Statistics and Breed-wide Allele Frequency - Samoyed

Updated Aug 15, 2025

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Samoyed (n=196)
1006	387 375 293 180	0.005
1009	382 377 277 184	0.128
1011	376 365 281 180	0.270
1012	388 369 289 188	0.018
1014	375 373 287 178	0.003
1061	380 365 281 183	0.003
1068	380 373 287 181	0.041
1085	376 373 277 186	0.003
1152	390 373 281 180	0.492
1153	389 373 287 183	0.018
1157	386 373 281 180	0.003
1158	390 371 281 180	0.003
1160	386 369 289 176	0.015

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Samoyed (n=196)
2002	343 327 280	0.003
2003	343 324 282	0.018
2007	351 327 280	0.005
2015	339 327 280	0.015
2022	339 327 282	0.112
2024	343 323 280	0.015
2042	341 324 286	0.003
2050	341 327 284	0.003
2053	343 324 280	0.554
2095	355 322 280	0.161
2096	351 322 280	0.110
2099	345 324 276	0.003

Allele Frequencies

#	Locus Name	Allele	Samoyed (n=199)
1	AHT121	94	0.279
		96	0.025
		100	0.116
		102	0.327
		106	0.040
		108	0.116
		112	0.033
		114	0.003
		116	0.063
2	AHT137	131	0.053
		133	0.183
		145	0.015
		147	0.231
		151	0.259
		153	0.256
		155	0.003
3	AHTH130	119	0.193
		121	0.673
		127	0.013
		129	0.121
4	AHTh171-A	219	0.432
		225	0.063
		227	0.131
		229	0.219
		235	0.156
5	AHTh260	236	0.168
		238	0.005
		242	0.211
		246	0.362
		249	0.005
		250	0.116
		252	0.133
6	AHTk211	89	0.339
		91	0.606
		93	0.055
7	AHTk253	284	0.030
		286	0.118
		288	0.148
		290	0.344
		292	0.357
		294	0.003
8	C22.279	116	0.296
		118	0.121
		120	0.073
		122	0.050
		124	0.389
		126	0.005
		134	0.065
9	FH2001	16	0.003
		132	0.018
		136	0.101
		140	0.028
		144	0.510
		148	0.008
		152	0.085
		156	0.249
10	FH2054	148	0.010
		152	0.003
		156	0.005
		160	0.005
		168	0.626
		172	0.148
		176	0.176
		180	0.028
11	FH2848	232	0.003
		234	0.274
		236	0.216
		237	0.003
		238	0.392
		239	0.003
		240	0.070
		244	0.040
12	INRA21	95	0.942
		97	0.043
		101	0.015
13	INU005	110	0.156
		122	0.435
		124	0.332
		126	0.025
		132	0.053
14	INU030	144	0.188
		146	0.008
		148	0.545
		150	0.259
15	INU055	210	0.005
		212	0.005
		214	0.131
		216	0.176
		218	0.683
16	LEI004	85	0.251
		95	0.746
		107	0.003
17	REN105L03	227	0.101
		229	0.181
		231	0.093
		233	0.028
		234	0.003
		235	0.003
		236	0.003
		239	0.055
		241	0.520
		245	0.015
18	REN162C04	200	0.030
		202	0.181
		204	0.598
		206	0.128
		210	0.063
19	REN169D01	202	0.442
		208	0.038
		212	0.113
		216	0.138
		220	0.055
		222	0.008
		224	0.201
		226	0.005
20	REN169O18	162	0.101
		164	0.216
		166	0.553
		168	0.118
		170	0.013
21	REN247M23	266	0.090
		268	0.359
		270	0.221
		272	0.304
		274	0.005
		276	0.003
		278	0.018
22	REN54P11	226	0.131
		232	0.578
		234	0.266
		236	0.023
		238	0.003
23	REN64E19	139	0.450
		143	0.332
		145	0.111
		147	0.108
24	VGL0760	12	0.128
		13	0.181
		14	0.098
		18.2	0.229
		19.2	0.020
		20.2	0.068
		21.2	0.221
		22.2	0.053
		26.2	0.003
25	VGL0910	17.1	0.236
		18.1	0.068
		19.1	0.020
		20.1	0.055
		21.1	0.319
		22.1	0.178
		23.1	0.060
		24.1	0.063
26	VGL1063	9	0.005
		11	0.005
		12	0.593
		13	0.013
		14	0.068
		17	0.289
		18	0.028
27	VGL1165	14	0.178
		15	0.131
		17	0.003
		19.3	0.143
		20	0.003
		23	0.003
		24	0.216
		26	0.322
		31	0.003
28	VGL1828	14	0.008
		18	0.005
		19	0.799
		20	0.173
		21	0.005
		22	0.008
		23	0.003
29	VGL2009	9	0.188
		11	0.176
		12	0.013
		13	0.198
		14	0.397
		15	0.028
30	VGL2409	13	0.038
		14	0.133
		15	0.259
		16	0.121
		17	0.231
		18	0.216
		21	0.003
31	VGL2918	9	0.003
		12	0.010
		13	0.108
		14	0.585
		15	0.249
		16	0.045
32	VGL3008	10	0.003
		13	0.266
		14	0.183
		15	0.085
		16	0.055
		17	0.206
		18	0.050
		19	0.003
		20	0.008
		21	0.028
		22	0.103
		23	0.010
33	VGL3235	12	0.314
		13	0.347
		14	0.271
		15	0.028
		16	0.033
		17	0.008

