Statistics and Breed-wide Allele Frequency - Poodle

Updated Oct 4, 2023

DLA Class I Haplotype Frequencies

DLA1 #STR typesPoodle (n=5177)
1001380 373 281 1820.26656
1002380 365 281 1810.15965
1003387 375 277 1860.17500
1004393 379 277 1830.08432
1005389 371 277 1810.06732
1006387 375 293 1800.04752
1007380 372 281 1820.03438
1008386 373 289 1820.01304
1009382 377 277 1840.01478
1010384 371 277 1860.01120
1011376 365 281 1800.01980
1012388 369 289 1880.01478
1013392 373 289 1860.00898
1014375 373 287 1780.01111
1015380 373 291 1860.00135
1016382 371 277 1780.02173
1017386 373 289 1780.00261
1018375 373 287 1860.00918
1019380 373 287 1850.00319
1020388 369 289 1840.00309
1021380 373 289 1860.00184
1022380 375 281 1810.00010
1023380 379 281 1810.00010
1024387 373 281 1820.00010
1025380 365 281 1860.00019
1026390 369 289 1860.00357
1027391 371 277 1810.00048
1028376 369 291 1860.00097
1029380 365 281 1820.00164
1030380 373 293 1780.00212
1031382 371 277 1860.00126
1032382 377 277 1780.00010
1033382 379 277 1810.00338
1034382 379 277 1820.00048
1035386 373 277 1840.00010
1036389 365 289 1800.00164
1040380 371 277 1860.00058
1043393 381 277 1830.00135
1045376 371 277 1860.00068
1046376 379 291 1800.00029
1052380 372 289 1840.00029
1053382 377 277 1860.00019
1054382 379 277 1840.00019
1065380 371 277 1810.00019
1069380 365 281 1840.00010
1084376 373 277 1840.00029
1092376 379 277 1810.00019
1093386 379 277 1800.00048
1102389 375 293 1800.00010
1103389 375 293 1810.00019
1105382 379 277 1780.00357
1106395 379 277 1780.00010
1107376 375 293 1830.00010
1109381 379 291 1860.00097
1111387 378 287 1820.00010
1130380 373 287 1780.00010
1134384 365 291 1780.00019
1141380 365 281 1800.00019
1168382 379 289 1860.00010
1169380 365 277 1800.00106
1225387 374 287 1860.00010
1234380 371 281 1810.00019
1265387 375 277 1840.00010
1270376 365 281 1810.00010
1271387 375 277 1810.00019
1279393 379 277 1860.00010

DLA Class II Haplotype Frequencies

DLA2 #STR typesPoodle (n=5177)
2001343 324 2840.59967
2002343 327 2800.08557
2003343 324 2820.10402
2004351 327 2680.02917
2005339 322 2800.01594
2006339 325 2800.03438
2007351 327 2800.01661
2008339 327 2760.01487
2009351 324 2800.00763
2010345 329 2800.01120
2011345 322 2840.01990
2012345 322 2800.00715
2013345 327 2840.01062
2014339 322 2840.01999
2015339 327 2800.00415
2016339 323 2840.00328
2017343 322 2800.00212
2019345 324 2840.00010
2020349 324 2840.00019
2021339 324 2680.00367
2022339 327 2820.00048
2023341 323 2820.00212
2024343 323 2800.00058
2025351 321 2800.00164
2026351 324 2840.00097
2028345 327 2880.00058
2032339 323 2800.00048
2035341 323 2800.00010
2037341 327 2800.00048
2039345 327 2760.00058
2040345 327 2800.00010
2048339 331 2820.00019
2050341 327 2840.00010
2064351 327 2840.00097
2066339 324 2800.00010
2101341 324 2800.00019
2115343 327 2840.00010

