Statistics and Breed-wide Allele Frequency - Poodle

Updated Jun 17, 2024

DLA Class I Haplotype Frequencies

DLA1 #STR typesPoodle (n=5432)
1001380 373 281 1820.26556
1002380 365 281 1810.15961
1003387 375 277 1860.17397
1004393 379 277 1830.08505
1005389 371 277 1810.06839
1006387 375 293 1800.04943
1007380 372 281 1820.03387
1008386 373 289 1820.01279
1009382 377 277 1840.01436
1010384 371 277 1860.01123
1011376 365 281 1800.01961
1012388 369 289 1880.01491
1013392 373 289 1860.00865
1014375 373 287 1780.01095
1015380 373 291 1860.00129
1016382 371 277 1780.02108
1017386 373 289 1780.00249
1018375 373 287 1860.00930
1019380 373 287 1850.00304
1020388 369 289 1840.00295
1021380 373 289 1860.00175
1022380 375 281 1810.00009
1023380 379 281 1810.00009
1024387 373 281 1820.00009
1025380 365 281 1860.00018
1026390 369 289 1860.00341
1027391 371 277 1810.00046
1028376 369 291 1860.00110
1029380 365 281 1820.00166
1030380 373 293 1780.00221
1031382 371 277 1860.00129
1032382 377 277 1780.00009
1033382 379 277 1810.00341
1034382 379 277 1820.00055
1035386 373 277 1840.00009
1036389 365 289 1800.00166
1040380 371 277 1860.00055
1043393 381 277 1830.00147
1045376 371 277 1860.00064
1046376 379 291 1800.00037
1052380 372 289 1840.00037
1053382 377 277 1860.00018
1054382 379 277 1840.00018
1065380 371 277 1810.00018
1069380 365 281 1840.00009
1084376 373 277 1840.00028
1092376 379 277 1810.00018
1093386 379 277 1800.00046
1102389 375 293 1800.00009
1103389 375 293 1810.00018
1105382 379 277 1780.00377
1106395 379 277 1780.00009
1107376 375 293 1830.00018
1109381 379 291 1860.00156
1111387 378 287 1820.00009
1130380 373 287 1780.00009
1134384 365 291 1780.00018
1141380 365 281 1800.00018
1168382 379 289 1860.00018
1169380 365 277 1800.00101
1225387 374 287 1860.00009
1234380 371 281 1810.00018
1265387 375 277 1840.00009
1270376 365 281 1810.00009
1271387 375 277 1810.00018
1279393 379 277 1860.00009

DLA Class II Haplotype Frequencies

DLA2 #STR typesPoodle (n=5432)
2001343 324 2840.59785
2002343 327 2800.08643
2003343 324 2820.10521
2004351 327 2680.03019
2005339 322 2800.01556
2006339 325 2800.03387
2007351 327 2800.01749
2008339 327 2760.01445
2009351 324 2800.00727
2010345 329 2800.01123
2011345 322 2840.01970
2012345 322 2800.00755
2013345 327 2840.01049
2014339 322 2840.01924
2015339 327 2800.00414
2016339 323 2840.00322
2017343 322 2800.00212
2019345 324 2840.00009
2020349 324 2840.00018
2021339 324 2680.00387
2022339 327 2820.00046
2023341 323 2820.00221
2024343 323 2800.00064
2025351 321 2800.00166
2026351 324 2840.00101
2028345 327 2880.00055
2032339 323 2800.00046
2035341 323 2800.00009
2037341 327 2800.00046
2039345 327 2760.00055
2040345 327 2800.00009
2048339 331 2820.00018
2050341 327 2840.00009
2053343 324 2800.00009
2064351 327 2840.00092
2066339 324 2800.00009
2101341 324 2800.00018
2115343 327 2840.00009

