Statistics and Breed-wide Allele Frequency - Flat Coated Retriever

Updated May 12, 2024

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Flat Coated Retriever (n=892)
1017	386 373 289 178	0.4484
1033	382 379 277 181	0.0129
1035	386 373 277 184	0.0045
1054	382 379 277 184	0.0970
1055	386 373 289 180	0.0006
1065	380 371 277 181	0.0006
1066	376 375 277 178	0.0006
1067	376 373 277 178	0.0006
1068	380 373 287 181	0.2713
1092	376 379 277 181	0.0011
1142	376 379 277 180	0.1418
1143	386 373 287 181	0.0039
1170	386 373 277 180	0.0006
1171	380 373 287 184	0.0129
1199	380 373 285 181	0.0034

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Flat Coated Retriever (n=892)
2003	343 324 282	0.1452
2005	339 322 280	0.4204
2014	339 322 284	0.0286
2017	343 322 280	0.0006
2018	339 324 284	0.1418
2022	339 327 282	0.1132
2046	339 329 280	0.0006
2048	339 331 282	0.0006
2053	343 324 280	0.1463
2066	339 324 280	0.0006
2083	339 324 282	0.0022

Allele Frequencies

#	Locus Name	Allele	Flat Coated Retriever (n=892)
1	AHT121	94	0.0006
		96	0.1441
		98	0.0376
		100	0.0017
		102	0.4580
		104	0.3498
		106	0.0056
		108	0.0028
2	AHT137	131	0.2057
		133	0.0006
		137	0.5050
		147	0.1446
		149	0.1401
		151	0.0039
3	AHTH130	121	0.4563
		125	0.0207
		127	0.3201
		129	0.2024
		135	0.0006
4	AHTh171-A	219	0.7685
		221	0.1693
		225	0.0510
		227	0.0101
		237	0.0011
5	AHTh260	240	0.4933
		242	0.0006
		244	0.0078
		246	0.4854
		248	0.0129
6	AHTk211	89	0.0006
		91	0.2663
		93	0.1872
		95	0.0645
		97	0.4815
7	AHTk253	280	0.2248
		286	0.0432
		288	0.1037
		292	0.6239
		294	0.0006
		296	0.0039
8	C22.279	116	0.4815
		118	0.2063
		120	0.2679
		122	0.0006
		126	0.0437
9	FH2001	124	0.0090
		132	0.6357
		136	0.0706
		140	0.0258
		144	0.0006
		148	0.0247
		152	0.2315
		156	0.0022
10	FH2054	148	0.0006
		152	0.0914
		156	0.2315
		160	0.0168
		164	0.6429
		168	0.0123
		172	0.0045
11	FH2848	232	0.0689
		234	0.0045
		236	0.0022
		238	0.6373
		240	0.1480
		242	0.1390
12	INRA21	91	0.0095
		95	0.2321
		97	0.1541
		99	0.2237
		101	0.3800
		103	0.0006
13	INU005	124	0.1256
		126	0.3761
		128	0.4983
14	INU030	144	0.7730
		148	0.0006
		150	0.2265
15	INU055	210	0.7960
		214	0.1424
		218	0.0605
		220	0.0011
16	LEI004	95	0.8997
		97	0.0521
		105	0.0017
		107	0.0460
		109	0.0006
17	REN105L03	231	0.0123
		233	0.4512
		235	0.4692
		241	0.0673
18	REN162C04	200	0.1160
		202	0.5191
		204	0.0017
		206	0.0959
		208	0.2674
19	REN169D01	202	0.0768
		210	0.0073
		212	0.2803
		214	0.0886
		216	0.3464
		218	0.1967
		220	0.0039
20	REN169O18	156	0.0006
		160	0.0011
		162	0.2663
		164	0.2848
		166	0.0011
		168	0.1452
		170	0.2220
		174	0.0790
21	REN247M23	268	0.4725
		270	0.5263
		272	0.0006
		278	0.0006
22	REN54P11	222	0.2539
		226	0.4709
		242	0.0022
		244	0.2730
23	REN64E19	143	0.0157
		145	0.0348
		147	0.3677
		149	0.2909
		153	0.2909
24	VGL0760	12	0.0129
		13	0.0056
		17.2	0.0011
		18	0.0028
		18.2	0.0067
		19	0.0717
		19.2	0.4428
		20	0.0039
		20.2	0.0460
		21	0.0717
		21.2	0.2528
		22	0.0123
		22.2	0.0667
		23	0.0006
		23.2	0.0022
25	VGL0910	14	0.0185
		15	0.1003
		16	0.0028
		18.1	0.0202
		19.1	0.3722
		20.1	0.0443
		21.1	0.1300
		22.1	0.2825
		23.1	0.0291
26	VGL1063	11	0.0017
		13	0.1009
		14	0.1099
		15	0.0852
		16	0.0078
		17	0.0594
		18	0.0684
		19	0.4933
		20	0.0734
27	VGL1165	20	0.1553
		21	0.0067
		22	0.3890
		23	0.0078
		26	0.0067
		27	0.2063
		28	0.1592
		29	0.0689
28	VGL1828	15	0.0191
		16	0.9652
		17	0.0146
		19	0.0006
		20	0.0006
29	VGL2009	10	0.0011
		11	0.0050
		12	0.0006
		13	0.8004
		14	0.0757
		15	0.1166
		16	0.0006
30	VGL2409	13	0.0740
		15	0.0135
		16	0.8716
		17	0.0398
		18	0.0011
31	VGL2918	12	0.0583
		13	0.5398
		14	0.0807
		15	0.0006
		17.3	0.0471
		18.3	0.0090
		19.3	0.1598
		20.3	0.0953
		21.3	0.0095
32	VGL3008	14	0.0006
		17	0.0028
		18	0.0258
		19	0.7052
		20	0.2478
		21	0.0179
33	VGL3235	12	0.2943
		14	0.0488
		15	0.1065
		16	0.4613
		17	0.0460
		18	0.0006
		19	0.0426

