Updated Feb 15, 2025
DLA Class I Haplotype Frequencies
DLA1 # | STR types | Poodle (n=5659) |
---|---|---|
1001 | 380 373 281 182 | 0.26648 |
1002 | 380 365 281 181 | 0.16063 |
1003 | 387 375 277 186 | 0.17459 |
1004 | 393 379 277 183 | 0.08341 |
1005 | 389 371 277 181 | 0.06945 |
1006 | 387 375 293 180 | 0.04939 |
1007 | 380 372 281 182 | 0.03340 |
1008 | 386 373 289 182 | 0.01228 |
1009 | 382 377 277 184 | 0.01484 |
1010 | 384 371 277 186 | 0.01122 |
1011 | 376 365 281 180 | 0.01926 |
1012 | 388 369 289 188 | 0.01467 |
1013 | 392 373 289 186 | 0.00848 |
1014 | 375 373 287 178 | 0.01078 |
1015 | 380 373 291 186 | 0.00124 |
1016 | 382 371 277 178 | 0.02121 |
1017 | 386 373 289 178 | 0.00239 |
1018 | 375 373 287 186 | 0.00998 |
1019 | 380 373 287 185 | 0.00292 |
1020 | 388 369 289 184 | 0.00283 |
1021 | 380 373 289 186 | 0.00177 |
1022 | 380 375 281 181 | 0.00009 |
1023 | 380 379 281 181 | 0.00009 |
1024 | 387 373 281 182 | 0.00009 |
1025 | 380 365 281 186 | 0.00018 |
1026 | 390 369 289 186 | 0.00327 |
1027 | 391 371 277 181 | 0.00044 |
1028 | 376 369 291 186 | 0.00106 |
1029 | 380 365 281 182 | 0.00159 |
1030 | 380 373 293 178 | 0.00212 |
1031 | 382 371 277 186 | 0.00124 |
1032 | 382 377 277 178 | 0.00009 |
1033 | 382 379 277 181 | 0.00336 |
1034 | 382 379 277 182 | 0.00053 |
1035 | 386 373 277 184 | 0.00009 |
1036 | 389 365 289 180 | 0.00159 |
1040 | 380 371 277 186 | 0.00053 |
1043 | 393 381 277 183 | 0.00141 |
1045 | 376 371 277 186 | 0.00062 |
1046 | 376 379 291 180 | 0.00035 |
1052 | 380 372 289 184 | 0.00035 |
1053 | 382 377 277 186 | 0.00018 |
1054 | 382 379 277 184 | 0.00018 |
1065 | 380 371 277 181 | 0.00018 |
1069 | 380 365 281 184 | 0.00009 |
1084 | 376 373 277 184 | 0.00027 |
1092 | 376 379 277 181 | 0.00018 |
1093 | 386 379 277 180 | 0.00044 |
1102 | 389 375 293 180 | 0.00009 |
1103 | 389 375 293 181 | 0.00018 |
1105 | 382 379 277 178 | 0.00371 |
1106 | 395 379 277 178 | 0.00009 |
1107 | 376 375 293 183 | 0.00018 |
1109 | 381 379 291 186 | 0.00150 |
1111 | 387 378 287 182 | 0.00009 |
1130 | 380 373 287 178 | 0.00009 |
1134 | 384 365 291 178 | 0.00018 |
1141 | 380 365 281 180 | 0.00018 |
1168 | 382 379 289 186 | 0.00018 |
1169 | 380 365 277 180 | 0.00097 |
1225 | 387 374 287 186 | 0.00009 |
1234 | 380 371 281 181 | 0.00018 |
1265 | 387 375 277 184 | 0.00009 |
1270 | 376 365 281 181 | 0.00009 |
1271 | 387 375 277 181 | 0.00018 |
1279 | 393 379 277 186 | 0.00009 |
null | 0.00009 |
DLA Class II Haplotype Frequencies
DLA2 # | STR types | Poodle (n=5659) |
---|---|---|
2001 | 343 324 284 | 0.60099 |
2002 | 343 327 280 | 0.08473 |
2003 | 343 324 282 | 0.10629 |
2004 | 351 327 268 | 0.03066 |
2005 | 339 322 280 | 0.01493 |
