Statistics and Breed-wide Allele Frequency - Swedish Vallhund

Updated Nov 20, 2024

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Swedish Vallhund (n=609)
1006	387 375 293 180	0.2307
1009	382 377 277 184	0.0534
1068	380 373 287 181	0.3678
1177	395 373 277 181	0.1675
1178	386 365 277 186	0.1650
1179	395 375 293 180	0.0025
1259	387 373 287 181	0.0131

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Swedish Vallhund (n=609)
2007	351 327 280	0.2332
2022	339 327 282	0.0534
2053	343 324 280	0.5460
2066	339 324 280	0.0008
2084	339 323 268	0.1667

Allele Frequencies

#	Locus Name	Allele	Swedish Vallhund (n=610)
1	AHT121	94	0.1197
		96	0.3025
		98	0.0762
		100	0.4320
		102	0.0648
		106	0.0049
2	AHT137	131	0.3270
		133	0.0205
		135	0.1180
		137	0.5303
		139	0.0016
		147	0.0025
3	AHTH130	119	0.1246
		121	0.0893
		127	0.0623
		129	0.0131
		131	0.0008
		133	0.0016
		135	0.7082
4	AHTh171-A	221	0.6525
		225	0.1541
		227	0.0361
		229	0.0549
		233	0.1025
5	AHTh260	246	0.5402
		248	0.2975
		250	0.0033
		254	0.1590
6	AHTk211	87	0.4172
		89	0.1336
		91	0.4492
7	AHTk253	282	0.1992
		286	0.0664
		288	0.3607
		290	0.0934
		292	0.1902
		294	0.0902
8	C22.279	116	0.3123
		118	0.0016
		124	0.6328
		130	0.0533
9	FH2001	132	0.2393
		140	0.0066
		144	0.6221
		148	0.0705
		152	0.0615
10	FH2054	148	0.1328
		152	0.1287
		156	0.6402
		160	0.0426
		164	0.0033
		172	0.0516
		176	0.0008
11	FH2848	232	0.1639
		236	0.0328
		238	0.1098
		240	0.6754
		244	0.0180
12	INRA21	95	0.0369
		97	0.2320
		99	0.0516
		101	0.6795
13	INU005	122	0.0467
		124	0.9033
		126	0.0500
14	INU030	144	0.2090
		148	0.0451
		150	0.6943
		152	0.0516
15	INU055	210	0.2689
		212	0.0934
		214	0.3574
		216	0.2803
16	LEI004	85	0.1361
		95	0.5254
		97	0.0541
		105	0.1516
		107	0.1328
17	REN105L03	231	0.1205
		233	0.2025
		235	0.1656
		239	0.0926
		241	0.4189
18	REN162C04	200	0.2402
		202	0.2893
		204	0.2066
		206	0.2607
		210	0.0033
19	REN169D01	202	0.2607
		210	0.1041
		216	0.1508
		218	0.4844
20	REN169O18	162	0.6451
		170	0.3508
		174	0.0041
21	REN247M23	268	0.8746
21	REN247M23	272	0.1254
22	REN54P11	226	0.8951
		234	0.0885
		244	0.0164
23	REN64E19	145	0.0754
		147	0.4582
		149	0.4648
		153	0.0016
24	VGL0760	12	0.0680
		14	0.1082
		15	0.0033
		20.2	0.2959
		21.2	0.2893
		22.2	0.0082
		23.2	0.0525
		24.2	0.1746
25	VGL0910	18.1	0.0016
		19.1	0.1393
		20.1	0.4598
		21.1	0.3451
		22.1	0.0525
		23.1	0.0016
26	VGL1063	8	0.0197
		12	0.1287
		13	0.1689
		14	0.0910
		15	0.4467
		16	0.0090
		19	0.0303
		20	0.0738
		21	0.0320
27	VGL1165	18	0.0148
		20	0.4598
		22	0.0008
		23	0.2590
		24	0.0262
		25	0.1492
		26	0.0902
28	VGL1828	15	0.0016
		16	0.0467
		17	0.2303
		18	0.0008
		19	0.6189
		20	0.1016
29	VGL2009	13	0.1230
		14	0.0197
		15	0.6574
		16	0.1943
		17	0.0057
30	VGL2409	14	0.2590
		15	0.0016
		16	0.4426
		17	0.2943
		18	0.0016
		19	0.0008
31	VGL2918	13	0.2049
		14	0.6738
		15	0.0369
		17.3	0.0008
		18.3	0.0434
		19.3	0.0377
		20.3	0.0025
32	VGL3008	16	0.2426
		17	0.4959
		18	0.1861
		19	0.0139
		20	0.0615
33	VGL3235	14	0.5836
		15	0.0844
		16	0.0074
		17	0.0156
		18	0.3090

