Statistics and Breed-wide Allele Frequency - Poodle

Updated Apr 14, 2024

DLA Class I Haplotype Frequencies

DLA1 #STR typesPoodle (n=5334)
1001380 373 281 1820.26687
1002380 365 281 1810.15936
1003387 375 277 1860.17482
1004393 379 277 1830.08390
1005389 371 277 1810.06721
1006387 375 293 1800.04837
1007380 372 281 1820.03421
1008386 373 289 1820.01294
1009382 377 277 1840.01453
1010384 371 277 1860.01144
1011376 365 281 1800.01978
1012388 369 289 1880.01500
1013392 373 289 1860.00881
1014375 373 287 1780.01106
1015380 373 291 1860.00131
1016382 371 277 1780.02137
1017386 373 289 1780.00253
1018375 373 287 1860.00900
1019380 373 287 1850.00309
1020388 369 289 1840.00300
1021380 373 289 1860.00178
1022380 375 281 1810.00009
1023380 379 281 1810.00009
1024387 373 281 1820.00009
1025380 365 281 1860.00019
1026390 369 289 1860.00347
1027391 371 277 1810.00047
1028376 369 291 1860.00094
1029380 365 281 1820.00169
1030380 373 293 1780.00225
1031382 371 277 1860.00131
1032382 377 277 1780.00009
1033382 379 277 1810.00347
1034382 379 277 1820.00056
1035386 373 277 1840.00009
1036389 365 289 1800.00159
1040380 371 277 1860.00056
1043393 381 277 1830.00150
1045376 371 277 1860.00066
1046376 379 291 1800.00037
1052380 372 289 1840.00037
1053382 377 277 1860.00019
1054382 379 277 1840.00019
1065380 371 277 1810.00019
1069380 365 281 1840.00009
1084376 373 277 1840.00028
1092376 379 277 1810.00019
1093386 379 277 1800.00047
1102389 375 293 1800.00009
1103389 375 293 1810.00019
1105382 379 277 1780.00375
1106395 379 277 1780.00009
1107376 375 293 1830.00019
1109381 379 291 1860.00131
1111387 378 287 1820.00009
1130380 373 287 1780.00009
1134384 365 291 1780.00019
1141380 365 281 1800.00019
1168382 379 289 1860.00019
1169380 365 277 1800.00103
1225387 374 287 1860.00009
1234380 371 281 1810.00019
1265387 375 277 1840.00009
1270376 365 281 1810.00009
1271387 375 277 1810.00019
1279393 379 277 1860.00009

DLA Class II Haplotype Frequencies

DLA2 #STR typesPoodle (n=5334)
2001343 324 2840.59974
2002343 327 2800.08530
2003343 324 2820.10396
2004351 327 2680.02953
2005339 322 2800.01584
2006339 325 2800.03421
2007351 327 2800.01706
2008339 327 2760.01462
2009351 324 2800.00741
2010345 329 2800.01144
2011345 322 2840.01987
2012345 322 2800.00741
2013345 327 2840.01059
2014339 322 2840.01950
2015339 327 2800.00403
2016339 323 2840.00328
2017343 322 2800.00216
2019345 324 2840.00009
2020349 324 2840.00019
2021339 324 2680.00384
2022339 327 2820.00047
2023341 323 2820.00225
2024343 323 2800.00066
2025351 321 2800.00159
2026351 324 2840.00103
2028345 327 2880.00056
2032339 323 2800.00047
2035341 323 2800.00009
2037341 327 2800.00047
2039345 327 2760.00056
2040345 327 2800.00009
2048339 331 2820.00019
2050341 327 2840.00009
2053343 324 2800.00009
2064351 327 2840.00094
2066339 324 2800.00009
2101341 324 2800.00019
2115343 327 2840.00009

