Updated Jan 21, 2025
DLA Class I Haplotype Frequencies
DLA1 # | STR types | Poodle (n=5638) |
---|---|---|
1001 | 380 373 281 182 | 0.26614 |
1002 | 380 365 281 181 | 0.16061 |
1003 | 387 375 277 186 | 0.17444 |
1004 | 393 379 277 183 | 0.08372 |
1005 | 389 371 277 181 | 0.06926 |
1006 | 387 375 293 180 | 0.04949 |
1007 | 380 372 281 182 | 0.03335 |
1008 | 386 373 289 182 | 0.01233 |
1009 | 382 377 277 184 | 0.01490 |
1010 | 384 371 277 186 | 0.01126 |
1011 | 376 365 281 180 | 0.01933 |
1012 | 388 369 289 188 | 0.01463 |
1013 | 392 373 289 186 | 0.00851 |
1014 | 375 373 287 178 | 0.01082 |
1015 | 380 373 291 186 | 0.00124 |
1016 | 382 371 277 178 | 0.02128 |
1017 | 386 373 289 178 | 0.00239 |
1018 | 375 373 287 186 | 0.00984 |
1019 | 380 373 287 185 | 0.00293 |
1020 | 388 369 289 184 | 0.00284 |
1021 | 380 373 289 186 | 0.00177 |
1022 | 380 375 281 181 | 0.00009 |
1023 | 380 379 281 181 | 0.00009 |
1024 | 387 373 281 182 | 0.00009 |
1025 | 380 365 281 186 | 0.00018 |
1026 | 390 369 289 186 | 0.00328 |
1027 | 391 371 277 181 | 0.00044 |
1028 | 376 369 291 186 | 0.00106 |
1029 | 380 365 281 182 | 0.00160 |
1030 | 380 373 293 178 | 0.00213 |
1031 | 382 371 277 186 | 0.00124 |
1032 | 382 377 277 178 | 0.00009 |
1033 | 382 379 277 181 | 0.00337 |
1034 | 382 379 277 182 | 0.00053 |
1035 | 386 373 277 184 | 0.00009 |
1036 | 389 365 289 180 | 0.00160 |
1040 | 380 371 277 186 | 0.00053 |
1043 | 393 381 277 183 | 0.00142 |
1045 | 376 371 277 186 | 0.00062 |
1046 | 376 379 291 180 | 0.00035 |
1052 | 380 372 289 184 | 0.00035 |
1053 | 382 377 277 186 | 0.00018 |
1054 | 382 379 277 184 | 0.00018 |
1065 | 380 371 277 181 | 0.00018 |
1069 | 380 365 281 184 | 0.00009 |
1084 | 376 373 277 184 | 0.00027 |
1092 | 376 379 277 181 | 0.00018 |
1093 | 386 379 277 180 | 0.00044 |
1102 | 389 375 293 180 | 0.00009 |
1103 | 389 375 293 181 | 0.00018 |
1105 | 382 379 277 178 | 0.00372 |
1106 | 395 379 277 178 | 0.00009 |
1107 | 376 375 293 183 | 0.00018 |
1109 | 381 379 291 186 | 0.00151 |
1111 | 387 378 287 182 | 0.00009 |
1130 | 380 373 287 178 | 0.00009 |
1134 | 384 365 291 178 | 0.00018 |
1141 | 380 365 281 180 | 0.00018 |
1168 | 382 379 289 186 | 0.00018 |
1169 | 380 365 277 180 | 0.00098 |
1225 | 387 374 287 186 | 0.00009 |
1234 | 380 371 281 181 | 0.00018 |
1265 | 387 375 277 184 | 0.00009 |
1270 | 376 365 281 181 | 0.00009 |
1271 | 387 375 277 181 | 0.00018 |
1279 | 393 379 277 186 | 0.00009 |
null | 0.00009 |
DLA Class II Haplotype Frequencies
DLA2 # | STR types | Poodle (n=5638) |
---|---|---|
2001 | 343 324 284 | 0.60048 |
2002 | 343 327 280 | 0.08505 |
2003 | 343 324 282 | 0.10598 |
2004 | 351 327 268 | 0.03068 |
2005 | 339 322 280 | 0.01499 |
