.085
18REN162C0420773.0900.5460.6760.193
19REN169D0120794.5330.7250.7790.070
20REN169O1820762.8750.5700.6520.126
21REN247M2320751.7580.3820.4310.115
22REN54P1120793.2780.6430.6950.075
23REN64E1920773.7860.7050.7360.042
24VGL076020773.4070.7100.706-0.005
25VGL091020784.6770.7490.7860.048
26VGL1063207105.1790.7780.8070.036
27VGL1165207123.8500.6280.7400.152
28VGL182820784.5220.7730.7790.008
29VGL200920773.6670.6380.7270.123
30VGL240920763.1770.6280.6850.083
31VGL2918207114.5590.7290.7810.066
32VGL300820795.6420.8020.8230.025
33VGL323520783.3670.7250.703-0.031

Standard genetic assessment for 7 STRs in the DLA region

Labrador Retriever

#LocusNNaNeHoHeF
1DLA I-3CCA20773.3470.7200.701-0.027
2DLA I-4ACA20763.7710.7730.735-0.052
3DLA I-4BCT20762.7950.6520.642-0.016
4DLA113120773.5100.7580.715-0.061
55ACA20751.8190.4440.4500.013
65ACT20784.5700.8070.781-0.033
75BCA20752.6660.6230.6250.003