Statistics and Breed-wide Allele Frequency - Poodle

Updated Dec 1, 2022

DLA Class I Haplotype Frequencies

DLA1 #STR typesPoodle (n=4857)
1001380 373 281 1820.2676
1002380 365 281 1810.1603
1003387 375 277 1860.1714
1004393 379 277 1830.0859
1005389 371 277 1810.0680
1006387 375 293 1800.0474
1007380 372 281 1820.0335
1008386 373 289 1820.0137
1009382 377 277 1840.0150
1010384 371 277 1860.0118
1011376 365 281 1800.0195
1012388 369 289 1880.0142
1013392 373 289 1860.0085
1014375 373 287 1780.0115
1015380 373 291 1860.0014
1016382 371 277 1780.0221
1017386 373 289 1780.0027
1018375 373 287 1860.0086
1019380 373 287 1850.0034
1020388 369 289 1840.0033
1021380 373 289 1860.0019
1022380 375 281 1810.0001
1023380 379 281 1810.0001
1024387 373 281 1820.0001
1025380 365 281 1860.0002
1026390 369 289 1860.0034
1027391 371 277 1810.0005
1028376 369 291 1860.0009
1029380 365 281 1820.0018
1030380 373 293 1780.0022
1031382 371 277 1860.0010
1032382 377 277 1780.0001
1033382 379 277 1810.0032
1034382 379 277 1820.0002
1035386 373 277 1840.0001
1036389 365 289 1800.0016
1040380 371 277 1860.0006
1043393 381 277 1830.0014
1045376 371 277 1860.0007
1046376 379 291 1800.0003
1052380 372 289 1840.0003
1053382 377 277 1860.0002
1054382 379 277 1840.0002
1065380 371 277 1810.0002
1084376 373 277 1840.0003
1092376 379 277 1810.0002
1093386 379 277 1800.0005
1102389 375 293 1800.0001
1103389 375 293 1810.0002
1105382 379 277 1780.0037
1106395 379 277 1780.0001
1107376 375 293 1830.0001
1109381 379 291 1860.0008
1111387 378 287 1820.0001
1130380 373 287 1780.0001
1134384 365 291 1780.0002
1141380 365 281 1800.0002
1168382 379 289 1860.0001
1169380 365 277 1800.0011
1225387 374 287 1860.0001
1234380 371 281 1810.0002
1265387 375 277 1840.0001
1270376 365 281 1810.0001
1271387 375 277 1810.0002
1279393 379 277 1860.0001

DLA Class II Haplotype Frequencies

DLA2 #STR typesPoodle (n=4857)
2001343 324 2840.5974
2002343 327 2800.0872
2003343 324 2820.1032
2004351 327 2680.0286
2005339 322 2800.0167
2006339 325 2800.0335
2007351 327 2800.0170
2008339 327 2760.0150
2009351 324 2800.0080
2010345 329 2800.0118
2011345 322 2840.0196
2012345 322 2800.0067
2013345 327 2840.0111
2014339 322 2840.0205
2015339 327 2800.0043
2016339 323 2840.0035
2017343 322 2800.0022
2019345 324 2840.0001
2020349 324 2840.0002
2021339 324 2680.0038
2022339 327 2820.0005
2023341 323 2820.0022
2024343 323 2800.0003
2025351 321 2800.0016
2026351 324 2840.0010
2028345 327 2880.0006
2032339 323 2800.0005
2035341 323 2800.0001
2037341 327 2800.0005
2039345 327 2760.0006
2040345 327 2800.0001
2048339 331 2820.0002
2064351 327 2840.0009
2066339 324 2800.0001
2101341 324 2800.0002
2115343 327 2840.0001