Allele Frequencies

#Locus NameAllelePoodle (n=5433)
1AHT121 920.01242
940.02236
960.01270
980.31658
1000.08651
1020.00635
1040.19694
1060.08209
1080.17302
1100.06727
1120.02338
1140.00028
1160.00009
2AHT137 1310.23067
1330.01013
1350.00046
1370.17572
1390.00046
1410.36708
1430.01307
1450.04704
1470.05762
1490.00221
1510.09536
1530.00018
3AHTH130 1110.01688
1170.00242
1190.38211
1210.14037
1230.07825
1250.00112
1270.13234
1290.21647
1310.01539
1330.01250
1350.00215
4AHTh171-A 2170.00626
2190.36996
2210.23311
2230.00626
2250.14329
2270.00911
2290.04887
2310.02080
2330.00110
2350.14173
2370.01951
5AHTh260 2380.57144
2400.03047
2420.00028
2440.05837
2460.18956
2480.06491
2500.03388
2520.03655
2540.00635
2560.00819
6AHTk211 870.18397
890.03911
910.67246
930.00396
950.10031
970.00018
7AHTk253 2800.00911
2840.12921
2860.11375
2880.40659
2900.21397
2920.12663
2960.00074
8C22.279 1160.08062
1180.39960
1200.00469
1240.35726
1260.06838
1280.02135
1300.06801
1340.00009
9FH2001 1240.02053
1320.42313
1360.07153
1400.01823
1440.24130
1480.21129
1520.01280
1580.00120
10FH2054 1480.01003
1520.03212
1560.55035
1600.01758
1640.00359
1680.29658
1720.07760
1760.01114
1800.00101
11FH2848 2300.01565
2320.01574
2340.01224
2360.05266
2380.13791
2400.68809
2420.07715
2440.00018
2460.00037
12INRA21 910.35597
930.00009
950.40245
970.04721
990.05540
1010.11439
1030.00755
1050.01390
1090.00304
13INU005 1100.01997
1200.00009
1220.00055
1240.51334
1260.44874
1280.00184
1300.01196
1320.00110
1380.00239
14INU030 1440.31990
1460.14992
1480.06488
1500.08761
1520.37650
1540.00083
1560.00028
1580.00009
15INU055 2080.00166
2100.21968
2120.05927
2140.29523
2160.36830
2180.03930
2200.01528
2220.00129
16LEI004 850.65378
950.10169
970.00479
1050.00074
1070.20734
1090.03166
17REN105L03 2270.01040
2310.27734
2330.19836
2350.00764
2370.01519
2390.01215
2410.47865
2430.00028
18REN162C04 2000.02043
2020.17056
2040.06747
2060.54446
2080.09030
2100.06499
2120.04179
19REN169D01 2020.00987
2100.00120
2120.07102
2140.00092
2160.40860
2180.25918
2200.00184
2220.05054
2240.17432
2260.02251
20REN169O18 1560.00129
1600.03351
1620.56747
1640.31581
1660.01657
1680.02421
1700.03268
1720.00847
21REN247M23 2660.03415
2680.52633
2700.23362
2720.19864
2740.00249
2780.00479
22REN54P11 2220.00313
2260.26634
2280.16685
2300.00359
2320.33582
2340.20974
2360.00423
2380.00948
2420.00083
23REN64E19 1390.00239
1430.00525
1450.42601
1470.24701
1490.03488
1530.25768
1550.02678
24VGL0760 120.29520
130.00120
140.01427
150.00828
180.00156
190.08505
19.20.13954
200.03645
20.20.16246
210.00129
21.20.05412
22.20.01657
23.20.10963
24.20.05955
25.20.01436
26.20.00046
25VGL0910 120.00046
130.04767
140.01712
150.01896
15.10.01565
160.00018
16.10.00497
17.10.10574
18.10.27361
190.00009
19.10.13133
20.10.04040
21.10.27830
220.00727
22.10.02282
230.03037
23.10.00387
240.00120
26VGL1063 80.02807
90.00230
100.00009
110.00166
120.03460
130.16317
140.13869
150.08577
160.09884
170.03065
180.04417
190.29726
200.04160
210.02476
220.00672
230.00156
240.00009
27VGL1165 130.00009
140.00009
150.00663
160.04243
170.00387
180.01831
190.00939
200.00083
210.07905
220.00313
230.00285
240.01537
250.11476
25.30.00009
260.47718
270.10906
280.10887
290.00230
300.00433
310.00101
320.00028
340.00009
28VGL1828 140.03746
150.00055
160.04721
170.02292
180.08807
190.42628
200.33701
210.03341
220.00699
230.00009
29VGL2009 90.45141
100.00607
110.03534
120.04740
130.24388
140.18765
150.02807
160.00018
30VGL2409 130.03931
140.26505
150.18707
160.15319
170.19582
180.13579
190.02329
200.00046
31VGL2918 70.00009
120.00515
130.11384
140.20560
150.15783
160.04261
16.30.00147
170.00221
17.30.03230
18.30.02172
19.30.11826
20.30.11863
21.30.14228
22.30.03479
23.30.00322
32VGL3008 120.00009
130.01150
140.03414
150.23412
160.03792
170.50193
180.02558
18.20.00018
190.12903
200.02301
210.00239
230.00009
33VGL3235 120.15351
130.04933
140.15664
150.04666
160.30158
170.22161
180.06957
190.00110