2006 | 339 325 280 | 0.03340 |
2007 | 351 327 280 | 0.01705 |
2008 | 339 327 276 | 0.01493 |
2009 | 351 324 280 | 0.00698 |
2010 | 345 329 280 | 0.01122 |
2011 | 345 322 284 | 0.01935 |
2012 | 345 322 280 | 0.00725 |
2013 | 345 327 284 | 0.01025 |
2014 | 339 322 284 | 0.01917 |
2015 | 339 327 280 | 0.00398 |
2016 | 339 323 284 | 0.00309 |
2017 | 343 322 280 | 0.00212 |
2019 | 345 324 284 | 0.00009 |
2020 | 349 324 284 | 0.00018 |
2021 | 339 324 268 | 0.00380 |
2022 | 339 327 282 | 0.00044 |
2023 | 341 323 282 | 0.00212 |
2024 | 343 323 280 | 0.00062 |
2025 | 351 321 280 | 0.00159 |
2026 | 351 324 284 | 0.00097 |
2028 | 345 327 288 | 0.00053 |
2032 | 339 323 280 | 0.00044 |
2035 | 341 323 280 | 0.00009 |
2037 | 341 327 280 | 0.00044 |
2039 | 345 327 276 | 0.00053 |
2040 | 345 327 280 | 0.00009 |
2048 | 339 331 282 | 0.00018 |
2050 | 341 327 284 | 0.00018 |
2053 | 343 324 280 | 0.00009 |
2064 | 351 327 284 | 0.00088 |
2066 | 339 324 280 | 0.00009 |
2101 | 341 324 280 | 0.00018 |
2115 | 343 327 284 | 0.00009 |
Allele Frequencies
# | Locus Name | Allele | Poodle (n=5662) |
---|---|---|---|
1 | AHT121 | 92 | 0.01272 |
94 | 0.02234 | ||
96 | 0.01236 | ||
98 | 0.31667 | ||
100 | 0.08531 | ||
102 | 0.00645 | ||
104 | 0.19772 | ||
106 | 0.08345 | ||
108 | 0.17185 | ||
110 | 0.06703 | ||
112 | 0.02323 | ||
114 | 0.00079 | ||
116 | 0.00009 | ||
2 | AHT137 | 131 | 0.23229 |
133 | 0.01033 | ||
135 | 0.00088 | ||
137 | 0.17523 | ||
139 | 0.00044 | ||
141 | 0.36548 | ||
143 | 0.01316 | ||
145 | 0.04602 | ||
147 | 0.05874 | ||
149 | 0.00256 | ||
151 | 0.09459 | ||
153 | 0.00026 | ||
3 | AHTH130 | 111 | 0.01718 |
117 | 0.00233 | ||
119 | 0.37938 | ||
121 | 0.14146 | ||
123 | 0.07838 | ||
125 | 0.00125 | ||
127 | 0.13314 | ||
129 | 0.21698 | ||
131 | 0.01530 | ||
133 | 0.01253 | ||
135 | 0.00206 | ||
4 | AHTh171-A | 217 | 0.00601 |
219 | 0.37087 | ||
221 | 0.23044 | ||
223 | 0.00627 | ||
225 | 0.14149 | ||
227 | 0.00901 | ||
229 | 0.04911 | ||
231 | 0.02199 | ||
233 | 0.00150 | ||
235 | 0.14397 | ||
237 | 0.01934 | ||
5 | AHTh260 | 238 | 0.57297 |
240 | 0.03118 | ||
242 | 0.00027 | ||
244 | 0.05883 | ||
246 | 0.18790 | ||
248 | 0.06422 | ||
250 | 0.03375 | ||
252 | 0.03675 | ||
254 | 0.00627 | ||
256 | 0.00786 | ||
6 | AHTk211 | 87 | 0.18359 |
89 | 0.03930 | ||
91 | 0.67406 | ||
93 | 0.00406 | ||
95 | 0.09882 | ||
97 | 0.00018 | ||
7 | AHTk253 | 280 | 0.00883 |
284 | 0.12763 | ||
286 | 0.11376 | ||
288 | 0.40541 | ||
290 | 0.21418 | ||
292 | 0.12948 | ||
296 | 0.00071 | ||
8 | C22.279 | 116 | 0.08027 |
118 | 0.40118 | ||
120 | 0.00468 | ||
124 | 0.35570 | ||
126 | 0.06826 | ||
128 | 0.02146 | ||
130 | 0.06835 | ||
134 | 0.00009 | ||
