Statistics and Breed-wide Allele Frequency - Samoyed

Updated Jun 15, 2025

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Samoyed (n=195)
1006	387 375 293 180	0.005
1009	382 377 277 184	0.126
1011	376 365 281 180	0.272
1012	388 369 289 188	0.015
1014	375 373 287 178	0.003
1061	380 365 281 183	0.003
1068	380 373 287 181	0.041
1085	376 373 277 186	0.003
1152	390 373 281 180	0.495
1153	389 373 287 183	0.018
1157	386 373 281 180	0.003
1158	390 371 281 180	0.003
1160	386 369 289 176	0.015

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Samoyed (n=195)
2002	343 327 280	0.003
2003	343 324 282	0.015
2007	351 327 280	0.005
2015	339 327 280	0.015
2022	339 327 282	0.110
2024	343 323 280	0.015
2042	341 324 286	0.003
2050	341 327 284	0.003
2053	343 324 280	0.556
2095	355 322 280	0.162
2096	351 322 280	0.110
2099	345 324 276	0.003

Allele Frequencies

#	Locus Name	Allele	Samoyed (n=198)
1	AHT121	94	0.280
		96	0.025
		100	0.116
		102	0.323
		106	0.040
		108	0.116
		112	0.033
		114	0.003
		116	0.063
2	AHT137	131	0.053
		133	0.184
		145	0.015
		147	0.232
		151	0.258
		153	0.255
		155	0.003
3	AHTH130	119	0.194
		121	0.672
		127	0.013
		129	0.121
4	AHTh171-A	219	0.429
		225	0.063
		227	0.131
		229	0.220
		235	0.157
5	AHTh260	236	0.169
		238	0.005
		242	0.212
		246	0.364
		249	0.005
		250	0.114
		252	0.131
6	AHTk211	89	0.341
		91	0.604
		93	0.056
7	AHTk253	284	0.030
		286	0.116
		288	0.149
		290	0.343
		292	0.359
		294	0.003
8	C22.279	116	0.295
		118	0.121
		120	0.073
		122	0.051
		124	0.389
		126	0.005
		134	0.066
9	FH2001	16	0.003
		132	0.018
		136	0.098
		140	0.028
		144	0.510
		148	0.008
		152	0.086
		156	0.250
10	FH2054	148	0.010
		152	0.003
		156	0.005
		160	0.005
		168	0.626
		172	0.149
		176	0.177
		180	0.025
11	FH2848	232	0.003
		234	0.275
		236	0.215
		237	0.003
		238	0.391
		239	0.003
		240	0.071
		244	0.040
12	INRA21	95	0.942
		97	0.043
		101	0.015
13	INU005	110	0.157
		122	0.437
		124	0.328
		126	0.025
		132	0.053
14	INU030	144	0.184
		146	0.008
		148	0.548
		150	0.260
15	INU055	210	0.005
		212	0.005
		214	0.131
		216	0.177
		218	0.682
16	LEI004	85	0.250
		95	0.747
		107	0.003
17	REN105L03	227	0.101
		229	0.179
		231	0.093
		233	0.028
		234	0.003
		235	0.003
		236	0.003
		239	0.056
		241	0.520
		245	0.015
18	REN162C04	200	0.030
		202	0.179
		204	0.598
		206	0.129
		210	0.063
19	REN169D01	202	0.439
		208	0.038
		212	0.114
		216	0.139
		220	0.056
		222	0.008
		224	0.202
		226	0.005
20	REN169O18	162	0.101
		164	0.215
		166	0.553
		168	0.119
		170	0.013
21	REN247M23	266	0.091
		268	0.359
		270	0.222
		272	0.303
		274	0.005
		276	0.003
		278	0.018
22	REN54P11	226	0.129
		232	0.581
		234	0.268
		236	0.020
		238	0.003
23	REN64E19	139	0.452
		143	0.331
		145	0.109
		147	0.109
24	VGL0760	12	0.126
		13	0.179
		14	0.098
		18.2	0.230
		19.2	0.020
		20.2	0.068
		21.2	0.222
		22.2	0.053
		26.2	0.003
25	VGL0910	17.1	0.235
		18.1	0.068
		19.1	0.020
		20.1	0.056
		21.1	0.321
		22.1	0.179
		23.1	0.058
		24.1	0.063
26	VGL1063	9	0.005
		11	0.005
		12	0.593
		13	0.013
		14	0.068
		17	0.288
		18	0.028
27	VGL1165	14	0.179
		15	0.131
		17	0.003
		19.3	0.141
		20	0.003
		23	0.003
		24	0.217
		26	0.321
		31	0.003
28	VGL1828	14	0.008
		18	0.005
		19	0.798
		20	0.174
		21	0.005
		22	0.008
		23	0.003
29	VGL2009	9	0.189
		11	0.177
		12	0.013
		13	0.199
		14	0.394
		15	0.028
30	VGL2409	13	0.038
		14	0.134
		15	0.258
		16	0.121
		17	0.230
		18	0.217
		21	0.003
31	VGL2918	9	0.003
		12	0.010
		13	0.109
		14	0.586
		15	0.250
		16	0.043
32	VGL3008	10	0.003
		13	0.265
		14	0.184
		15	0.086
		16	0.056
		17	0.207
		18	0.051
		19	0.003
		20	0.008
		21	0.028
		22	0.101
		23	0.010
33	VGL3235	12	0.311
		13	0.348
		14	0.273
		15	0.028
		16	0.033
		17	0.008