Standard genetic assessment based on 33 autosomal STR loci

Samoyed

		N	Na	Ne	Ho	He	F
	Mean	199	6.455	3.257	0.615	0.643	0.042
	SE		0.364	0.208	0.026	0.027	0.010

Standard genetic assessment based on 7 STRs in the DLA region

Samoyed

		N	Na	Ne	Ho	He	F
	Mean	199	6.143	2.117	0.479	0.491	0.025
	SE		0.620	0.209	0.052	0.054	0.010

Standard genetic assessment for individual STR loci

Samoyed

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	199	9	4.578	0.749	0.782	0.042
2	AHT137	199	7	4.489	0.774	0.777	0.004
3	AHTH130	199	4	1.978	0.472	0.494	0.045
4	AHTh171-A	199	5	3.574	0.729	0.720	-0.012
5	AHTh260	199	7	4.257	0.709	0.765	0.074
6	AHTk211	199	3	2.063	0.528	0.515	-0.024
7	AHTk253	199	6	3.538	0.653	0.717	0.089
8	C22.279	199	7	3.756	0.693	0.734	0.055
9	FH2001	199	8	2.936	0.603	0.659	0.086
10	FH2054	199	8	2.246	0.523	0.555	0.058
11	FH2848	199	8	3.547	0.628	0.718	0.125
12	INRA21	199	3	1.124	0.106	0.110	0.042
13	INU005	199	5	3.062	0.608	0.673	0.097
14	INU030	199	4	2.501	0.653	0.600	-0.088
15	INU055	199	5	1.941	0.503	0.485	-0.036
16	LEI004	199	3	1.613	0.387	0.380	-0.018
17	REN105L03	199	10	3.067	0.698	0.674	-0.036
18	REN162C04	199	5	2.430	0.533	0.588	0.095
19	REN169D01	199	8	3.671	0.709	0.728	0.026
20	REN169O18	199	5	2.656	0.573	0.624	0.081
21	REN247M23	199	7	3.585	0.678	0.721	0.059
22	REN54P11	199	5	2.367	0.508	0.578	0.121
23	REN64E19	199	4	2.975	0.683	0.664	-0.029
24	VGL0760	199	9	5.963	0.789	0.832	0.052
25	VGL0910	199	8	4.876	0.769	0.795	0.033
26	VGL1063	199	7	2.269	0.558	0.559	0.003
27	VGL1165	199	9	4.555	0.653	0.780	0.163
28	VGL1828	199	7	1.496	0.281	0.331	0.151
29	VGL2009	199	6	3.783	0.698	0.736	0.050
30	VGL2409	199	7	4.980	0.799	0.799	0.000
31	VGL2918	199	6	2.390	0.598	0.582	-0.028
32	VGL3008	199	12	5.833	0.779	0.829	0.060
33	VGL3235	199	6	3.397	0.683	0.706	0.031

Standard genetic assessment for 7 STRs in the DLA region

Samoyed

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	199	9	2.966	0.646	0.663	0.025
2	DLA I-4ACA	199	6	2.475	0.582	0.596	0.024
3	DLA I-4BCT	199	5	1.636	0.394	0.389	-0.014
4	DLA1131	199	8	1.629	0.387	0.386	-0.002
5	5ACA	199	6	2.461	0.581	0.594	0.022
6	5ACT	199	4	2.337	0.540	0.572	0.056
7	5BCA	199	5	1.313	0.223	0.239	0.064

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Samoyed

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Samoyed

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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