Statistics and Breed-wide Allele Frequency - Poodle

Updated May 17, 2021

DLA Class I Haplotype Frequencies

DLA1 #STR typesPoodle (n=3804)
1001380 373 281 1820.2733
1002380 365 281 1810.1663
1003387 375 277 1860.1684
1004393 379 277 1830.0839
1005389 371 277 1810.0643
1006387 375 293 1800.0482
1007380 372 281 1820.0338
1008386 373 289 1820.0145
1009382 377 277 1840.0162
1010384 371 277 1860.0110
1011376 365 281 1800.0188
1012388 369 289 1880.0133
1013392 373 289 1860.0096
1014375 373 287 1780.0093
1015380 373 291 1860.0018
1016382 371 277 1780.0213
1017386 373 289 1780.0028
1018375 373 287 1860.0087
1019380 373 287 1850.0032
1020388 369 289 1840.0041
1021380 373 289 1860.0021
1022380 375 281 1810.0001
1023380 379 281 1810.0001
1024387 373 281 1820.0001
1025380 365 281 1860.0003
1026390 369 289 1860.0025
1027391 371 277 1810.0007
1028376 369 291 1860.0011
1029380 365 281 1820.0021
1030380 373 293 1780.0022
1031382 371 277 1860.0013
1032382 377 277 1780.0001
1033382 379 277 1810.0020
1034382 379 277 1820.0001
1035386 373 277 1840.0001
1036389 365 289 1800.0020
1040380 371 277 1860.0005
1043393 381 277 1830.0018
1045376 371 277 1860.0009
1046376 379 291 1800.0004
1053382 377 277 1860.0003
1092376 379 277 1810.0003
1102389 375 293 1800.0001
1103389 375 293 1810.0003
1105382 379 277 1780.0029
1106395 379 277 1780.0001
1107376 375 293 1830.0001
1109381 379 291 1860.0001
1111387 378 287 1820.0001
1134384 365 291 1780.0003
1141380 365 281 1800.0003
1169380 365 277 1800.0013
1220387 375 277 1780.0001
1225387 374 287 1860.0001
1234380 371 281 1810.0003
1265387 375 277 1840.0001

DLA Class II Haplotype Frequencies

DLA2 #STR typesPoodle (n=3804)
2001343 324 2840.6048
2002343 327 2800.0856
2003343 324 2820.0983
2004351 327 2680.0301
2005339 322 2800.0176
2006339 325 2800.0338
2007351 327 2800.0163
2008339 327 2760.0162
2009351 324 2800.0100
2010345 329 2800.0110
2011345 322 2840.0189
2012345 322 2800.0058
2013345 327 2840.0092
2014339 322 2840.0195
2015339 327 2800.0051
2016339 323 2840.0033
2017343 322 2800.0021
2019345 324 2840.0001
2020349 324 2840.0003
2021339 324 2680.0032
2022339 327 2820.0001
2023341 323 2820.0022
2024343 323 2800.0003
2025351 321 2800.0020
2026351 324 2840.0011
2028345 327 2880.0005
2035341 323 2800.0001
2037341 327 2800.0001
2039345 327 2760.0008
2040345 327 2800.0001
2064351 327 2840.0011
2066339 324 2800.0001
2101341 324 2800.0003
2115343 327 2840.0001