Allele Frequencies

#Locus NameAllelePoodle (n=5342)
1AHT121 920.01235
940.02218
960.01226
980.31776
1000.08686
1020.00627
1040.19599
1060.08246
1080.17306
1100.06730
1120.02321
1140.00019
1160.00009
2AHT137 1310.23048
1330.01030
1350.00037
1370.17600
1390.00047
1410.36753
1430.01301
1450.04709
1470.05608
1490.00225
1510.09624
1530.00019
3AHTH130 1110.01679
1170.00247
1190.38311
1210.13956
1230.07884
1250.00085
1270.13150
1290.21641
1310.01565
1330.01262
1350.00218
4AHTh171-A 2170.00636
2190.36943
2210.23278
2230.00636
2250.14395
2270.00927
2290.04923
2310.02059
2330.00112
2350.14105
2370.01984
5AHTh260 2380.57079
2400.02931
2420.00028
2440.05815
2460.19101
2480.06479
2500.03418
2520.03689
2540.00627
2560.00833
6AHTk211 870.18383
890.03940
910.67259
930.00384
950.10015
970.00019
7AHTk253 2800.00927
2840.12945
2860.11353
2880.40640
2900.21481
2920.12580
2960.00075
8C22.279 1160.08031
1180.39976
1200.00421
1240.35829
1260.06833
1280.02143
1300.06758
1340.00009
9FH2001 1240.02051
1320.42125
1360.07163
1400.01807
1440.24260
1480.21208
1520.01264
1580.00122
10FH2054 1480.01020
1520.03164
1560.54962
1600.01732
1640.00346
1680.29704
1720.07845
1760.01123
1800.00103
11FH2848 2300.01582
2320.01592
2340.01124
2360.05318
2380.13773
2400.68848
2420.07706
2440.00019
2460.00037
12INRA21 910.35408
930.00009
950.40359
970.04717
990.05588
1010.11456
1030.00768
1050.01404
1090.00290
13INU005 1100.01994
1200.00009
1220.00056
1240.51395
1260.44861
1280.00187
1300.01207
1320.00047
1380.00243
14INU030 1440.31861
1460.14966
1480.06486
1500.08742
1520.37823
1540.00084
1560.00028
1580.00009
15INU055 2080.00168
2100.22098
2120.05990
2140.29568
2160.36681
2180.03866
2200.01498
2220.00131
16LEI004 850.65472
950.09968
970.00487
1050.00075
1070.20844
1090.03154
17REN105L03 2270.01058
2310.27598
2330.19949
2350.00721
2370.01517
2390.01208
2410.47922
2430.00028
18REN162C04 2000.02069
2020.17038
2040.06656
2060.54681
2080.09053
2100.06544
2120.03960
19REN169D01 2020.00985
2100.00122
2120.07111
2140.00094
2160.40685
2180.26032
2200.00188
2220.04953
2240.17570
2260.02261
20REN169O18 1560.00131
1600.03314
1620.56946
1640.31474
1660.01666
1680.02359
1700.03248
1720.00861
21REN247M23 2660.03436
2680.52471
2700.23441
2720.19931
2740.00253
2780.00468
22REN54P11 2220.00206
2260.26526
2280.16820
2300.00346
2320.33471
2340.21181
2360.00421
2380.00945
2420.00084
23REN64E19 1390.00234
1430.00534
1450.42643
1470.24691
1490.03416
1530.25768
1550.02714
24VGL0760 120.29657
130.00112
140.01432
150.00843
180.00159
190.08585
19.20.13836
200.03679
20.20.16252
210.00131
21.20.05271
22.20.01629
23.20.10916
24.20.05991
25.20.01460
26.20.00047
25VGL0910 120.00047
130.04792
140.01741
150.01881
15.10.01582
160.00019
16.10.00505
17.10.10595
18.10.27424
190.00009
19.10.12982
20.10.04006
21.10.27920
220.00739
22.10.02200
230.03042
23.10.00393
240.00122
26VGL1063 80.02780
90.00234
100.00009
110.00168
120.03454
130.16033
140.13890
150.08527
160.09903
170.03079
180.04437
190.29951
200.04184
210.02499
220.00683
230.00159
240.00009
27VGL1165 130.00009
140.00009
150.00674
160.04259
170.00337
180.01816
190.00945
200.00075
210.07937
220.00318
230.00271
240.01554
250.11438
25.30.00009
260.47726
270.10932
280.10885
290.00234
300.00431
310.00103
320.00028
340.00009
28VGL1828 140.03772
150.00056
160.04708
170.02190
180.08761
190.42802
200.33648
210.03370
220.00683
230.00009
29VGL2009 90.44983
100.00590
110.03585
120.04764
130.24364
140.18869
150.02827
160.00019
30VGL2409 130.03942
140.26376
150.18801
160.15197
170.19597
180.13708
190.02331
200.00047
31VGL2918 70.00009
120.00524
130.11260
140.20694
150.15865
160.04306
16.30.00150
170.00215
17.30.03238
18.30.02181
19.30.11634
20.30.11906
21.30.14199
22.30.03501
23.30.00318
32VGL3008 120.00009
130.01133
140.03444
150.23418
160.03809
170.50159
180.02518
18.20.00019
190.12907
200.02331
210.00243
230.00009
33VGL3235 120.15294
130.04933
140.15612
150.04577
160.30335
170.22155
180.06982
190.00112

