Updated Apr 17, 2024
DLA Class I Haplotype Frequencies
DLA1 # | STR types | Black Russian Terrier (n=151) |
---|---|---|
1006 | 387 375 293 180 | 0.046 |
1014 | 375 373 287 178 | 0.036 |
1016 | 382 371 277 178 | 0.010 |
1091 | 381 371 277 181 | 0.503 |
1092 | 376 379 277 181 | 0.255 |
1093 | 386 379 277 180 | 0.079 |
1094 | 395 375 277 176 | 0.013 |
1095 | 382 371 277 184 | 0.023 |
1096 | 395 375 277 182 | 0.003 |
1160 | 386 369 289 176 | 0.030 |
DLA Class II Haplotype Frequencies
DLA2 # | STR types | Black Russian Terrier (n=151) |
---|---|---|
2005 | 339 322 280 | 0.013 |
2007 | 351 327 280 | 0.046 |
2023 | 341 323 282 | 0.003 |
2031 | 339 322 282 | 0.033 |
2032 | 339 323 280 | 0.079 |
2033 | 339 323 282 | 0.507 |
2037 | 341 327 280 | 0.288 |
2060 | 343 323 284 | 0.030 |
Allele Frequencies
# | Locus Name | Allele | Black Russian Terrier (n=151) |
---|---|---|---|
1 | AHT121 | 92 | 0.095 |
98 | 0.275 | ||
102 | 0.176 | ||
108 | 0.049 | ||
110 | 0.046 | ||
112 | 0.307 | ||
114 | 0.026 | ||
116 | 0.003 | ||
120 | 0.023 | ||
2 | AHT137 | 131 | 0.023 |
133 | 0.219 | ||
135 | 0.137 | ||
137 | 0.098 | ||
141 | 0.294 | ||
147 | 0.206 | ||
151 | 0.023 | ||
3 | AHTH130 | 119 | 0.441 |
121 | 0.039 | ||
125 | 0.036 | ||
127 | 0.007 | ||
129 | 0.046 | ||
131 | 0.431 | ||
4 | AHTh171-A | 217 | 0.007 |
219 | 0.147 | ||
221 | 0.167 | ||
223 | 0.003 | ||
225 | 0.078 | ||
227 | 0.088 | ||
229 | 0.183 | ||
233 | 0.324 | ||
235 | 0.003 | ||
5 | AHTh260 | 238 | 0.026 |
242 | 0.203 | ||
244 | 0.301 | ||
246 | 0.203 | ||
248 | 0.042 | ||
250 | 0.003 | ||
252 | 0.196 | ||
254 | 0.026 | ||
6 | AHTk211 | 87 | 0.719 |
89 | 0.137 | ||
91 | 0.042 | ||
93 | 0.098 | ||
95 | 0.003 | ||
7 | AHTk253 | 286 | 0.239 |
290 | 0.686 | ||
294 | 0.075 | ||
8 | C22.279 | 118 | 0.343 |
120 | 0.141 | ||
122 | 0.026 | ||
124 | 0.154 | ||
126 | 0.111 | ||
130 | 0.222 | ||
134 | 0.003 | ||
9 | FH2001 | 132 | 0.088 |
136 | 0.020 | ||
144 | 0.307 | ||
148 | 0.480 | ||
152 | 0.033 | ||
158 | 0.072 | ||
10 | FH2054 | 152 | 0.118 |
156 | 0.729 | ||
160 | 0.046 | ||
164 | 0.020 | ||
168 | 0.085 | ||
176 | 0.003 | ||
11 | FH2848 | 230 | 0.003 |
232 | 0.141 | ||
234 | 0.329 | ||
236 | 0.003 | ||
238 | 0.276 | ||
240 | 0.230 | ||
242 | 0.016 | ||
12 | INRA21 | 95 | 0.729 |
97 | 0.235 | ||
99 | 0.013 | ||
101 | 0.016 | ||
105 | 0.007 | ||
13 | INU005 | 110 | 0.010 |
122 | 0.320 | ||
124 | 0.569 | ||
126 | 0.098 | ||
128 | 0.003 | ||
14 | INU030 | 144 | 0.327 |
146 | 0.026 | ||
148 | 0.052 | ||
150 | 0.448 | ||
152 | 0.147 | ||
15 | INU055 | 208 | 0.265 |
210 | 0.078 | ||
214 | 0.320 | ||
216 | 0.219 | ||
218 | 0.118 | ||