Standard genetic assessment based on 33 autosomal STR loci

Flat Coated Retriever

		N	Na	Ne	Ho	He	F
	Mean	892	6.182	2.595	0.553	0.559	0.011
	SE		0.396	0.154	0.030	0.031	0.005

Standard genetic assessment based on 7 STRs in the DLA region

Flat Coated Retriever

		N	Na	Ne	Ho	He	F
	Mean	892	3.714	2.455	0.554	0.567	0.022
	SE		0.333	0.214	0.042	0.043	0.005

Standard genetic assessment for individual STR loci

Flat Coated Retriever

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	892	8	2.823	0.628	0.646	0.028
2	AHT137	892	6	2.959	0.631	0.662	0.047
3	AHTH130	892	5	2.841	0.643	0.648	0.007
4	AHTh171-A	892	5	1.608	0.390	0.378	-0.032
5	AHTh260	892	5	2.087	0.522	0.521	-0.003
6	AHTk211	892	5	2.924	0.635	0.658	0.036
7	AHTk253	892	6	2.211	0.520	0.548	0.050
8	C22.279	892	5	2.873	0.664	0.652	-0.018
9	FH2001	892	8	2.155	0.556	0.536	-0.037
10	FH2054	892	7	2.102	0.518	0.524	0.012
11	FH2848	892	6	2.211	0.543	0.548	0.010
12	INRA21	892	6	3.674	0.719	0.728	0.013
13	INU005	892	3	2.466	0.610	0.594	-0.026
14	INU030	892	3	1.541	0.357	0.351	-0.015
15	INU055	892	4	1.521	0.324	0.343	0.054
16	LEI004	892	5	1.228	0.186	0.186	-0.002
17	REN105L03	892	4	2.334	0.585	0.572	-0.024
18	REN162C04	892	5	2.751	0.623	0.636	0.021
19	REN169D01	892	7	3.983	0.748	0.749	0.002
20	REN169O18	892	8	4.375	0.756	0.771	0.021
21	REN247M23	892	4	1.999	0.484	0.500	0.031
22	REN54P11	892	4	2.772	0.638	0.639	0.002
23	REN64E19	892	5	3.269	0.678	0.694	0.023
24	VGL0760	892	15	3.606	0.719	0.723	0.006
25	VGL0910	892	9	4.018	0.723	0.751	0.037
26	VGL1063	892	9	3.490	0.684	0.714	0.042
27	VGL1165	892	8	4.028	0.743	0.752	0.011
28	VGL1828	892	5	1.073	0.063	0.068	0.073
29	VGL2009	892	7	1.515	0.334	0.340	0.017
30	VGL2409	892	5	1.304	0.240	0.233	-0.030
31	VGL2918	892	9	2.956	0.663	0.662	-0.001
32	VGL3008	892	6	1.787	0.457	0.440	-0.039
33	VGL3235	892	7	3.154	0.654	0.683	0.043

Standard genetic assessment for 7 STRs in the DLA region

Flat Coated Retriever

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	892	4	3.072	0.667	0.674	0.011
2	DLA I-4ACA	892	4	1.612	0.379	0.379	0.001
3	DLA I-4BCT	892	4	2.841	0.632	0.648	0.024
4	DLA1131	892	4	3.110	0.667	0.678	0.017
5	5ACA	892	2	1.705	0.396	0.414	0.043
6	5ACT	892	5	2.469	0.577	0.595	0.029
7	5BCA	892	3	2.379	0.563	0.580	0.029

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Flat Coated Retriever

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Flat Coated Retriever

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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