9 | FH2001 | 124 | 0.01970 |
132 | 0.42792 | ||
136 | 0.07155 | ||
140 | 0.01802 | ||
144 | 0.24011 | ||
148 | 0.20892 | ||
152 | 0.01263 | ||
158 | 0.00115 | ||
10 | FH2054 | 148 | 0.01051 |
152 | 0.03162 | ||
156 | 0.55202 | ||
160 | 0.01749 | ||
164 | 0.00353 | ||
168 | 0.29580 | ||
172 | 0.07737 | ||
176 | 0.01069 | ||
180 | 0.00097 | ||
11 | FH2848 | 230 | 0.01520 |
232 | 0.01573 | ||
234 | 0.01255 | ||
236 | 0.05346 | ||
238 | 0.13680 | ||
240 | 0.68938 | ||
242 | 0.07635 | ||
244 | 0.00018 | ||
246 | 0.00035 | ||
12 | INRA21 | 91 | 0.35403 |
93 | 0.00009 | ||
95 | 0.40427 | ||
97 | 0.04742 | ||
99 | 0.05528 | ||
101 | 0.11471 | ||
103 | 0.00742 | ||
105 | 0.01386 | ||
109 | 0.00291 | ||
13 | INU005 | 110 | 0.01969 |
120 | 0.00009 | ||
122 | 0.00053 | ||
124 | 0.51386 | ||
126 | 0.44887 | ||
128 | 0.00185 | ||
130 | 0.01166 | ||
132 | 0.00115 | ||
138 | 0.00230 | ||
14 | INU030 | 144 | 0.32330 |
146 | 0.14906 | ||
148 | 0.06508 | ||
150 | 0.08725 | ||
152 | 0.37416 | ||
154 | 0.00079 | ||
156 | 0.00026 | ||
158 | 0.00009 | ||
15 | INU055 | 208 | 0.00159 |
210 | 0.21874 | ||
212 | 0.05917 | ||
214 | 0.29468 | ||
216 | 0.36983 | ||
218 | 0.03939 | ||
220 | 0.01537 | ||
222 | 0.00124 | ||
16 | LEI004 | 85 | 0.65412 |
95 | 0.10104 | ||
97 | 0.00486 | ||
105 | 0.00071 | ||
107 | 0.20685 | ||
109 | 0.03241 | ||
17 | REN105L03 | 227 | 0.01016 |
231 | 0.27894 | ||
233 | 0.19712 | ||
235 | 0.00742 | ||
237 | 0.01502 | ||
239 | 0.01175 | ||
241 | 0.47932 | ||
243 | 0.00027 | ||
18 | REN162C04 | 200 | 0.02049 |
202 | 0.17085 | ||
204 | 0.06873 | ||
206 | 0.54426 | ||
208 | 0.08922 | ||
210 | 0.06369 | ||
212 | 0.04267 | ||
214 | 0.00009 | ||
19 | REN169D01 | 202 | 0.00974 |
210 | 0.00133 | ||
212 | 0.07029 | ||
214 | 0.00089 | ||
216 | 0.41103 | ||
218 | 0.25779 | ||
220 | 0.00195 | ||
222 | 0.05046 | ||
224 | 0.17449 | ||
226 | 0.02204 | ||
20 | REN169O18 | 156 | 0.00124 |
160 | 0.03393 | ||
162 | 0.56574 | ||
164 | 0.31516 | ||
166 | 0.01758 | ||
168 | 0.02421 | ||
170 | 0.03287 | ||
172 | 0.00928 | ||
21 | REN247M23 | 266 | 0.03375 |
268 | 0.52819 | ||
270 | 0.23211 | ||
272 | 0.19853 | ||
274 | 0.00256 | ||
278 | 0.00486 | ||
22 | REN54P11 | 222 | 0.00318 |
226 | 0.26656 | ||
228 | 0.16631 | ||
230 | 0.00433 | ||
232 | 0.33466 | ||
234 | 0.20995 | ||
236 | 0.00415 | ||
238 | 0.01007 | ||
242 | 0.00079 | ||
23 | REN64E19 | 139 | 0.00238 |
143 | 0.00503 | ||
145 | 0.42776 | ||
147 | 0.24664 | ||
149 | 0.03515 | ||
153 | 0.25689 | ||
155 | 0.02614 | ||
24 | VGL0760 | 12 | 0.29712 |
13 | 0.00141 | ||
14 | 0.01387 | ||
15 | 0.00839 | ||
18 | 0.00150 | ||
19 | 0.08479 | ||
19.2 | 0.14043 | ||
20 | 0.03648 | ||
20.2 | 0.16110 | ||
21 | 0.00132 | ||