Standard genetic assessment based on 33 autosomal STR loci

Poodle

  NNaNeHoHeF
Mean534210.0913.7310.6800.7000.030
 SE 0.6450.2290.0170.0170.003

Standard genetic assessment based on 7 STRs in the DLA region

Poodle

  NNaNeHoHeF
Mean53428.7142.9900.5840.6040.034
 SE 1.1730.4650.0570.0590.006

Standard genetic assessment for individual STR loci

Poodle

#LocusNNaNeHoHeF
1AHT1215342135.2750.7940.8100.020
2AHT1375342124.2720.7520.7660.018
3AHTH1305342114.2140.7340.7630.038
4AHTh171-A5342114.2610.7560.7650.012
5AHTh2605342102.6780.6090.6270.028
6AHTk211534262.0090.4720.5020.060
7AHTk253534273.8930.7360.7430.010
8C22.279534283.2860.7070.696-0.017
9FH2001534283.4800.6940.7130.026
10FH2054534292.5120.6000.6020.004
11FH2848534291.9910.4730.4980.050
12INRA21534293.2570.6710.6930.031
13INU005534292.1460.5110.5340.042
14INU030534283.5870.6930.7210.039
15INU055534283.6220.7120.7240.017
16LEI004534262.0700.5140.5170.006
17REN105L03534282.8890.6210.6540.050
18REN162C04534272.8820.6190.6530.052
19REN169D015342103.6730.6890.7280.053
20REN169O18534282.3450.5480.5740.044
21REN247M23534262.6940.6010.6290.044
22REN54P11534293.9110.6990.7440.060
23REN64E19534273.2140.6660.6890.033
24VGL07605342166.2000.8280.8390.013
25VGL09105342185.3320.8050.8120.009
26VGL10635342176.2850.8160.8410.029
27VGL11655342223.6560.6880.7260.053
28VGL18285342103.2320.6690.6910.031
29VGL2009534283.3150.6620.6980.051
30VGL2409534285.3390.8050.8130.010
31VGL29185342157.5080.8580.8670.010
32VGL30085342123.0580.6620.6730.016
33VGL3235534285.0440.7760.8020.032

Standard genetic assessment for 7 STRs in the DLA region

Poodle

#LocusNNaNeHoHeF
1DLA I-3CCA5342153.4440.6870.7100.032
2DLA I-4ACA5342114.8020.7730.7920.023
3DLA I-4BCT534262.5640.5880.6100.037
4DLA1131534294.6440.7580.7850.034
55ACA534261.5560.3510.3570.016
65ACT534281.8310.4420.4540.026
75BCA534262.0920.4860.5220.069