Allele Frequencies

#Locus NameAllelePoodle (n=5178)
1AHT121 920.01197
940.02231
960.01236
980.31788
1000.08642
1020.00637
1040.19699
1060.08217
1080.17323
1100.06672
1120.02337
1140.00019
2AHT137 1310.23035
1330.01043
1350.00039
1370.17549
1390.00048
1410.36836
1430.01275
1450.04732
1470.05563
1490.00222
1510.09639
1530.00019
3AHTH130 1110.01694
1170.00255
1190.38504
1210.13866
1230.07834
1250.00078
1270.13141
1290.21553
1310.01586
1330.01263
1350.00225
4AHTh171-A 2170.00637
2190.36694
2210.23436
2230.00647
2250.14484
2270.00917
2290.04934
2310.02057
2330.00116
2350.14059
2370.02018
5AHTh260 2380.57119
2400.02850
2420.00029
2440.05844
2460.19030
2480.06520
2500.03468
2520.03700
2540.00589
2560.00850
6AHTk211 870.18308
890.03959
910.67343
930.00367
950.10004
970.00019
7AHTk253 2800.00946
2840.12939
2860.11356
2880.40711
2900.21456
2920.12534
2960.00058
8C22.279 1160.07937
1180.39919
1200.00425
1240.36027
1260.06769
1280.02153
1300.06759
1340.00010
9FH2001 1240.02019
1320.42224
1360.07129
1400.01797
1440.24179
1480.21252
1520.01275
1580.00126
10FH2054 1480.01053
1520.03110
1560.55003
1600.01719
1640.00290
1680.29660
1720.07949
1760.01111
1800.00106
11FH2848 2300.01517
2320.01613
2340.01140
2360.05323
2380.13804
2400.68789
2420.07757
2440.00019
2460.00039
12INRA21 910.35409
930.00010
950.40295
970.04732
990.05630
1010.11452
1030.00763
1050.01419
1090.00290
13INU005 1100.01941
1200.00010
1220.00058
1240.51497
1260.44892
1280.00183
1300.01149
1320.00029
1380.00241
14INU030 1440.31837
1460.14938
1480.06499
1500.08729
1520.37881
1540.00077
1560.00029
1580.00010
15INU055 2080.00164
2100.21871
2120.06074
2140.29616
2160.36839
2180.03843
2200.01458
2220.00135
16LEI004 850.65556
950.09917
970.00454
1050.00077
1070.20857
1090.03138
17REN105L03 2270.00995
2310.27545
2330.20089
2350.00715
2370.01497
2390.01198
2410.47933
2430.00029
18REN162C04 2000.02048
2020.17172
2040.06558
2060.54636
2080.09079
2100.06587
2120.03921
19REN169D01 2020.00929
2100.00126
2120.07094
2140.00097
2160.40786
2180.26278
2200.00184
2220.04897
2240.17383
2260.02226
20REN169O18 1560.00135
1600.03380
1620.57089
1640.31398
1660.01536
1680.02366
1700.03255
1720.00840
21REN247M23 2660.03438
2680.52260
2700.23585
2720.20012
2740.00251
2780.00454
22REN54P11 2220.00183
2260.26574
2280.16889
2300.00338
2320.33420
2340.21128
2360.00435
2380.00956
2420.00077
23REN64E19 1390.00222
1430.00541
1450.42410
1470.24778
1490.03418
1530.25888
1550.02742
24VGL0760 120.29737
130.00116
140.01468
150.00869
180.00164
190.08683
19.20.13724
200.03602
20.20.16216
210.00135
21.20.05128
22.20.01642
23.20.11010
24.20.05988
25.20.01468
26.20.00048
25VGL0910 120.00048
130.04780
140.01728
150.01931
15.10.01603
160.00019
16.10.00512
17.10.10525
18.10.27462
190.00010
19.10.12968
20.10.03998
21.10.27935
220.00753
22.10.02163
230.03051
23.10.00396
240.00116
26VGL1063 80.02733
90.00241
100.00010
110.00145
120.03467
130.15856
140.13924
150.08430
160.09946
170.03071
180.04413
190.30137
200.04249
210.02520
220.00686
230.00164
240.00010
27VGL1165 130.00010
140.00010
150.00676
160.04316
170.00328
180.01777
190.00946
200.00077
210.07918
220.00309
230.00270
240.01584
250.11375
25.30.00010
260.47721
270.10941
280.10941
290.00241
300.00425
310.00087
320.00029
340.00010
28VGL1828 140.03737
150.00048
160.04751
170.02182
180.08710
190.42835
200.33642
210.03428
220.00657
230.00010
29VGL2009 90.45124
100.00589
110.03525
120.04799
130.24401
140.18743
150.02800
160.00019
30VGL2409 130.03922
140.26265
150.18943
160.15224
170.19513
180.13727
190.02357
200.00048
31VGL2918 70.00010
120.00521
130.11143
140.20761
150.15827
160.04316
16.30.00145
170.00222
17.30.03283
18.30.02192
19.30.11636
20.30.11906
21.30.14195
22.30.03525
23.30.00319
32VGL3008 120.00010
130.01120
140.03505
150.23397
160.03776
170.50183
180.02462
18.20.00019
190.12949
200.02356
210.00212
230.00010
33VGL3235 120.15353
130.04886
140.15604
150.04587
160.30427
170.22132
180.06924
190.00087