21.2 | 0.05361 | ||
22.2 | 0.01696 | ||
23.2 | 0.10890 | ||
24.2 | 0.05953 | ||
25.2 | 0.01413 | ||
26.2 | 0.00044 | ||
25 | VGL0910 | 12 | 0.00044 |
13 | 0.04875 | ||
14 | 0.01713 | ||
15 | 0.01890 | ||
15.1 | 0.01581 | ||
16 | 0.00026 | ||
16.1 | 0.00477 | ||
17.1 | 0.10747 | ||
18.1 | 0.27155 | ||
19 | 0.00009 | ||
19.1 | 0.13017 | ||
20.1 | 0.04239 | ||
21.1 | 0.27649 | ||
22 | 0.00724 | ||
22.1 | 0.02323 | ||
23 | 0.03038 | ||
23.1 | 0.00371 | ||
24 | 0.00124 | ||
26 | VGL1063 | 8 | 0.02817 |
9 | 0.00221 | ||
10 | 0.00009 | ||
11 | 0.00159 | ||
12 | 0.03453 | ||
13 | 0.16310 | ||
14 | 0.13838 | ||
15 | 0.08725 | ||
16 | 0.09793 | ||
17 | 0.03223 | ||
18 | 0.04380 | ||
19 | 0.29698 | ||
20 | 0.04080 | ||
21 | 0.02481 | ||
22 | 0.00653 | ||
23 | 0.00150 | ||
24 | 0.00009 | ||
27 | VGL1165 | 13 | 0.00009 |
14 | 0.00018 | ||
15 | 0.00653 | ||
16 | 0.04265 | ||
17 | 0.00397 | ||
18 | 0.01854 | ||
19 | 0.00910 | ||
20 | 0.00079 | ||
21 | 0.07851 | ||
22 | 0.00300 | ||
23 | 0.00283 | ||
24 | 0.01590 | ||
25 | 0.11339 | ||
25.3 | 0.00009 | ||
26 | 0.47713 | ||
27 | 0.10827 | ||
28 | 0.11083 | ||
29 | 0.00230 | ||
30 | 0.00459 | ||
31 | 0.00097 | ||
32 | 0.00026 | ||
34 | 0.00009 | ||
28 | VGL1828 | 14 | 0.03744 |
15 | 0.00053 | ||
16 | 0.04671 | ||
17 | 0.02287 | ||
18 | 0.08716 | ||
19 | 0.42547 | ||
20 | 0.33910 | ||
21 | 0.03365 | ||
22 | 0.00698 | ||
23 | 0.00009 | ||
29 | VGL2009 | 9 | 0.45452 |
10 | 0.00636 | ||
11 | 0.03444 | ||
12 | 0.04645 | ||
13 | 0.24364 | ||
14 | 0.18624 | ||
15 | 0.02817 | ||
16 | 0.00018 | ||
30 | VGL2409 | 13 | 0.03913 |
14 | 0.26440 | ||
15 | 0.18472 | ||
16 | 0.15415 | ||
17 | 0.19894 | ||
18 | 0.13463 | ||
19 | 0.02359 | ||
20 | 0.00044 | ||
31 | VGL2918 | 7 | 0.00009 |
12 | 0.00503 | ||
13 | 0.11427 | ||
14 | 0.20585 | ||
15 | 0.15710 | ||
16 | 0.04301 | ||
16.3 | 0.00141 | ||
17 | 0.00221 | ||
17.3 | 0.03223 | ||
18.3 | 0.02181 | ||
19.3 | 0.11948 | ||
20.3 | 0.11710 | ||
21.3 | 0.14209 | ||
22.3 | 0.03497 | ||
23.3 | 0.00336 | ||
32 | VGL3008 | 12 | 0.00009 |
13 | 0.01174 | ||
14 | 0.03356 | ||
15 | 0.23481 | ||
16 | 0.03797 | ||
17 | 0.50159 | ||
18 | 0.02552 | ||
18.2 | 0.00018 | ||
19 | 0.12840 | ||
20 | 0.02375 | ||
21 | 0.00230 | ||
23 | 0.00009 | ||
33 | VGL3235 | 12 | 0.15436 |
13 | 0.04945 | ||
14 | 0.15940 | ||
15 | 0.04698 | ||
16 | 0.29963 | ||
17 | 0.21998 | ||
18 | 0.06915 | ||
19 | 0.00106 |
Standard genetic assessment based on 33 autosomal STR loci
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 5662 | 10.121 | 3.734 | 0.680 | 0.700 | 0.030 | |
SE | 0.641 | 0.230 | 0.017 | 0.017 | 0.003 |
Standard genetic assessment based on 7 STRs in the DLA region