Standard genetic assessment based on 33 autosomal STR loci

Swedish Vallhund

		N	Na	Ne	Ho	He	F
	Mean	610	5.091	2.584	0.563	0.568	0.010
	SE		0.269	0.147	0.026	0.026	0.007

Standard genetic assessment based on 7 STRs in the DLA region

Swedish Vallhund

		N	Na	Ne	Ho	He	F
	Mean	610	3.571	2.643	0.615	0.597	-0.031
	SE		0.275	0.246	0.043	0.041	0.008

Standard genetic assessment for individual STR loci

Swedish Vallhund

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	610	6	3.307	0.661	0.698	0.053
2	AHT137	610	6	2.484	0.564	0.597	0.056
3	AHTH130	610	7	1.890	0.498	0.471	-0.058
4	AHTh171-A	610	5	2.154	0.549	0.536	-0.025
5	AHTh260	610	4	2.465	0.600	0.594	-0.009
6	AHTk211	610	3	2.540	0.621	0.606	-0.025
7	AHTk253	610	6	4.402	0.793	0.773	-0.027
8	C22.279	610	4	1.997	0.477	0.499	0.044
9	FH2001	610	5	2.207	0.544	0.547	0.005
10	FH2054	610	7	2.230	0.590	0.552	-0.070
11	FH2848	610	5	2.014	0.503	0.503	0.000
12	INRA21	610	4	1.925	0.477	0.480	0.007
13	INU005	610	3	1.219	0.164	0.179	0.086
14	INU030	610	4	1.885	0.480	0.470	-0.023
15	INU055	610	4	3.480	0.682	0.713	0.043
16	LEI004	610	5	2.958	0.623	0.662	0.059
17	REN105L03	610	5	3.746	0.764	0.733	-0.042
18	REN162C04	610	5	3.968	0.708	0.748	0.053
19	REN169D01	610	4	2.974	0.643	0.664	0.032
20	REN169O18	610	3	1.855	0.446	0.461	0.032
21	REN247M23	610	2	1.281	0.218	0.219	0.006
22	REN54P11	610	3	1.236	0.185	0.191	0.029
23	REN64E19	610	4	2.317	0.580	0.568	-0.021
24	VGL0760	610	8	4.526	0.779	0.779	0.000
25	VGL0910	610	6	2.835	0.621	0.647	0.040
26	VGL1063	610	9	3.835	0.741	0.739	-0.002
27	VGL1165	610	7	3.228	0.707	0.690	-0.024
28	VGL1828	610	6	2.229	0.543	0.551	0.016
29	VGL2009	610	5	2.060	0.523	0.515	-0.016
30	VGL2409	610	6	2.860	0.652	0.650	-0.003
31	VGL2918	610	7	1.997	0.495	0.499	0.009
32	VGL3008	610	5	2.912	0.657	0.657	-0.001
33	VGL3235	610	5	2.255	0.493	0.556	0.113

Standard genetic assessment for 7 STRs in the DLA region

Swedish Vallhund

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	610	5	3.941	0.780	0.746	-0.046
2	DLA I-4ACA	610	4	2.592	0.616	0.614	-0.004
3	DLA I-4BCT	610	3	2.869	0.693	0.651	-0.064
4	DLA1131	610	4	2.592	0.616	0.614	-0.004
5	5ACA	610	3	2.493	0.615	0.599	-0.027
6	5ACT	610	3	2.447	0.607	0.591	-0.026
7	5BCA	610	3	1.566	0.379	0.362	-0.047

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Swedish Vallhund

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Swedish Vallhund

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Connect with us on social media