Statistics and Breed-wide Allele Frequency - Giant Schnauzer

Updated Jun 13, 2021

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Giant Schnauzer (n=287)
1006	387 375 293 180	0.044
1008	386 373 289 182	0.038
1011	376 365 281 180	0.010
1014	375 373 287 178	0.240
1016	382 371 277 178	0.045
1017	386 373 289 178	0.089
1054	382 379 277 184	0.003
1065	380 371 277 181	0.002
1068	380 373 287 181	0.051
1091	381 371 277 181	0.037
1092	376 379 277 181	0.270
1129	382 371 277 181	0.002
1159	395 379 277 181	0.166
1181	381 371 277 182	0.002
1263	394 369 277 180	0.002

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Giant Schnauzer (n=287)
2001	343 324 284	0.007
2003	343 324 282	0.031
2005	339 322 280	0.009
2006	339 325 280	0.150
2007	351 327 280	0.044
2012	345 322 280	0.010
2014	339 322 284	0.005
2022	339 327 282	0.003
2031	339 322 282	0.040
2033	339 323 282	0.038
2037	341 327 280	0.369
2050	341 327 284	0.139
2053	343 324 280	0.059
2060	343 323 284	0.002
2076	345 322 282	0.002
2083	339 324 282	0.002
2090	339 322 278	0.089

Allele Frequencies

#	Locus Name	Allele	Giant Schnauzer (n=287)
1	AHT121	80	0.117
		92	0.145
		94	0.143
		96	0.002
		98	0.003
		100	0.002
		102	0.312
		104	0.098
		106	0.021
		108	0.089
		110	0.007
		112	0.054
		114	0.009
2	AHT137	131	0.063
		133	0.010
		137	0.003
		141	0.256
		143	0.002
		147	0.657
		149	0.005
		151	0.003
3	AHTH130	117	0.317
		119	0.068
		121	0.157
		125	0.024
		127	0.012
		129	0.141
		131	0.272
		133	0.007
		135	0.002
4	AHTh171-A	219	0.394
		221	0.040
		225	0.253
		227	0.002
		229	0.002
		233	0.270
		235	0.040
5	AHTh260	238	0.195
		240	0.242
		242	0.012
		246	0.460
		248	0.073
		250	0.010
		252	0.007
6	AHTk211	87	0.561
		91	0.263
		93	0.064
		95	0.111
7	AHTk253	284	0.012
		286	0.406
		288	0.167
		290	0.115
		292	0.202
		294	0.098
8	C22.279	116	0.105
		118	0.547
		122	0.023
		124	0.270
		126	0.056
9	FH2001	128	0.186
		132	0.056
		136	0.005
		144	0.385
		148	0.355
		152	0.010
		158	0.002
10	FH2054	144	0.017
		152	0.200
		156	0.284
		160	0.319
		164	0.002
		168	0.125
		172	0.052
11	FH2848	230	0.003
		232	0.030
		234	0.218
		236	0.019
		238	0.110
		240	0.542
		242	0.012
		244	0.066
12	INRA21	95	0.465
		97	0.016
		99	0.016
		101	0.167
		103	0.155
		105	0.181
13	INU005	110	0.005
		122	0.003
		124	0.793
		126	0.111
		128	0.012
		130	0.005
		132	0.070
14	INU030	144	0.239
		146	0.280
		148	0.003
		150	0.202
		152	0.247
		154	0.028
15	INU055	208	0.003
		210	0.458
		214	0.073
		216	0.263
		218	0.179
		220	0.023
16	LEI004	83	0.002
		85	0.098
		95	0.826
		103	0.002
		107	0.073
17	REN105L03	231	0.024
		233	0.916
		235	0.035
		239	0.002
		241	0.023
18	REN162C04	200	0.030
		202	0.267
		204	0.200
		206	0.303
		208	0.200
19	REN169D01	202	0.009
		210	0.005
		212	0.003
		216	0.880
		220	0.052
		222	0.051
20	REN169O18	160	0.141
		162	0.274
		164	0.007
		166	0.145
		168	0.268
		170	0.162
		172	0.003
21	REN247M23	268	0.568
		270	0.197
		272	0.204
		276	0.031
22	REN54P11	222	0.010
		226	0.216
		228	0.042
		232	0.021
		234	0.010
		236	0.455
		238	0.246
23	REN64E19	145	0.389
		147	0.247
		153	0.362
		155	0.002
24	VGL0760	12	0.723
		13	0.016
		14	0.003
		18.2	0.061
		19.2	0.038
		20.2	0.028
		21.2	0.054
		22.2	0.051
		23.2	0.026
25	VGL0910	16	0.059
		16.1	0.012
		17	0.003
		17.1	0.237
		18.1	0.108
		19.1	0.282
		20.1	0.171
		21.1	0.031
		22.1	0.085
		23.1	0.009
		24.1	0.002
26	VGL1063	8	0.002
		9	0.003
		11	0.010
		13	0.228
		14	0.314
		15	0.047
		16	0.028
		17	0.003
		18	0.129
		19	0.037
		20	0.192
		21	0.002
		22	0.005
27	VGL1165	15	0.106
		16	0.145
		17	0.251
		18	0.003
		19	0.127
		21	0.003
		22	0.073
		26	0.059
		27	0.002
		28	0.005
		29	0.176
		30	0.047
		33	0.002
28	VGL1828	14	0.101
		15	0.002
		16	0.131
		17	0.317
		18	0.016
		19	0.091
		20	0.122
		21	0.199
		22	0.003
		23	0.019
29	VGL2009	9	0.007
		11	0.042
		12	0.031
		13	0.598
		14	0.089
		15	0.232
		16	0.002
30	VGL2409	13	0.021
		14	0.019
		15	0.166
		16	0.040
		17	0.113
		18	0.402
		19	0.073
		20	0.159
		21	0.007
31	VGL2918	11	0.003
		12	0.251
		13	0.181
		14	0.073
		15	0.012
		16	0.005
		17.3	0.153
		18.3	0.172
		19.3	0.108
		20.3	0.026
		21.3	0.010
		22.3	0.003
32	VGL3008	10	0.188
		13	0.005
		15	0.120
		16	0.073
		17	0.009
		18	0.183
		19	0.256
		20	0.153
		21	0.012
33	VGL3235	13	0.279
		14	0.456
		15	0.139
		16	0.087
		18	0.038