2006 | 339 325 280 | 0.03335 |
2007 | 351 327 280 | 0.01712 |
2008 | 339 327 276 | 0.01499 |
2009 | 351 324 280 | 0.00701 |
2010 | 345 329 280 | 0.01126 |
2011 | 345 322 284 | 0.01942 |
2012 | 345 322 280 | 0.00727 |
2013 | 345 327 284 | 0.01029 |
2014 | 339 322 284 | 0.01924 |
2015 | 339 327 280 | 0.00399 |
2016 | 339 323 284 | 0.00310 |
2017 | 343 322 280 | 0.00213 |
2019 | 345 324 284 | 0.00009 |
2020 | 349 324 284 | 0.00018 |
2021 | 339 324 268 | 0.00381 |
2022 | 339 327 282 | 0.00044 |
2023 | 341 323 282 | 0.00213 |
2024 | 343 323 280 | 0.00062 |
2025 | 351 321 280 | 0.00160 |
2026 | 351 324 284 | 0.00098 |
2028 | 345 327 288 | 0.00053 |
2032 | 339 323 280 | 0.00044 |
2035 | 341 323 280 | 0.00009 |
2037 | 341 327 280 | 0.00044 |
2039 | 345 327 276 | 0.00053 |
2040 | 345 327 280 | 0.00009 |
2048 | 339 331 282 | 0.00018 |
2050 | 341 327 284 | 0.00018 |
2053 | 343 324 280 | 0.00009 |
2064 | 351 327 284 | 0.00089 |
2066 | 339 324 280 | 0.00009 |
2101 | 341 324 280 | 0.00018 |
2115 | 343 327 284 | 0.00009 |
Allele Frequencies
# | Locus Name | Allele | Poodle (n=5640) |
---|---|---|---|
1 | AHT121 | 92 | 0.01259 |
94 | 0.02243 | ||
96 | 0.01232 | ||
98 | 0.31646 | ||
100 | 0.08530 | ||
102 | 0.00638 | ||
104 | 0.19773 | ||
106 | 0.08326 | ||
108 | 0.17237 | ||
110 | 0.06703 | ||
112 | 0.02323 | ||
114 | 0.00080 | ||
116 | 0.00009 | ||
2 | AHT137 | 131 | 0.23231 |
133 | 0.01037 | ||
135 | 0.00044 | ||
137 | 0.17547 | ||
139 | 0.00044 | ||
141 | 0.36576 | ||
143 | 0.01321 | ||
145 | 0.04620 | ||
147 | 0.05834 | ||
149 | 0.00257 | ||
151 | 0.09461 | ||
153 | 0.00027 | ||
3 | AHTH130 | 111 | 0.01688 |
117 | 0.00233 | ||
119 | 0.37967 | ||
121 | 0.14143 | ||
123 | 0.07821 | ||
125 | 0.00117 | ||
127 | 0.13353 | ||
129 | 0.21677 | ||
131 | 0.01536 | ||
133 | 0.01257 | ||
135 | 0.00207 | ||
4 | AHTh171-A | 217 | 0.00603 |
219 | 0.37063 | ||
221 | 0.23071 | ||
223 | 0.00630 | ||
225 | 0.14151 | ||
227 | 0.00904 | ||
229 | 0.04930 | ||
231 | 0.02181 | ||
233 | 0.00151 | ||
235 | 0.14373 | ||
237 | 0.01942 | ||
5 | AHTh260 | 238 | 0.57352 |
240 | 0.03122 | ||
242 | 0.00027 | ||
244 | 0.05889 | ||
246 | 0.18730 | ||
248 | 0.06421 | ||
250 | 0.03379 | ||
252 | 0.03663 | ||
254 | 0.00630 | ||
256 | 0.00789 | ||
6 | AHTk211 | 87 | 0.18345 |
89 | 0.03928 | ||
91 | 0.67388 | ||
93 | 0.00408 | ||
95 | 0.09913 | ||
97 | 0.00018 | ||
7 | AHTk253 | 280 | 0.00887 |
284 | 0.12759 | ||
286 | 0.11358 | ||
288 | 0.40504 | ||
290 | 0.21449 | ||
292 | 0.12972 | ||
296 | 0.00071 | ||
8 | C22.279 | 116 | 0.08033 |
118 | 0.40078 | ||
120 | 0.00470 | ||
124 | 0.35591 | ||
126 | 0.06827 | ||
128 | 0.02155 | ||
130 | 0.06836 | ||
134 | 0.00009 | ||