Standard genetic assessment based on 33 autosomal STR loci

Poodle

  NNaNeHoHeF
Mean543310.0913.7340.6800.7000.030
 SE 0.6450.2290.0170.0170.003

Standard genetic assessment based on 7 STRs in the DLA region

Poodle

  NNaNeHoHeF
Mean54338.7142.9990.5830.6050.036
 SE 1.1730.4670.0570.0590.006

Standard genetic assessment for individual STR loci

Poodle

#LocusNNaNeHoHeF
1AHT1215433135.2880.7950.8110.019
2AHT1375433124.2780.7530.7660.017
3AHTH1305433114.2210.7350.7630.037
4AHTh171-A5433114.2520.7560.7650.011
5AHTh2605433102.6770.6070.6260.030
6AHTk211543362.0090.4740.5020.057
7AHTk253543373.8930.7360.7430.010
8C22.279543383.2940.7070.696-0.015
9FH2001543383.4730.6930.7120.026
10FH2054543392.5100.6000.6020.002
11FH2848543391.9930.4730.4980.050
12INRA21543393.2540.6700.6930.033
13INU005543392.1480.5110.5350.045
14INU030543383.5910.6920.7220.042
15INU055543383.6180.7120.7240.016
16LEI004543362.0760.5140.5180.008
17REN105L03543382.8910.6220.6540.050
18REN162C04543372.9020.6190.6550.056
19REN169D015433103.6670.6870.7270.055
20REN169O18543382.3540.5500.5750.043
21REN247M23543362.6860.5980.6280.047
22REN54P11543393.9110.6990.7440.061
23REN64E19543373.2170.6670.6890.032
24VGL07605433166.2180.8280.8390.013
25VGL09105433185.3450.8060.8130.008
26VGL10635433176.3040.8170.8410.029
27VGL11655433223.6570.6890.7270.052
28VGL18285433103.2430.6710.6920.029
29VGL2009543383.3030.6620.6970.051
30VGL2409543385.3310.8030.8120.011
31VGL29185433157.5170.8580.8670.010
32VGL30085433123.0550.6630.6730.015
33VGL3235543385.0600.7760.8020.033

Standard genetic assessment for 7 STRs in the DLA region

Poodle

#LocusNNaNeHoHeF
1DLA I-3CCA5433153.4580.6850.7110.036
2DLA I-4ACA5433114.8150.7730.7920.024
3DLA I-4BCT543362.5710.5870.6110.040
4DLA1131543394.6560.7570.7850.036
55ACA543361.5550.3510.3570.015
65ACT543381.8330.4420.4540.027
75BCA543362.1040.4860.5250.073