Standard genetic assessment based on 33 autosomal STR loci

Poodle

  NNaNeHoHeF
Mean517810.0613.7280.6800.7000.030
 SE 0.6410.2280.0170.0170.003

Standard genetic assessment based on 7 STRs in the DLA region

Poodle

  NNaNeHoHeF
Mean51788.7142.9900.5830.6040.035
 SE 1.1730.4650.0570.0590.006

Standard genetic assessment for individual STR loci

Poodle

#LocusNNaNeHoHeF
1AHT1215178125.2650.7930.8100.021
2AHT1375178124.2650.7520.7660.018
3AHTH1305178114.2010.7320.7620.040
4AHTh171-A5178114.2780.7560.7660.014
5AHTh2605178102.6760.6070.6260.031
6AHTk211517862.0060.4680.5010.066
7AHTk253517873.8880.7350.7430.011
8C22.279517883.2780.7070.695-0.018
9FH2001517883.4740.6910.7120.029
10FH2054517892.5100.5980.6020.006
11FH2848517891.9930.4730.4980.050
12INRA21517893.2620.6720.6930.031
13INU005517892.1400.5100.5330.043
14INU030517883.5840.6930.7210.038
15INU055517883.6150.7120.7230.016
16LEI004517862.0660.5140.5160.004
17REN105L03517882.8860.6200.6530.052
18REN162C04517872.8830.6200.6530.050
19REN169D015178103.6540.6920.7260.048
20REN169O18517882.3390.5460.5720.045
21REN247M23517862.7030.6040.6300.041
22REN54P11517893.9120.7000.7440.060
23REN64E19517873.2230.6690.6900.030
24VGL07605178166.1910.8290.8380.012
25VGL09105178185.3290.8060.8120.008
26VGL10635178176.2620.8170.8400.028
27VGL11655178223.6560.6880.7270.052
28VGL18285178103.2300.6690.6900.032
29VGL2009517883.3040.6610.6970.052
30VGL2409517885.3460.8050.8130.009
31VGL29185178157.5110.8570.8670.011
32VGL30085178123.0550.6610.6730.018
33VGL3235517885.0310.7740.8010.034

Standard genetic assessment for 7 STRs in the DLA region

Poodle

#LocusNNaNeHoHeF
1DLA I-3CCA5178153.4450.6870.7100.032
2DLA I-4ACA5178114.8020.7720.7920.024
3DLA I-4BCT517862.5600.5870.6090.037
4DLA1131517894.6430.7580.7850.034
55ACA517861.5560.3520.3570.016
65ACT517881.8310.4420.4540.027
75BCA517862.0900.4840.5220.072