Statistics and Breed-wide Allele Frequency - Swedish Vallhund

Updated Feb 1, 2025

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Swedish Vallhund (n=619)
1006	387 375 293 180	0.2286
1009	382 377 277 184	0.0525
1068	380 373 287 181	0.3667
1177	395 373 277 181	0.1704
1178	386 365 277 186	0.1664
1179	395 375 293 180	0.0024
1259	387 373 287 181	0.0129

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Swedish Vallhund (n=619)
2007	351 327 280	0.2310
2022	339 327 282	0.0525
2053	343 324 280	0.5460
2066	339 324 280	0.0008
2084	339 323 268	0.1696

Allele Frequencies

#	Locus Name	Allele	Swedish Vallhund (n=622)
1	AHT121	94	0.1190
		96	0.3039
		98	0.0804
		100	0.4277
		102	0.0635
		106	0.0056
2	AHT137	131	0.3272
		133	0.0201
		135	0.1190
		137	0.5297
		139	0.0016
		147	0.0024
3	AHTH130	119	0.1222
		121	0.0884
		127	0.0643
		129	0.0129
		131	0.0008
		133	0.0016
		135	0.7098
4	AHTh171-A	221	0.6543
		225	0.1527
		227	0.0354
		229	0.0571
		233	0.1005
5	AHTh260	246	0.5402
		248	0.2974
		250	0.0032
		254	0.1592
6	AHTk211	87	0.4156
		89	0.1318
		91	0.4526
7	AHTk253	282	0.1961
		286	0.0659
		288	0.3650
		290	0.0941
		292	0.1897
		294	0.0892
8	C22.279	116	0.3095
		118	0.0016
		124	0.6326
		130	0.0563
9	FH2001	132	0.2387
		140	0.0064
		144	0.6230
		148	0.0691
		152	0.0627
10	FH2054	148	0.1310
		152	0.1262
		156	0.6407
		160	0.0450
		164	0.0032
		172	0.0531
		176	0.0008
11	FH2848	232	0.1683
		236	0.0322
		238	0.1095
		240	0.6683
		244	0.0217
12	INRA21	95	0.0362
		97	0.2339
		99	0.0506
		101	0.6793
13	INU005	122	0.0466
		124	0.9043
		126	0.0490
14	INU030	144	0.2082
		148	0.0450
		150	0.6961
		152	0.0506
15	INU055	210	0.2645
		212	0.0949
		214	0.3577
		216	0.2830
16	LEI004	85	0.1350
		95	0.5297
		97	0.0531
		105	0.1503
		107	0.1318
17	REN105L03	231	0.1182
		233	0.2034
		235	0.1656
		239	0.0908
		241	0.4220
18	REN162C04	200	0.2444
		202	0.2902
		204	0.2034
		206	0.2588
		210	0.0032
19	REN169D01	202	0.2613
		210	0.1021
		216	0.1503
		218	0.4863
20	REN169O18	162	0.6447
		170	0.3513
		174	0.0040
21	REN247M23	268	0.8730
21	REN247M23	272	0.1270
22	REN54P11	226	0.8963
		234	0.0876
		244	0.0161
23	REN64E19	145	0.0740
		147	0.4582
		149	0.4662
		153	0.0016
24	VGL0760	12	0.0667
		14	0.1101
		15	0.0032
		20.2	0.2998
		21.2	0.2886
		22.2	0.0080
		23.2	0.0514
		24.2	0.1720
25	VGL0910	18.1	0.0016
		19.1	0.1431
		20.1	0.4606
		21.1	0.3416
		22.1	0.0514
		23.1	0.0016
26	VGL1063	8	0.0193
		12	0.1310
		13	0.1664
		14	0.0916
		15	0.4469
		16	0.0088
		19	0.0297
		20	0.0748
		21	0.0314
27	VGL1165	18	0.0145
		20	0.4598
		22	0.0008
		23	0.2605
		24	0.0257
		25	0.1463
		26	0.0924
28	VGL1828	15	0.0016
		16	0.0458
		17	0.2307
		18	0.0008
		19	0.6214
		20	0.0997
29	VGL2009	13	0.1254
		14	0.0193
		15	0.6592
		16	0.1905
		17	0.0056
30	VGL2409	14	0.2588
		15	0.0016
		16	0.4469
		17	0.2902
		18	0.0016
		19	0.0008
31	VGL2918	13	0.2034
		14	0.6768
		15	0.0362
		17.3	0.0008
		18.3	0.0426
		19.3	0.0378
		20.3	0.0024
32	VGL3008	16	0.2436
		17	0.4984
		18	0.1841
		19	0.0137
		20	0.0603
33	VGL3235	14	0.5836
		15	0.0828
		16	0.0072
		17	0.0153
		18	0.3111