Standard genetic assessment based on 33 autosomal STR loci

Giant Schnauzer

		N	Na	Ne	Ho	He	F
	Mean	287	7.485	3.530	0.624	0.655	0.054
	SE		0.450	0.246	0.031	0.030	0.010

Standard genetic assessment based on 7 STRs in the DLA region

Giant Schnauzer

		N	Na	Ne	Ho	He	F
	Mean	287	5.571	2.924	0.620	0.632	0.018
	SE		0.566	0.372	0.027	0.030	0.012

Standard genetic assessment for individual STR loci

Giant Schnauzer

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	287	13	5.777	0.777	0.827	0.060
2	AHT137	287	8	1.996	0.495	0.499	0.008
3	AHTH130	287	9	4.458	0.767	0.776	0.012
4	AHTh171-A	287	7	3.390	0.714	0.705	-0.013
5	AHTh260	287	7	3.186	0.739	0.686	-0.077
6	AHTk211	287	4	2.497	0.509	0.600	0.151
7	AHTk253	287	6	3.899	0.690	0.744	0.072
8	C22.279	287	5	2.586	0.561	0.613	0.085
9	FH2001	287	7	3.200	0.606	0.687	0.118
10	FH2054	287	7	4.146	0.763	0.759	-0.006
11	FH2848	287	8	2.787	0.627	0.641	0.022
12	INRA21	287	6	3.315	0.638	0.698	0.087
13	INU005	287	7	1.548	0.324	0.354	0.085
14	INU030	287	6	4.193	0.728	0.762	0.044
15	INU055	287	6	3.152	0.617	0.683	0.097
16	LEI004	287	5	1.435	0.300	0.303	0.012
17	REN105L03	287	5	1.188	0.139	0.158	0.118
18	REN162C04	287	5	4.097	0.704	0.756	0.069
19	REN169D01	287	6	1.283	0.164	0.221	0.258
20	REN169O18	287	7	4.674	0.753	0.786	0.043
21	REN247M23	287	4	2.476	0.582	0.596	0.024
22	REN54P11	287	7	3.163	0.613	0.684	0.103
23	REN64E19	287	4	2.912	0.652	0.657	0.008
24	VGL0760	287	9	1.869	0.401	0.465	0.138
25	VGL0910	287	11	5.301	0.805	0.811	0.008
26	VGL1063	287	13	4.802	0.746	0.792	0.058
27	VGL1165	287	13	6.519	0.815	0.847	0.037
28	VGL1828	287	10	5.236	0.791	0.809	0.022
29	VGL2009	287	7	2.373	0.540	0.579	0.067
30	VGL2409	287	9	4.253	0.756	0.765	0.011
31	VGL2918	287	12	5.987	0.847	0.833	-0.016
32	VGL3008	287	9	5.618	0.784	0.822	0.046
33	VGL3235	287	5	3.179	0.655	0.685	0.044

Standard genetic assessment for 7 STRs in the DLA region

Giant Schnauzer

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	287	9	5.300	0.784	0.811	0.034
2	DLA I-4ACA	287	6	2.651	0.596	0.623	0.043
3	DLA I-4BCT	287	5	2.621	0.582	0.619	0.059
4	DLA1131	287	5	2.371	0.599	0.578	-0.037
5	5ACA	287	5	2.606	0.627	0.616	-0.018
6	5ACT	287	5	2.726	0.610	0.633	0.037
7	5BCA	287	4	2.193	0.540	0.544	0.007

Veterinary Genetics Laboratory

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Statistics and Breed-wide Allele Frequency - Giant Schnauzer

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Giant Schnauzer

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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