16 | LEI004 | 85 | 0.497 |
95 | 0.350 | ||
97 | 0.154 | ||
17 | REN105L03 | 231 | 0.408 |
233 | 0.382 | ||
239 | 0.003 | ||
241 | 0.082 | ||
245 | 0.124 | ||
18 | REN162C04 | 200 | 0.229 |
202 | 0.291 | ||
204 | 0.392 | ||
206 | 0.016 | ||
208 | 0.065 | ||
210 | 0.007 | ||
19 | REN169D01 | 210 | 0.301 |
212 | 0.389 | ||
214 | 0.062 | ||
216 | 0.193 | ||
220 | 0.056 | ||
20 | REN169O18 | 162 | 0.248 |
164 | 0.212 | ||
166 | 0.167 | ||
168 | 0.160 | ||
170 | 0.212 | ||
21 | REN247M23 | 268 | 0.036 |
270 | 0.257 | ||
272 | 0.572 | ||
276 | 0.135 | ||
22 | REN54P11 | 222 | 0.379 |
226 | 0.209 | ||
228 | 0.003 | ||
232 | 0.007 | ||
236 | 0.075 | ||
238 | 0.327 | ||
23 | REN64E19 | 139 | 0.082 |
145 | 0.330 | ||
147 | 0.199 | ||
149 | 0.389 | ||
24 | VGL0760 | 12 | 0.017 |
13 | 0.010 | ||
18.2 | 0.003 | ||
19.2 | 0.305 | ||
20.2 | 0.089 | ||
21.2 | 0.189 | ||
22.2 | 0.381 | ||
23.2 | 0.007 | ||
25 | VGL0910 | 12 | 0.227 |
15 | 0.013 | ||
16 | 0.158 | ||
16.1 | 0.030 | ||
17 | 0.003 | ||
17.1 | 0.303 | ||
18.1 | 0.016 | ||
19.1 | 0.250 | ||
26 | VGL1063 | 8 | 0.144 |
10 | 0.252 | ||
13 | 0.033 | ||
14 | 0.010 | ||
15 | 0.118 | ||
16 | 0.042 | ||
17 | 0.245 | ||
18 | 0.026 | ||
20 | 0.127 | ||
21 | 0.003 | ||
27 | VGL1165 | 14 | 0.003 |
15 | 0.003 | ||
16 | 0.500 | ||
17 | 0.026 | ||
18 | 0.085 | ||
19 | 0.003 | ||
23 | 0.003 | ||
27 | 0.046 | ||
28 | 0.114 | ||
29 | 0.167 | ||
30 | 0.042 | ||
31 | 0.007 | ||
28 | VGL1828 | 14 | 0.016 |
15 | 0.217 | ||
16 | 0.016 | ||
17 | 0.276 | ||
18 | 0.043 | ||
19 | 0.138 | ||
20 | 0.289 | ||
21 | 0.003 | ||
29 | VGL2009 | 9 | 0.029 |
11 | 0.075 | ||
13 | 0.288 | ||
14 | 0.487 | ||
15 | 0.121 | ||
30 | VGL2409 | 13 | 0.003 |
15 | 0.497 | ||
16 | 0.199 | ||
17 | 0.173 | ||
18 | 0.029 | ||
19 | 0.098 | ||
31 | VGL2918 | 12 | 0.003 |
13 | 0.109 | ||
14 | 0.355 | ||
15 | 0.013 | ||
17.3 | 0.408 | ||
18.3 | 0.046 | ||
19.3 | 0.033 | ||
20.3 | 0.016 | ||
21.3 | 0.003 | ||
22.3 | 0.013 | ||
32 | VGL3008 | 14 | 0.121 |
15 | 0.082 | ||
17 | 0.010 | ||
18 | 0.137 | ||
19 | 0.464 | ||
20 | 0.013 | ||
21 | 0.010 | ||
22 | 0.154 | ||
23 | 0.010 | ||
33 | VGL3235 | 13 | 0.266 |
14 | 0.125 | ||
15 | 0.151 | ||
16 | 0.184 | ||
17 | 0.086 | ||
18 | 0.184 | ||
19 | 0.003 |
Standard genetic assessment based on 33 autosomal STR loci
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 151 | 6.485 | 3.496 | 0.687 | 0.683 | -0.009 | |
SE | 0.361 | 0.184 | 0.019 | 0.019 | 0.009 |
Standard genetic assessment based on 7 STRs in the DLA region
N | Na | Ne | Ho | He | F | ||
---|---|---|---|---|---|---|---|
Mean | 151 | 4.571 | 2.076 | 0.507 | 0.486 | -0.038 | |