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 5662 | 8.714 | 2.988 | 0.583 | 0.603 | 0.034 | |
SE | 1.173 | 0.466 | 0.058 | 0.059 | 0.007 |
Standard genetic assessment for individual STR loci
Poodle
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | AHT121 | 5662 | 13 | 5.290 | 0.794 | 0.811 | 0.021 |
2 | AHT137 | 5662 | 12 | 4.291 | 0.755 | 0.767 | 0.015 |
3 | AHTH130 | 5662 | 11 | 4.245 | 0.737 | 0.764 | 0.035 |
4 | AHTh171-A | 5662 | 11 | 4.259 | 0.754 | 0.765 | 0.014 |
5 | AHTh260 | 5662 | 10 | 2.668 | 0.606 | 0.625 | 0.030 |
6 | AHTk211 | 5662 | 6 | 2.002 | 0.472 | 0.501 | 0.057 |
7 | AHTk253 | 5662 | 7 | 3.902 | 0.738 | 0.744 | 0.008 |
8 | C22.279 | 5662 | 8 | 3.292 | 0.704 | 0.696 | -0.011 |
9 | FH2001 | 5662 | 8 | 3.443 | 0.690 | 0.710 | 0.027 |
10 | FH2054 | 5662 | 9 | 2.502 | 0.600 | 0.600 | 0.000 |
11 | FH2848 | 5662 | 9 | 1.987 | 0.472 | 0.497 | 0.050 |
12 | INRA21 | 5662 | 9 | 3.252 | 0.666 | 0.693 | 0.039 |
13 | INU005 | 5662 | 9 | 2.146 | 0.511 | 0.534 | 0.043 |
14 | INU030 | 5662 | 8 | 3.590 | 0.690 | 0.721 | 0.043 |
15 | INU055 | 5662 | 8 | 3.613 | 0.711 | 0.723 | 0.018 |
16 | LEI004 | 5662 | 6 | 2.075 | 0.514 | 0.518 | 0.008 |
17 | REN105L03 | 5662 | 8 | 2.882 | 0.621 | 0.653 | 0.049 |
18 | REN162C04 | 5662 | 8 | 2.904 | 0.622 | 0.656 | 0.052 |
19 | REN169D01 | 5662 | 10 | 3.651 | 0.685 | 0.726 | 0.057 |
20 | REN169O18 | 5662 | 8 | 2.366 | 0.553 | 0.577 | 0.041 |
21 | REN247M23 | 5662 | 6 | 2.678 | 0.597 | 0.627 | 0.047 |
22 | REN54P11 | 5662 | 9 | 3.923 | 0.700 | 0.745 | 0.060 |
23 | REN64E19 | 5662 | 7 | 3.208 | 0.669 | 0.688 | 0.028 |
24 | VGL0760 | 5662 | 16 | 6.192 | 0.827 | 0.838 | 0.014 |
25 | VGL0910 | 5662 | 18 | 5.396 | 0.808 | 0.815 | 0.008 |
26 | VGL1063 | 5662 | 17 | 6.312 | 0.820 | 0.842 | 0.025 |
27 | VGL1165 | 5662 | 22 | 3.659 | 0.690 | 0.727 | 0.050 |
28 | VGL1828 | 5662 | 10 | 3.237 | 0.668 | 0.691 | 0.033 |
29 | VGL2009 | 5662 | 8 | 3.281 | 0.658 | 0.695 | 0.053 |
30 | VGL2409 | 5662 | 8 | 5.331 | 0.804 | 0.812 | 0.010 |
31 | VGL2918 | 5662 | 15 | 7.523 | 0.859 | 0.867 | 0.010 |
32 | VGL3008 | 5662 | 12 | 3.057 | 0.661 | 0.673 | 0.017 |
33 | VGL3235 | 5662 | 8 | 5.080 | 0.775 | 0.803 | 0.036 |
Standard genetic assessment for 7 STRs in the DLA region
Poodle
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | DLA I-3CCA | 5662 | 15 | 3.446 | 0.687 | 0.710 | 0.033 |
2 | DLA I-4ACA | 5662 | 11 | 4.804 | 0.775 | 0.792 | 0.021 |
3 | DLA I-4BCT | 5662 | 6 | 2.565 | 0.588 | 0.610 | 0.037 |
4 | DLA1131 | 5662 | 9 | 4.639 | 0.760 | 0.784 | 0.031 |
5 | 5ACA | 5662 | 6 | 1.546 | 0.348 | 0.353 | 0.014 |
6 | 5ACT | 5662 | 8 | 1.818 | 0.438 | 0.450 | 0.027 |
7 | 5BCA | 5662 | 6 | 2.097 | 0.485 | 0.523 | 0.074 |