Statistics and Breed-wide Allele Frequency - Labrador Retriever

Updated Aug 9, 2020

DLA Class I Haplotype Frequencies

DLA1 #STR typesLabrador Retriever (n=197)
1003387 375 277 1860.003
1006387 375 293 1800.036
1008386 373 289 1820.069
1016382 371 277 1780.010
1017386 373 289 1780.033
1030380 373 293 1780.048
1033382 379 277 1810.003
1034382 379 277 1820.005
1045376 371 277 1860.008
1046376 379 291 1800.003
1054382 379 277 1840.076
1062382 371 277 1830.018
1063382 373 289 1820.003
1065380 371 277 1810.365
1066376 375 277 1780.003
1068380 373 287 1810.043
1070380 375 291 1780.005
1105382 379 277 1780.051
1134384 365 291 1780.008
1142376 379 277 1800.003
1165392 369 281 1820.195
1175380 375 293 1800.003
1176382 373 289 1780.003
1180386 371 277 1810.003
1189382 379 289 1820.003
1226380 373 277 1810.003
1243387 375 277 1800.003

DLA Class II Haplotype Frequencies

DLA2 #STR typesLabrador Retriever (n=197)
2001343 324 2840.003
2003343 324 2820.015
2005339 322 2800.051
2007351 327 2800.041
2014339 322 2840.003
2021339 324 2680.018
2022339 327 2820.076
2023341 323 2820.048
2024343 323 2800.048
2031339 322 2820.008
2039345 327 2760.008
2046339 329 2800.003
2048339 331 2820.365
2049339 331 2840.003
2052345 321 2800.061
2053343 324 2800.041
2080339 325 2760.201
2083339 324 2820.003
2098343 323 2820.003
2127339 331 2760.005

Allele Frequencies

#Locus NameAlleleLabrador Retriever (n=197)
1AHT121 960.043
980.013
1020.548
1040.051
1060.322
1080.013
1100.008
1120.003
2AHT137 1310.079
1330.203
1370.025
1390.036
1410.127
1430.003
1470.061
1490.381
1510.003
1530.084
3AHTH130 1190.109
1210.175
1230.127
1250.046
1270.287
1290.256
4AHTh171-A 2190.023
2230.393
2250.160
2270.147
2330.030
2350.183
2370.063
5AHTh260 2380.036
2400.137
2420.005
2440.122
2460.434
2480.114
2500.030
2520.043
2540.076
2560.003
6AHTk211 870.079
890.020
910.155
930.005
950.495
970.246
7AHTk253 2840.173
2860.063
2880.533
2900.150
2920.081
8C22.279 1140.003
1160.170
1180.107
1240.386
1260.043
1300.292
9FH2001 1320.076
1360.018
1400.008
1440.137
1480.632
1520.023
1580.104
1620.003
10FH2054 1480.119
1520.289
1560.340
1600.033
1640.043
1680.147
1720.025
1760.003
11FH2848 2320.348
2360.003
2380.195
2400.190
2420.015
2440.249
12INRA21 910.010
950.297
970.127
990.005
1010.528
1030.033
13INU005 1060.003
1100.069
1200.005
1240.530
1260.358
1320.036
14INU030 1440.571
1460.013
1500.284
1520.127
1540.005
15INU055 2080.094
2100.114
2120.211
2140.003
2160.033
2180.419
2200.127
16LEI004 850.444
950.226
970.008
1010.003
1050.008
1070.310
1110.003
17REN105L03 2290.003
2310.066
2330.081
2350.652
2370.142
2410.033
2450.023
18REN162C04 2000.152
2020.495
2040.048
2060.195
2080.056
2100.051
2120.003
19REN169D01 1920.008
2020.175
2100.030
2120.226
2140.317
2160.198
2180.010
2200.005
2240.030
20REN169O18 1580.003
1620.084
1640.145
1660.036
1680.533
1700.201
21REN247M23 2680.708
2700.005
2720.266
2760.015
2780.005
22REN54P11 2220.147
2260.383
2280.003
2300.003
2320.353
2340.043
2360.020
2380.025
2440.023
23REN64E19 1390.089
1430.003
1450.140
1470.109
1490.277
1530.383
24VGL0760 18.20.030
19.20.109
20.20.251
21.20.454
22.20.086
23.20.066
24.20.003
25VGL0910 15.10.005
16.10.036
17.10.259
18.10.124
19.10.114
20.10.305
21.10.150
22.10.008
26VGL1063 80.056
130.102
140.325
150.084
160.003
170.208
180.109
190.096
200.015
210.003
27VGL1165 160.003
180.003
200.127
210.404
220.025
250.013
260.066
270.223
280.129
290.005
320.003
28VGL1828 150.124
160.256
170.091
180.028
190.340
200.043
210.005
220.112
29VGL2009 100.008
110.216
120.043
130.439
140.170
150.112
160.013
30VGL2409 130.094
140.150
150.023
160.069
170.495
180.170
31VGL2918 110.003
120.358
130.089
140.089
150.046
160.008
17.30.018
18.30.162
19.30.213
20.30.010
22.30.005
32VGL3008 140.107
150.147
160.010
170.124
180.147
190.302
200.056
210.104
220.003
33VGL3235 120.066
130.005
140.084
150.289
160.452
170.046
180.048
190.010