SE | 0.529 | 0.192 | 0.056 | 0.052 | 0.015 |
Standard genetic assessment for individual STR loci
Black Russian Terrier
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | AHT121 | 151 | 9 | 4.639 | 0.797 | 0.784 | -0.017 |
2 | AHT137 | 151 | 7 | 4.847 | 0.791 | 0.794 | 0.004 |
3 | AHTH130 | 151 | 6 | 2.593 | 0.654 | 0.614 | -0.064 |
4 | AHTh171-A | 151 | 9 | 4.961 | 0.739 | 0.798 | 0.075 |
5 | AHTh260 | 151 | 8 | 4.670 | 0.843 | 0.786 | -0.073 |
6 | AHTk211 | 151 | 5 | 1.828 | 0.451 | 0.453 | 0.004 |
7 | AHTk253 | 151 | 3 | 1.874 | 0.510 | 0.466 | -0.093 |
8 | C22.279 | 151 | 7 | 4.474 | 0.752 | 0.776 | 0.032 |
9 | FH2001 | 151 | 6 | 2.945 | 0.699 | 0.660 | -0.059 |
10 | FH2054 | 151 | 6 | 1.803 | 0.477 | 0.445 | -0.071 |
11 | FH2848 | 151 | 7 | 3.878 | 0.717 | 0.742 | 0.034 |
12 | INRA21 | 151 | 5 | 1.704 | 0.431 | 0.413 | -0.044 |
13 | INU005 | 151 | 5 | 2.296 | 0.608 | 0.564 | -0.077 |
14 | INU030 | 151 | 5 | 3.009 | 0.582 | 0.668 | 0.129 |
15 | INU055 | 151 | 5 | 4.157 | 0.797 | 0.759 | -0.050 |
16 | LEI004 | 151 | 3 | 2.547 | 0.595 | 0.607 | 0.021 |
17 | REN105L03 | 151 | 5 | 2.984 | 0.634 | 0.665 | 0.046 |
18 | REN162C04 | 151 | 6 | 3.386 | 0.725 | 0.705 | -0.029 |
19 | REN169D01 | 151 | 5 | 3.500 | 0.686 | 0.714 | 0.039 |
20 | REN169O18 | 151 | 5 | 4.870 | 0.784 | 0.795 | 0.013 |
21 | REN247M23 | 151 | 4 | 2.422 | 0.605 | 0.587 | -0.031 |
22 | REN54P11 | 151 | 6 | 3.334 | 0.732 | 0.700 | -0.046 |
23 | REN64E19 | 151 | 4 | 3.262 | 0.693 | 0.693 | 0.001 |
24 | VGL0760 | 151 | 8 | 3.548 | 0.689 | 0.718 | 0.041 |
25 | VGL0910 | 151 | 8 | 4.313 | 0.770 | 0.768 | -0.002 |
26 | VGL1063 | 151 | 10 | 5.624 | 0.830 | 0.822 | -0.010 |
27 | VGL1165 | 151 | 12 | 3.303 | 0.758 | 0.697 | -0.087 |
28 | VGL1828 | 151 | 8 | 4.372 | 0.783 | 0.771 | -0.015 |
29 | VGL2009 | 151 | 5 | 2.933 | 0.680 | 0.659 | -0.031 |
30 | VGL2409 | 151 | 6 | 3.058 | 0.667 | 0.673 | 0.009 |
31 | VGL2918 | 151 | 10 | 3.244 | 0.691 | 0.692 | 0.001 |
32 | VGL3008 | 151 | 9 | 3.577 | 0.647 | 0.720 | 0.102 |
33 | VGL3235 | 151 | 7 | 5.414 | 0.862 | 0.815 | -0.057 |
Standard genetic assessment for 7 STRs in the DLA region
Black Russian Terrier
# | Locus | N | Na | Ne | Ho | He | F |
---|---|---|---|---|---|---|---|
1 | DLA I-3CCA | 151 | 7 | 2.979 | 0.717 | 0.664 | -0.079 |
2 | DLA I-4ACA | 151 | 5 | 2.464 | 0.609 | 0.594 | -0.025 |
3 | DLA I-4BCT | 151 | 4 | 1.261 | 0.204 | 0.207 | 0.014 |
4 | DLA1131 | 151 | 6 | 1.674 | 0.441 | 0.402 | -0.095 |
5 | 5ACA | 151 | 4 | 2.049 | 0.510 | 0.512 | 0.004 |
6 | 5ACT | 151 | 3 | 2.010 | 0.536 | 0.503 | -0.067 |
7 | 5BCA | 151 | 3 | 2.091 | 0.530 | 0.522 | -0.015 |