9 | FH2001 | 124 | 0.01978 |
132 | 0.42869 | ||
136 | 0.07105 | ||
140 | 0.01809 | ||
144 | 0.23976 | ||
148 | 0.20898 | ||
152 | 0.01251 | ||
158 | 0.00115 | ||
10 | FH2054 | 148 | 0.01055 |
152 | 0.03157 | ||
156 | 0.55188 | ||
160 | 0.01756 | ||
164 | 0.00346 | ||
168 | 0.29603 | ||
172 | 0.07724 | ||
176 | 0.01073 | ||
180 | 0.00098 | ||
11 | FH2848 | 230 | 0.01526 |
232 | 0.01579 | ||
234 | 0.01260 | ||
236 | 0.05340 | ||
238 | 0.13704 | ||
240 | 0.68893 | ||
242 | 0.07646 | ||
244 | 0.00018 | ||
246 | 0.00035 | ||
12 | INRA21 | 91 | 0.35467 |
93 | 0.00009 | ||
95 | 0.40362 | ||
97 | 0.04761 | ||
99 | 0.05533 | ||
101 | 0.11438 | ||
103 | 0.00745 | ||
105 | 0.01392 | ||
109 | 0.00293 | ||
13 | INU005 | 110 | 0.01977 |
120 | 0.00009 | ||
122 | 0.00053 | ||
124 | 0.51419 | ||
126 | 0.44840 | ||
128 | 0.00186 | ||
130 | 0.01170 | ||
132 | 0.00115 | ||
138 | 0.00231 | ||
14 | INU030 | 144 | 0.32337 |
146 | 0.14923 | ||
148 | 0.06508 | ||
150 | 0.08689 | ||
152 | 0.37427 | ||
154 | 0.00080 | ||
156 | 0.00027 | ||
158 | 0.00009 | ||
15 | INU055 | 208 | 0.00160 |
210 | 0.21888 | ||
212 | 0.05922 | ||
214 | 0.29406 | ||
216 | 0.37030 | ||
218 | 0.03936 | ||
220 | 0.01534 | ||
222 | 0.00124 | ||
16 | LEI004 | 85 | 0.65402 |
95 | 0.10108 | ||
97 | 0.00488 | ||
105 | 0.00071 | ||
107 | 0.20677 | ||
109 | 0.03254 | ||
17 | REN105L03 | 227 | 0.01020 |
231 | 0.27930 | ||
233 | 0.19684 | ||
235 | 0.00745 | ||
237 | 0.01507 | ||
239 | 0.01170 | ||
241 | 0.47916 | ||
243 | 0.00027 | ||
18 | REN162C04 | 200 | 0.02049 |
202 | 0.17054 | ||
204 | 0.06846 | ||
206 | 0.54443 | ||
208 | 0.08930 | ||
210 | 0.06394 | ||
212 | 0.04275 | ||
214 | 0.00009 | ||
19 | REN169D01 | 202 | 0.00977 |
210 | 0.00133 | ||
212 | 0.07036 | ||
214 | 0.00089 | ||
216 | 0.41089 | ||
218 | 0.25773 | ||
220 | 0.00195 | ||
222 | 0.05064 | ||
224 | 0.17440 | ||
226 | 0.02203 | ||
20 | REN169O18 | 156 | 0.00124 |
160 | 0.03405 | ||
162 | 0.56579 | ||
164 | 0.31513 | ||
166 | 0.01747 | ||
168 | 0.02412 | ||
170 | 0.03290 | ||
172 | 0.00931 | ||
21 | REN247M23 | 266 | 0.03387 |
268 | 0.52784 | ||
270 | 0.23249 | ||
272 | 0.19862 | ||
274 | 0.00257 | ||
278 | 0.00461 | ||
22 | REN54P11 | 222 | 0.00319 |
226 | 0.26663 | ||
228 | 0.16670 | ||
230 | 0.00399 | ||
232 | 0.33481 | ||
234 | 0.20961 | ||
236 | 0.00417 | ||
238 | 0.01011 | ||
242 | 0.00080 | ||
23 | REN64E19 | 139 | 0.00239 |
143 | 0.00505 | ||
145 | 0.42730 | ||
147 | 0.24690 | ||
149 | 0.03520 | ||
153 | 0.25700 | ||
155 | 0.02615 | ||
24 | VGL0760 | 12 | 0.29730 |
13 | 0.00124 | ||
14 | 0.01383 | ||
15 | 0.00842 | ||
18 | 0.00151 | ||
19 | 0.08486 | ||
19.2 | 0.14045 | ||
20 | 0.03644 | ||
20.2 | 0.16111 | ||
21 | 0.00133 | ||