Standard genetic assessment based on 33 autosomal STR loci

Samoyed

		N	Na	Ne	Ho	He	F
	Mean	198	6.455	3.259	0.615	0.643	0.042
	SE		0.364	0.208	0.026	0.027	0.010

Standard genetic assessment based on 7 STRs in the DLA region

Samoyed

		N	Na	Ne	Ho	He	F
	Mean	198	6.143	2.104	0.477	0.488	0.019
	SE		0.620	0.208	0.052	0.055	0.009

Standard genetic assessment for individual STR loci

Samoyed

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	198	9	4.600	0.753	0.783	0.038
2	AHT137	198	7	4.496	0.773	0.778	0.006
3	AHTH130	198	4	1.985	0.475	0.496	0.043
4	AHTh171-A	198	5	3.593	0.732	0.722	-0.015
5	AHTh260	198	7	4.236	0.707	0.764	0.074
6	AHTk211	198	3	2.068	0.530	0.516	-0.027
7	AHTk253	198	6	3.532	0.652	0.717	0.091
8	C22.279	198	7	3.767	0.692	0.735	0.058
9	FH2001	198	8	2.933	0.601	0.659	0.088
10	FH2054	198	8	2.240	0.520	0.554	0.060
11	FH2848	198	8	3.550	0.626	0.718	0.128
12	INRA21	198	3	1.124	0.106	0.111	0.042
13	INU005	198	5	3.062	0.611	0.673	0.093
14	INU030	198	4	2.488	0.657	0.598	-0.098
15	INU055	198	5	1.948	0.505	0.487	-0.038
16	LEI004	198	3	1.610	0.384	0.379	-0.013
17	REN105L03	198	10	3.069	0.697	0.674	-0.034
18	REN162C04	198	5	2.428	0.530	0.588	0.098
19	REN169D01	198	8	3.694	0.712	0.729	0.024
20	REN169O18	198	5	2.657	0.571	0.624	0.085
21	REN247M23	198	7	3.592	0.677	0.722	0.062
22	REN54P11	198	5	2.347	0.505	0.574	0.120
23	REN64E19	198	4	2.964	0.682	0.663	-0.029
24	VGL0760	198	9	5.958	0.788	0.832	0.053
25	VGL0910	198	8	4.863	0.768	0.794	0.034
26	VGL1063	198	7	2.269	0.556	0.559	0.007
27	VGL1165	198	9	4.557	0.652	0.781	0.165
28	VGL1828	198	7	1.499	0.283	0.333	0.150
29	VGL2009	198	6	3.802	0.702	0.737	0.047
30	VGL2409	198	7	4.991	0.798	0.800	0.002
31	VGL2918	198	6	2.384	0.596	0.581	-0.027
32	VGL3008	198	12	5.837	0.778	0.829	0.061
33	VGL3235	198	6	3.399	0.687	0.706	0.027

Standard genetic assessment for 7 STRs in the DLA region

Samoyed

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	198	9	2.942	0.645	0.660	0.023
2	DLA I-4ACA	198	6	2.455	0.579	0.593	0.022
3	DLA I-4BCT	198	5	1.621	0.391	0.383	-0.020
4	DLA1131	198	8	1.615	0.384	0.381	-0.008
5	5ACA	198	6	2.458	0.579	0.593	0.024
6	5ACT	198	4	2.334	0.538	0.571	0.058
7	5BCA	198	5	1.302	0.224	0.232	0.033

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Samoyed

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Samoyed

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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