Standard genetic assessment based on 33 autosomal STR loci

Swedish Vallhund

		N	Na	Ne	Ho	He	F
	Mean	622	5.091	2.579	0.563	0.568	0.009
	SE		0.269	0.146	0.026	0.026	0.007

Standard genetic assessment based on 7 STRs in the DLA region

Swedish Vallhund

		N	Na	Ne	Ho	He	F
	Mean	622	3.571	2.645	0.617	0.597	-0.033
	SE		0.275	0.246	0.042	0.040	0.007

Standard genetic assessment for individual STR loci

Swedish Vallhund

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	622	6	3.334	0.667	0.700	0.047
2	AHT137	622	6	2.486	0.569	0.598	0.048
3	AHTH130	622	7	1.884	0.497	0.469	-0.059
4	AHTh171-A	622	5	2.145	0.545	0.534	-0.021
5	AHTh260	622	4	2.465	0.605	0.594	-0.017
6	AHTk211	622	3	2.532	0.619	0.605	-0.023
7	AHTk253	622	6	4.371	0.789	0.771	-0.024
8	C22.279	622	4	2.003	0.482	0.501	0.037
9	FH2001	622	5	2.203	0.540	0.546	0.011
10	FH2054	622	7	2.230	0.588	0.552	-0.067
11	FH2848	622	5	2.047	0.510	0.512	0.002
12	INRA21	622	4	1.923	0.477	0.480	0.005
13	INU005	622	3	1.216	0.162	0.178	0.086
14	INU030	622	4	1.878	0.477	0.467	-0.021
15	INU055	622	4	3.485	0.688	0.713	0.035
16	LEI004	622	5	2.927	0.619	0.658	0.060
17	REN105L03	622	5	3.716	0.759	0.731	-0.038
18	REN162C04	622	5	3.964	0.712	0.748	0.047
19	REN169D01	622	4	2.960	0.643	0.662	0.029
20	REN169O18	622	3	1.855	0.449	0.461	0.027
21	REN247M23	622	2	1.285	0.222	0.222	-0.000
22	REN54P11	622	3	1.233	0.183	0.189	0.029
23	REN64E19	622	4	2.311	0.577	0.567	-0.018
24	VGL0760	622	8	4.503	0.780	0.778	-0.002
25	VGL0910	622	6	2.841	0.624	0.648	0.037
26	VGL1063	622	9	3.833	0.744	0.739	-0.007
27	VGL1165	622	7	3.225	0.701	0.690	-0.016
28	VGL1828	622	6	2.215	0.542	0.549	0.012
29	VGL2009	622	5	2.054	0.519	0.513	-0.012
30	VGL2409	622	6	2.849	0.650	0.649	-0.001
31	VGL2918	622	7	1.984	0.492	0.496	0.008
32	VGL3008	622	5	2.895	0.656	0.655	-0.002
33	VGL3235	622	5	2.250	0.490	0.555	0.117

Standard genetic assessment for 7 STRs in the DLA region

Swedish Vallhund

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	622	5	3.952	0.781	0.747	-0.046
2	DLA I-4ACA	622	4	2.584	0.619	0.613	-0.010
3	DLA I-4BCT	622	3	2.866	0.690	0.651	-0.059
4	DLA1131	622	4	2.584	0.619	0.613	-0.010
5	5ACA	622	3	2.496	0.617	0.599	-0.029
6	5ACT	622	3	2.458	0.609	0.593	-0.027
7	5BCA	622	3	1.573	0.382	0.364	-0.047

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Swedish Vallhund

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Swedish Vallhund

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Connect with us on social media