Statistics and Breed-wide Allele Frequency - Giant Schnauzer

Updated Jun 13, 2021

DLA Class I Haplotype Frequencies

DLA1 #STR typesGiant Schnauzer (n=287)
1006387 375 293 1800.044
1008386 373 289 1820.038
1011376 365 281 1800.010
1014375 373 287 1780.240
1016382 371 277 1780.045
1017386 373 289 1780.089
1054382 379 277 1840.003
1065380 371 277 1810.002
1068380 373 287 1810.051
1091381 371 277 1810.037
1092376 379 277 1810.270
1129382 371 277 1810.002
1159395 379 277 1810.166
1181381 371 277 1820.002
1263394 369 277 1800.002

DLA Class II Haplotype Frequencies

DLA2 #STR typesGiant Schnauzer (n=287)
2001343 324 2840.007
2003343 324 2820.031
2005339 322 2800.009
2006339 325 2800.150
2007351 327 2800.044
2012345 322 2800.010
2014339 322 2840.005
2022339 327 2820.003
2031339 322 2820.040
2033339 323 2820.038
2037341 327 2800.369
2050341 327 2840.139
2053343 324 2800.059
2060343 323 2840.002
2076345 322 2820.002
2083339 324 2820.002
2090339 322 2780.089

Allele Frequencies

#Locus NameAlleleGiant Schnauzer (n=287)
1AHT121 800.117
920.145
940.143
960.002
980.003
1000.002
1020.312
1040.098
1060.021
1080.089
1100.007
1120.054
1140.009
2AHT137 1310.063
1330.010
1370.003
1410.256
1430.002
1470.657
1490.005
1510.003
3AHTH130 1170.317
1190.068
1210.157
1250.024
1270.012
1290.141
1310.272
1330.007
1350.002
4AHTh171-A 2190.394
2210.040
2250.253
2270.002
2290.002
2330.270
2350.040
5AHTh260 2380.195
2400.242
2420.012
2460.460
2480.073
2500.010
2520.007
6AHTk211 870.561
910.263
930.064
950.111
7AHTk253 2840.012
2860.406
2880.167
2900.115
2920.202
2940.098
8C22.279 1160.105
1180.547
1220.023
1240.270
1260.056
9FH2001 1280.186
1320.056
1360.005
1440.385
1480.355
1520.010
1580.002
10FH2054 1440.017
1520.200
1560.284
1600.319
1640.002
1680.125
1720.052
11FH2848 2300.003
2320.030
2340.218
2360.019
2380.110
2400.542
2420.012
2440.066
12INRA21 950.465
970.016
990.016
1010.167
1030.155
1050.181
13INU005 1100.005
1220.003
1240.793
1260.111
1280.012
1300.005
1320.070
14INU030 1440.239
1460.280
1480.003
1500.202
1520.247
1540.028
15INU055 2080.003
2100.458
2140.073
2160.263
2180.179
2200.023
16LEI004 830.002
850.098
950.826
1030.002
1070.073
17REN105L03 2310.024
2330.916
2350.035
2390.002
2410.023
18REN162C04 2000.030
2020.267
2040.200
2060.303
2080.200
19REN169D01 2020.009
2100.005
2120.003
2160.880
2200.052
2220.051
20REN169O18 1600.141
1620.274
1640.007
1660.145
1680.268
1700.162
1720.003
21REN247M23 2680.568
2700.197
2720.204
2760.031
22REN54P11 2220.010
2260.216
2280.042
2320.021
2340.010
2360.455
2380.246
23REN64E19 1450.389
1470.247
1530.362
1550.002
24VGL0760 120.723
130.016
140.003
18.20.061
19.20.038
20.20.028
21.20.054
22.20.051
23.20.026
25VGL0910 160.059
16.10.012
170.003
17.10.237
18.10.108
19.10.282
20.10.171
21.10.031
22.10.085
23.10.009
24.10.002
26VGL1063 80.002
90.003
110.010
130.228
140.314
150.047
160.028
170.003
180.129
190.037
200.192
210.002
220.005
27VGL1165 150.106
160.145
170.251
180.003
190.127
210.003
220.073
260.059
270.002
280.005
290.176
300.047
330.002
28VGL1828 140.101
150.002
160.131
170.317
180.016
190.091
200.122
210.199
220.003
230.019
29VGL2009 90.007
110.042
120.031
130.598
140.089
150.232
160.002
30VGL2409 130.021
140.019
150.166
160.040
170.113
180.402
190.073
200.159
210.007
31VGL2918 110.003
120.251
130.181
140.073
150.012
160.005
17.30.153
18.30.172
19.30.108
20.30.026
21.30.010
22.30.003
32VGL3008 100.188
130.005
150.120
160.073
170.009
180.183
190.256
200.153
210.012
33VGL3235 130.279
140.456
150.139
160.087
180.038

Standard genetic assessment based on 33 autosomal STR loci

Giant Schnauzer

  NNaNeHoHeF
Mean2877.4853.5300.6240.6550.054
 SE 0.4500.2460.0310.0300.010

Standard genetic assessment based on 7 STRs in the DLA region

Giant Schnauzer

  NNaNeHoHeF
Mean2875.5712.9240.6200.6320.018
 SE 0.5660.3720.0270.0300.012

Standard genetic assessment for individual STR loci

Giant Schnauzer

#LocusNNaNeHoHeF
1AHT121287135.7770.7770.8270.060
2AHT13728781.9960.4950.4990.008
3AHTH13028794.4580.7670.7760.012
4AHTh171-A28773.3900.7140.705-0.013
5AHTh26028773.1860.7390.686-0.077
6AHTk21128742.4970.5090.6000.151
7AHTk25328763.8990.6900.7440.072
8C22.27928752.5860.5610.6130.085
9FH200128773.2000.6060.6870.118
10FH205428774.1460.7630.759-0.006
11FH284828782.7870.6270.6410.022
12INRA2128763.3150.6380.6980.087
13INU00528771.5480.3240.3540.085
14INU03028764.1930.7280.7620.044
15INU05528763.1520.6170.6830.097
16LEI00428751.4350.3000.3030.012
17REN105L0328751.1880.1390.1580.118
18REN162C0428754.0970.7040.7560.069
19REN169D0128761.2830.1640.2210.258
20REN169O1828774.6740.7530.7860.043
21REN247M2328742.4760.5820.5960.024
22REN54P1128773.1630.6130.6840.103
23REN64E1928742.9120.6520.6570.008
24VGL076028791.8690.4010.4650.138
25VGL0910287115.3010.8050.8110.008
26VGL1063287134.8020.7460.7920.058
27VGL1165287136.5190.8150.8470.037
28VGL1828287105.2360.7910.8090.022
29VGL200928772.3730.5400.5790.067
30VGL240928794.2530.7560.7650.011
31VGL2918287125.9870.8470.833-0.016
32VGL300828795.6180.7840.8220.046
33VGL323528753.1790.6550.6850.044

Standard genetic assessment for 7 STRs in the DLA region

Giant Schnauzer

#LocusNNaNeHoHeF
1DLA I-3CCA28795.3000.7840.8110.034
2DLA I-4ACA28762.6510.5960.6230.043
3DLA I-4BCT28752.6210.5820.6190.059
4DLA113128752.3710.5990.578-0.037
55ACA28752.6060.6270.616-0.018
65ACT28752.7260.6100.6330.037
75BCA28742.1930.5400.5440.007