Allele Frequencies

#Locus NameAllelePoodle (n=3810)
1AHT121 920.0110
940.0221
960.0127
980.3276
1000.0866
1020.0051
1040.1907
1060.0755
1080.1808
1100.0664
1120.0211
1140.0003
2AHT137 1310.2346
1330.0100
1350.0001
1370.1692
1390.0007
1410.3728
1430.0109
1450.0486
1470.0563
1490.0025
1510.0943
1530.0001
3AHTH130 1110.0163
1170.0017
1190.3961
1210.1378
1230.0788
1250.0001
1270.1239
1290.2136
1310.0158
1330.0128
1350.0031
4AHTh171-A 2170.0083
2190.3672
2210.2427
2230.0075
2250.1466
2270.0080
2290.0471
2310.0188
2330.0009
2350.1345
2370.0184
5AHTh260 2380.5759
2400.0290
2420.0003
2440.0494
2460.1994
2480.0666
2500.0301
2520.0370
2540.0046
2560.0077
6AHTk211 870.1873
890.0390
910.6692
930.0018
950.1024
970.0003
7AHTk253 2800.0119
2840.1248
2860.1041
2880.4127
2900.2190
2920.1273
2960.0001
8C22.279 1160.0810
1180.4054
1200.0035
1240.3644
1260.0612
1280.0243
1300.0601
1340.0001
9FH2001 1240.0179
1320.4278
1360.0650
1400.0204
1440.2436
1480.2125
1520.0114
1580.0014
10FH2054 1480.0100
1520.0294
1560.5532
1600.0177
1640.0021
1680.2928
1720.0836
1760.0097
1800.0014
11FH2848 2300.0130
2320.0176
2340.0122
2360.0482
2380.1358
2400.6942
2420.0787
2440.0001
2460.0001
12INRA21 910.3644
930.0001
950.4056
970.0437
990.0575
1010.1075
1030.0059
1050.0133
1090.0020
13INU005 1100.0173
1200.0001
1220.0001
1240.5077
1260.4589
1280.0021
1300.0106
1320.0003
1380.0028
14INU030 1440.3152
1460.1473
1480.0658
1500.0870
1520.3834
1540.0008
1560.0004
1580.0001
15INU055 2080.0011
2100.2184
2120.0593
2140.2977
2160.3757
2180.0345
2200.0117
2220.0016
16LEI004 850.6619
950.0936
970.0018
1050.0009
1070.2115
1090.0303
17REN105L03 2270.0085
2310.2636
2330.2066
2350.0062
2370.0134
2390.0119
2410.4894
2430.0004
18REN162C04 2000.0217
2020.1696
2040.0636
2060.5513
2080.0893
2100.0667
2120.0378
19REN169D01 2020.0078
2100.0013
2120.0732
2140.0013
2160.4080
2180.2705
2200.0018
2220.0424
2240.1723
2260.0213
20REN169O18 1560.0004
1600.0339
1620.5813
1640.3131
1660.0131
1680.0234
1700.0274
1720.0075
21REN247M23 2660.0382
2680.5186
2700.2323
2720.2033
2740.0028
2780.0047
22REN54P11 2220.0017
2260.2536
2280.1737
2300.0021
2320.3384
2340.2178
2360.0034
2380.0085
2420.0008
23REN64E19 1390.0020
1430.0063
1450.4182
1470.2528
1490.0335
1530.2620
1550.0252
24VGL0760 120.3006
130.0009
140.0137
150.0110
180.0016
190.0864
19.20.1296
200.0349
20.20.1682
210.0018
21.20.0503
22.20.0169
23.20.1070
24.20.0603
25.20.0162
26.20.0004
25VGL0910 120.0007
130.0495
140.0158
150.0165
15.10.0134
160.0001
16.10.0054
17.10.1066
18.10.2790
190.0001
19.10.1346
20.10.0370
21.10.2763
220.0071
22.10.0219
230.0298
23.10.0051
240.0009
26VGL1063 80.0263
90.0032
100.0001
110.0014
120.0337
130.1585
140.1384
150.0712
160.1019
170.0343
180.0429
190.3083
200.0412
210.0274
220.0088
230.0022
240.0001
27VGL1165 130.0001
140.0001
150.0076
160.0436
170.0012
180.0144
190.0102
200.0009
210.0830
220.0020
230.0032
240.0177
250.1134
25.30.0001
260.4748
270.1078
280.1123
290.0029
300.0037
310.0004
320.0004
340.0001
28VGL1828 140.0376
150.0005
160.0485
170.0205
180.0868
190.4413
200.3237
210.0356
220.0055
230.0001
29VGL2009 90.4483
100.0054
110.0345
120.0463
130.2447
140.1903
150.0303
160.0001
30VGL2409 130.0343
140.2662
150.1951
160.1445
170.1950
180.1377
190.0269
200.0004
31VGL2918 70.0001
120.0064
130.1060
140.2086
150.1636
160.0466
16.30.0014
170.0022
17.30.0323
18.30.0193
19.30.1146
20.30.1238
21.30.1366
22.30.0345
23.30.0038
32VGL3008 120.0001
130.0092
140.0356
150.2312
160.0334
170.5125
180.0243
18.20.0001
190.1287
200.0223
210.0026
33VGL3235 120.1589
130.0491
140.1470
150.0397
160.3126
170.2251
180.0665
190.0012

Standard genetic assessment based on 33 autosomal STR loci

Poodle

  NNaNeHoHeF
Mean381010.0303.6850.6750.6970.031
 SE 0.6390.2260.0180.0170.004

Standard genetic assessment based on 7 STRs in the DLA region

Poodle

  NNaNeHoHeF
Mean38108.5712.9500.5800.6010.034
 SE 1.1930.4550.0570.0580.007

Standard genetic assessment for individual STR loci

Poodle

#LocusNNaNeHoHeF
1AHT1213810125.1210.7810.8050.029
2AHT1373810124.2150.7470.7630.020
3AHTH1303810114.1030.7280.7560.037
4AHTh171-A3810114.2300.7510.7640.016
5AHTh2603810102.6210.5960.6190.036
6AHTk211381062.0200.4680.5050.073
7AHTk253381073.8310.7340.7390.007
8C22.279381083.2090.7020.688-0.020
9FH2001381083.4180.6840.7070.033
10FH2054381092.4990.6020.600-0.004
11FH2848381091.9620.4610.4900.060
12INRA21381093.1820.6720.6860.021
13INU005381092.1330.5060.5310.047
14INU030381083.5720.6940.7200.036
15INU055381083.5420.7010.7180.023
16LEI004381062.0310.5050.5080.004
17REN105L03381082.8400.6140.6480.052
18REN162C04381072.8480.6100.6490.060
19REN169D013810103.6100.6860.7230.051
20REN169O18381082.2800.5280.5610.060
21REN247M23381062.7340.6110.6340.036
22REN54P11381093.8980.7000.7430.059
23REN64E19381073.2330.6680.6910.032
24VGL07603810166.1480.8270.8370.012
25VGL09103810185.2720.8050.8100.006
26VGL10633810176.1670.8130.8380.029
27VGL11653810223.6760.6910.7280.051
28VGL18283810103.2000.6650.6870.032
29VGL2009381083.3190.6560.6990.061
30VGL2409381085.3010.7970.8110.017
31VGL29183810157.4910.8510.8670.017
32VGL30083810112.9740.6590.6640.008
33VGL3235381084.9110.7740.7960.029

Standard genetic assessment for 7 STRs in the DLA region

Poodle

#LocusNNaNeHoHeF
1DLA I-3CCA3810153.3290.6770.7000.032
2DLA I-4ACA3810114.7340.7680.7890.027
3DLA I-4BCT381062.5400.5880.6060.029
4DLA1131381094.5880.7570.7820.032
55ACA381061.5590.3520.3590.019
65ACT381071.8240.4420.4520.022
75BCA381062.0780.4780.5190.078