21.2 | 0.05373 | ||
22.2 | 0.01694 | ||
23.2 | 0.10862 | ||
24.2 | 0.05967 | ||
25.2 | 0.01410 | ||
26.2 | 0.00044 | ||
25 | VGL0910 | 12 | 0.00044 |
13 | 0.04867 | ||
14 | 0.01720 | ||
15 | 0.01888 | ||
15.1 | 0.01587 | ||
16 | 0.00027 | ||
16.1 | 0.00479 | ||
17.1 | 0.10754 | ||
18.1 | 0.27190 | ||
19 | 0.00009 | ||
19.1 | 0.13005 | ||
20.1 | 0.04229 | ||
21.1 | 0.27624 | ||
22 | 0.00727 | ||
22.1 | 0.02314 | ||
23 | 0.03041 | ||
23.1 | 0.00372 | ||
24 | 0.00124 | ||
26 | VGL1063 | 8 | 0.02810 |
9 | 0.00222 | ||
10 | 0.00009 | ||
11 | 0.00160 | ||
12 | 0.03440 | ||
13 | 0.16277 | ||
14 | 0.13856 | ||
15 | 0.08723 | ||
16 | 0.09796 | ||
17 | 0.03236 | ||
18 | 0.04379 | ||
19 | 0.29707 | ||
20 | 0.04078 | ||
21 | 0.02491 | ||
22 | 0.00656 | ||
23 | 0.00151 | ||
24 | 0.00009 | ||
27 | VGL1165 | 13 | 0.00009 |
14 | 0.00018 | ||
15 | 0.00647 | ||
16 | 0.04255 | ||
17 | 0.00399 | ||
18 | 0.01853 | ||
19 | 0.00913 | ||
20 | 0.00080 | ||
21 | 0.07881 | ||
22 | 0.00301 | ||
23 | 0.00284 | ||
24 | 0.01587 | ||
25 | 0.11356 | ||
25.3 | 0.00009 | ||
26 | 0.47704 | ||
27 | 0.10842 | ||
28 | 0.11055 | ||
29 | 0.00222 | ||
30 | 0.00452 | ||
31 | 0.00098 | ||
32 | 0.00027 | ||
34 | 0.00009 | ||
28 | VGL1828 | 14 | 0.03741 |
15 | 0.00053 | ||
16 | 0.04672 | ||
17 | 0.02287 | ||
18 | 0.08723 | ||
19 | 0.42580 | ||
20 | 0.33892 | ||
21 | 0.03342 | ||
22 | 0.00700 | ||
23 | 0.00009 | ||
29 | VGL2009 | 9 | 0.45337 |
10 | 0.00638 | ||
11 | 0.03457 | ||
12 | 0.04654 | ||
13 | 0.24415 | ||
14 | 0.18661 | ||
15 | 0.02819 | ||
16 | 0.00018 | ||
30 | VGL2409 | 13 | 0.03929 |
14 | 0.26392 | ||
15 | 0.18499 | ||
16 | 0.15396 | ||
17 | 0.19936 | ||
18 | 0.13436 | ||
19 | 0.02368 | ||
20 | 0.00044 | ||
31 | VGL2918 | 7 | 0.00009 |
12 | 0.00505 | ||
13 | 0.11410 | ||
14 | 0.20603 | ||
15 | 0.15736 | ||
16 | 0.04291 | ||
16.3 | 0.00142 | ||
17 | 0.00222 | ||
17.3 | 0.03191 | ||
18.3 | 0.02190 | ||
19.3 | 0.11897 | ||
20.3 | 0.11746 | ||
21.3 | 0.14220 | ||
22.3 | 0.03502 | ||
23.3 | 0.00337 | ||
32 | VGL3008 | 12 | 0.00009 |
13 | 0.01161 | ||
14 | 0.03369 | ||
15 | 0.23493 | ||
16 | 0.03812 | ||
17 | 0.50133 | ||
18 | 0.02544 | ||
18.2 | 0.00018 | ||
19 | 0.12837 | ||
20 | 0.02385 | ||
21 | 0.00230 | ||
23 | 0.00009 | ||
33 | VGL3235 | 12 | 0.15455 |
13 | 0.04948 | ||
14 | 0.15907 | ||
15 | 0.04682 | ||
16 | 0.29934 | ||
17 | 0.22043 | ||
18 | 0.06925 | ||
19 | 0.00106 |
Standard genetic assessment based on 33 autosomal STR loci
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 5640 | 10.121 | 3.734 | 0.680 | 0.700 | 0.030 | |
SE | 0.641 | 0.230 | 0.017 | 0.017 | 0.003 |
Standard genetic assessment based on 7 STRs in the DLA region