Allele Frequencies

#Locus NameAllelePoodle (n=4861)
1AHT121 920.0121
940.0233
960.0127
980.3186
1000.0874
1020.0062
1040.1953
1060.0804
1080.1741
1100.0660
1120.0236
1140.0002
2AHT137 1310.2295
1330.0109
1350.0001
1370.1751
1390.0005
1410.3716
1430.0119
1450.0479
1470.0561
1490.0023
1510.0938
1530.0002
3AHTH130 1110.0172
1170.0024
1190.3889
1210.1355
1230.0780
1250.0003
1270.1304
1290.2166
1310.0155
1330.0127
1350.0024
4AHTh171-A 2170.0068
2190.3673
2210.2355
2230.0061
2250.1467
2270.0091
2290.0481
2310.0195
2330.0011
2350.1392
2370.0206
5AHTh260 2380.5737
2400.0283
2420.0003
2440.0577
2460.1896
2480.0651
2500.0342
2520.0363
2540.0061
2560.0086
6AHTk211 870.1856
890.0387
910.6719
930.0034
950.1002
970.0002
7AHTk253 2800.0099
2840.1286
2860.1116
2880.4059
2900.2168
2920.1268
2960.0004
8C22.279 1160.0798
1180.4001
1200.0040
1240.3612
1260.0671
1280.0216
1300.0660
1340.0001
9FH2001 1240.0200
1320.4220
1360.0702
1400.0183
1440.2424
1480.2129
1520.0129
1580.0013
10FH2054 1480.0110
1520.0301
1560.5509
1600.0169
1640.0027
1680.2957
1720.0806
1760.0110
1800.0011
11FH2848 2300.0136
2320.0165
2340.0116
2360.0521
2380.1399
2400.6890
2420.0769
2440.0001
2460.0004
12INRA21 910.3544
930.0001
950.4023
970.0463
990.0580
1010.1145
1030.0074
1050.0143
1090.0028
13INU005 1100.0184
1200.0001
1220.0006
1240.5139
1260.4507
1280.0020
1300.0118
1320.0003
1380.0022
14INU030 1440.3189
1460.1485
1480.0642
1500.0873
1520.3799
1540.0008
1560.0003
1580.0001
15INU055 2080.0015
2100.2194
2120.0604
2140.2959
2160.3688
2180.0380
2200.0147
2220.0013
16LEI004 850.6574
950.0978
970.0040
1050.0008
1070.2090
1090.0310
17REN105L03 2270.0101
2310.2745
2330.2019
2350.0073
2370.0153
2390.0113
2410.4792
2430.0003
18REN162C04 2000.0214
2020.1726
2040.0651
2060.5457
2080.0906
2100.0657
2120.0390
19REN169D01 2020.0092
2100.0012
2120.0721
2140.0010
2160.4087
2180.2637
2200.0017
2220.0468
2240.1732
2260.0224
20REN169O18 1560.0014
1600.0342
1620.5729
1640.3146
1660.0149
1680.0230
1700.0310
1720.0079
21REN247M23 2660.0355
2680.5197
2700.2385
2720.1993
2740.0025
2780.0045
22REN54P11 2220.0020
2260.2606
2280.1695
2300.0023
2320.3387
2340.2120
2360.0045
2380.0097
2420.0007
23REN64E19 1390.0021
1430.0057
1450.4196
1470.2509
1490.0353
1530.2589
1550.0277
24VGL0760 120.2963
130.0008
140.0143
150.0090
180.0015
190.0872
19.20.1365
200.0356
20.20.1642
210.0014
21.20.0513
22.20.0162
23.20.1107
24.20.0595
25.20.0149
26.20.0005
25VGL0910 120.0005
130.0474
140.0172
150.0195
15.10.0146
160.0001
16.10.0050
17.10.1054
18.10.2768
190.0001
19.10.1315
20.10.0385
21.10.2775
220.0072
22.10.0225
230.0309
23.10.0042
240.0010
26VGL1063 80.0265
90.0026
100.0001
110.0013
120.0343
130.1557
140.1407
150.0825
160.0995
170.0311
180.0437
190.3042
200.0430
210.0258
220.0072
230.0017
240.0001
27VGL1165 130.0001
140.0001
150.0068
160.0429
170.0030
180.0171
190.0094
200.0008
210.0797
220.0029
230.0028
240.0164
250.1150
25.30.0001
260.4743
270.1113
280.1102
290.0023
300.0042
310.0004
320.0003
340.0001
28VGL1828 140.0368
150.0004
160.0492
170.0217
180.0869
190.4312
200.3338
210.0334
220.0065
230.0001
29VGL2009 90.4501
100.0050
110.0359
120.0482
130.2444
140.1874
150.0287
160.0002
30VGL2409 130.0399
140.2635
150.1907
160.1521
170.1922
180.1362
190.0248
200.0005
31VGL2918 70.0001
120.0056
130.1083
140.2109
150.1612
160.0428
16.30.0015
170.0024
17.30.0331
18.30.0206
19.30.1163
20.30.1189
21.30.1390
22.30.0362
23.30.0032
32VGL3008 120.0001
130.0111
140.0352
150.2343
160.0376
170.5033
180.0242
18.20.0002
190.1274
200.0243
210.0022
230.0001
33VGL3235 120.1552
130.0488
140.1534
150.0448
160.3045
170.2242
180.0682
190.0009