Standard genetic assessment based on 33 autosomal STR loci

  NNaNeHoHeF
Labrador RetrieverMean1977.4243.5690.6510.6970.067
 SE 0.2910.1640.0160.0150.010

Standard genetic assessment based on 7 STRs in the DLA region

  NNaNeHoHeF
Labrador RetrieverMean1976.2863.2130.6760.663-0.015
 SE 0.3890.3150.0450.0390.011

Standard genetic assessment for individual STR loci

#LocusNNaNeHoHeF
1AHT12119782.4430.5940.591-0.005
2AHT137197104.5230.7110.7790.088
3AHTH13019764.7910.7560.7910.044
4AHTh171-A19774.1520.6900.7590.091
5AHTh260197104.0830.7260.7550.039
6AHTk21119762.9750.5430.6640.182
7AHTk25319752.8830.5740.6530.122
8C22.27919763.6210.6900.7240.046
9FH200119782.2950.5180.5640.082
10FH205419784.1860.7060.7610.073
11FH284819763.8840.7210.7430.029
12INRA2119762.6030.6850.616-0.113
13INU00519762.4070.5330.5850.088
14INU03019752.3630.5430.5770.058
15INU05519773.8640.6550.7410.117
16LEI00419772.9040.5990.6560.086
17REN105L0319772.1820.4920.5420.091
18REN162C0419773.1810.5530.6860.193
19REN169D0119794.4730.7310.7760.059
20REN169O1819762.8290.5690.6460.121
21REN247M2319751.7460.3910.4270.085
22REN54P1119793.3730.6600.7040.062
23REN64E1919763.8060.7060.7370.043
24VGL076019773.3990.7010.7060.008
25VGL091019784.7160.7460.7880.053
26VGL1063197105.2420.7770.8090.040
27VGL1165197113.9870.6500.7490.133
28VGL182819784.5390.7610.7800.023
29VGL200919773.5360.6240.7170.129
30VGL240919763.2220.6240.6900.095
31VGL2918197114.5810.7360.7820.058
32VGL300819795.7000.8070.8250.021
33VGL323519783.2920.7160.696-0.028

Standard genetic assessment for 7 STRs in the DLA region

#LocusNNaNeHoHeF
1DLA I-3CCA19773.3560.7210.702-0.027
2DLA I-4ACA19763.7870.7660.736-0.042
3DLA I-4BCT19762.7550.6400.637-0.004
4DLA113119773.5430.7560.718-0.054
55ACA19751.7900.4260.4410.034
65ACT19784.5810.8020.782-0.026
75BCA19752.6790.6190.6270.012