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 5640 | 8.714 | 2.990 | 0.583 | 0.604 | 0.034 | |
SE | 1.173 | 0.467 | 0.058 | 0.059 | 0.007 |
Standard genetic assessment for individual STR loci
Poodle
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | AHT121 | 5640 | 13 | 5.290 | 0.794 | 0.811 | 0.021 |
2 | AHT137 | 5640 | 12 | 4.286 | 0.755 | 0.767 | 0.015 |
3 | AHTH130 | 5640 | 11 | 4.241 | 0.737 | 0.764 | 0.036 |
4 | AHTh171-A | 5640 | 11 | 4.260 | 0.755 | 0.765 | 0.014 |
5 | AHTh260 | 5640 | 10 | 2.666 | 0.606 | 0.625 | 0.029 |
6 | AHTk211 | 5640 | 6 | 2.003 | 0.473 | 0.501 | 0.056 |
7 | AHTk253 | 5640 | 7 | 3.904 | 0.737 | 0.744 | 0.009 |
8 | C22.279 | 5640 | 8 | 3.294 | 0.704 | 0.696 | -0.011 |
9 | FH2001 | 5640 | 8 | 3.438 | 0.689 | 0.709 | 0.028 |
10 | FH2054 | 5640 | 9 | 2.502 | 0.600 | 0.600 | 0.001 |
11 | FH2848 | 5640 | 9 | 1.989 | 0.472 | 0.497 | 0.050 |
12 | INRA21 | 5640 | 9 | 3.253 | 0.667 | 0.693 | 0.038 |
13 | INU005 | 5640 | 9 | 2.146 | 0.511 | 0.534 | 0.043 |
14 | INU030 | 5640 | 8 | 3.588 | 0.690 | 0.721 | 0.044 |
15 | INU055 | 5640 | 8 | 3.613 | 0.711 | 0.723 | 0.017 |
16 | LEI004 | 5640 | 6 | 2.076 | 0.514 | 0.518 | 0.008 |
17 | REN105L03 | 5640 | 8 | 2.883 | 0.621 | 0.653 | 0.049 |
18 | REN162C04 | 5640 | 8 | 2.903 | 0.621 | 0.656 | 0.053 |
19 | REN169D01 | 5640 | 10 | 3.653 | 0.685 | 0.726 | 0.057 |
20 | REN169O18 | 5640 | 8 | 2.366 | 0.553 | 0.577 | 0.042 |
21 | REN247M23 | 5640 | 6 | 2.679 | 0.597 | 0.627 | 0.048 |
22 | REN54P11 | 5640 | 9 | 3.921 | 0.700 | 0.745 | 0.060 |
23 | REN64E19 | 5640 | 7 | 3.210 | 0.669 | 0.688 | 0.029 |
24 | VGL0760 | 5640 | 16 | 6.188 | 0.827 | 0.838 | 0.014 |
25 | VGL0910 | 5640 | 18 | 5.396 | 0.808 | 0.815 | 0.008 |
26 | VGL1063 | 5640 | 17 | 6.312 | 0.820 | 0.842 | 0.026 |
27 | VGL1165 | 5640 | 22 | 3.660 | 0.690 | 0.727 | 0.050 |
28 | VGL1828 | 5640 | 10 | 3.236 | 0.668 | 0.691 | 0.033 |
29 | VGL2009 | 5640 | 8 | 3.288 | 0.660 | 0.696 | 0.052 |
30 | VGL2409 | 5640 | 8 | 5.334 | 0.805 | 0.813 | 0.010 |
31 | VGL2918 | 5640 | 15 | 7.518 | 0.859 | 0.867 | 0.010 |
32 | VGL3008 | 5640 | 12 | 3.059 | 0.662 | 0.673 | 0.017 |
33 | VGL3235 | 5640 | 8 | 5.081 | 0.775 | 0.803 | 0.035 |
Standard genetic assessment for 7 STRs in the DLA region
Poodle
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | DLA I-3CCA | 5640 | 15 | 3.449 | 0.687 | 0.710 | 0.033 |
2 | DLA I-4ACA | 5640 | 11 | 4.806 | 0.775 | 0.792 | 0.021 |
3 | DLA I-4BCT | 5640 | 6 | 2.565 | 0.588 | 0.610 | 0.036 |
4 | DLA1131 | 5640 | 9 | 4.645 | 0.760 | 0.785 | 0.031 |
5 | 5ACA | 5640 | 6 | 1.548 | 0.349 | 0.354 | 0.014 |
6 | 5ACT | 5640 | 8 | 1.820 | 0.439 | 0.451 | 0.026 |
7 | 5BCA | 5640 | 6 | 2.098 | 0.485 | 0.523 | 0.074 |