Standard genetic assessment based on 33 autosomal STR loci

Poodle

  NNaNeHoHeF
Mean486110.0613.7210.6790.6990.031
 SE 0.6410.2270.0170.0170.004

Standard genetic assessment based on 7 STRs in the DLA region

Poodle

  NNaNeHoHeF
Mean48618.7142.9940.5840.6050.035
 SE 1.1730.4650.0570.0580.007

Standard genetic assessment for individual STR loci

Poodle

#LocusNNaNeHoHeF
1AHT1214861125.2670.7880.8100.027
2AHT1374861124.2380.7500.7640.019
3AHTH1304861114.1610.7270.7600.043
4AHTh171-A4861114.2630.7550.7650.013
5AHTh2604861102.6590.6040.6240.032
6AHTk211486162.0100.4700.5030.064
7AHTk253486173.8920.7350.7430.010
8C22.279486183.2650.7070.694-0.020
9FH2001486183.4720.6900.7120.031
10FH2054486192.5070.6010.6010.000
11FH2848486191.9860.4710.4970.052
12INRA21486193.2650.6750.6940.027
13INU005486192.1380.5050.5320.051
14INU030486183.5740.6920.7200.039
15INU055486183.6100.7120.7230.016
16LEI004486162.0560.5120.5140.002
17REN105L03486182.8880.6160.6540.057
18REN162C04486172.8880.6220.6540.049
19REN169D014861103.6420.6870.7250.053
20REN169O18486182.3250.5400.5700.053
21REN247M23486162.7180.6060.6320.041
22REN54P11486193.8990.7010.7440.057
23REN64E19486173.2460.6700.6920.032
24VGL07604861166.1930.8300.8390.010
25VGL09104861185.3130.8030.8120.010
26VGL10634861176.2270.8140.8390.030
27VGL11654861223.6810.6900.7280.052
28VGL18284861103.2230.6700.6900.028
29VGL2009486183.3120.6590.6980.056
30VGL2409486185.3570.8060.8130.009
31VGL29184861157.4700.8570.8660.011
32VGL30084861123.0450.6620.6720.014
33VGL3235486185.0090.7700.8000.038

Standard genetic assessment for 7 STRs in the DLA region

Poodle

#LocusNNaNeHoHeF
1DLA I-3CCA4861153.4450.6860.7100.033
2DLA I-4ACA4861114.8010.7700.7920.027
3DLA I-4BCT486162.5590.5870.6090.036
4DLA1131486194.6540.7580.7850.035
55ACA486161.5620.3550.3600.012
65ACT486181.8400.4450.4570.024
75BCA486162.0950.4850.5230.073