Statistics and Breed-wide Allele Frequency - Llewellin Setter

Updated Jun 13, 2021

DLA Class I Haplotype Frequencies

DLA1 #STR typesLlewellin Setter (n=99)
1008386 373 289 1820.066
1016382 371 277 1780.025
1026390 369 289 1860.030
1030380 373 293 1780.025
1045376 371 277 1860.005
1054382 379 277 1840.086
1077376 369 291 1780.561
1134384 365 291 1780.167
1142376 379 277 1800.025
1201382 381 277 1810.005
1212380 373 293 1800.005

DLA Class II Haplotype Frequencies

DLA2 #STR typesLlewellin Setter (n=99)
2002343 327 2800.025
2005339 322 2800.798
2012345 322 2800.035
2018339 324 2840.025
2022339 327 2820.086
2023341 323 2820.015
2035341 323 2800.005
2104341 323 2840.010

Allele Frequencies

#Locus NameAlleleLlewellin Setter (n=99)
1AHT121 800.096
960.359
980.040
1000.035
1020.232
1060.167
1080.005
1120.015
1140.051
2AHT137 1310.030
1370.030
1450.096
1470.515
1490.313
1510.015
3AHTH130 1190.202
1210.495
1230.005
1270.268
1290.015
1310.015
4AHTh171-A 2170.015
2190.545
2250.126
2330.136
2350.051
2410.126
5AHTh260 2400.126
2440.051
2460.278
2480.545
6AHTk211 870.152
890.232
910.121
930.035
950.460
7AHTk253 2840.389
2860.177
2880.111
2900.121
2920.202
8C22.279 1160.646
1180.010
1240.020
1260.253
1300.071
9FH2001 1240.177
1280.035
1320.273
1360.086
1400.101
1440.212
1480.116
10FH2054 1480.081
1520.167
1560.076
1600.187
1640.020
1680.061
1720.071
1760.242
1800.071
1880.025
11FH2848 2380.121
2400.444
2420.404
2440.025
2460.005
12INRA21 950.010
970.677
1010.096
1030.141
1050.076
13INU005 1100.035
1240.076
1260.202
1280.687
14INU030 1440.621
1460.096
1480.061
1500.177
1520.040
1560.005
15INU055 2100.384
2120.207
2140.409
16LEI004 850.727
950.253
970.005
1050.015
17REN105L03 2310.106
2330.071
2350.394
2410.429
18REN162C04 1980.005
2020.843
2040.015
2060.136
19REN169D01 2020.616
2060.045
2100.025
2120.111
2160.076
2180.091
2200.030
2240.005
20REN169O18 1600.005
1620.020
1640.247
1660.025
1680.672
1700.030
21REN247M23 2680.202
2700.343
2720.444
2740.010
22REN54P11 2220.348
2260.298
2320.242
2340.111
23REN64E19 1450.328
1470.167
1490.005
1530.500
24VGL0760 120.005
18.20.313
19.20.121
20.20.359
21.20.035
22.20.121
23.20.035
24.20.010
25VGL0910 130.025
140.222
150.076
160.010
17.10.020
18.10.015
19.10.141
20.10.035
21.10.318
22.10.111
23.10.005
24.10.020
26VGL1063 80.126
90.126
130.374
140.111
150.020
180.071
190.172
27VGL1165 140.121
160.010
180.020
190.061
200.010
210.111
220.131
230.298
240.010
270.005
300.202
310.020
28VGL1828 140.040
160.066
190.702
200.116
220.076
29VGL2009 90.005
110.131
130.116
140.747
30VGL2409 140.005
150.025
160.465
170.429
180.056
190.020
31VGL2918 120.005
130.621
140.227
150.030
160.020
17.30.010
18.30.025
19.30.061
32VGL3008 140.323
150.071
160.010
180.288
190.202
200.101
210.005
33VGL3235 120.323
130.328
140.182
150.131
160.005
170.015
180.010
190.005

Standard genetic assessment based on 33 autosomal STR loci

Llewellin Setter

  NNaNeHoHeF
Mean996.0913.1300.6070.6310.035
 SE 0.3910.2210.0230.0230.013

Standard genetic assessment based on 7 STRs in the DLA region

Llewellin Setter

  NNaNeHoHeF
Mean994.7141.7660.3460.3900.108
 SE 0.4390.1900.0520.0590.014

Standard genetic assessment for individual STR loci

Llewellin Setter

#LocusNNaNeHoHeF
1AHT1219994.4400.7070.7750.087
2AHT1379962.6690.5660.6250.095
3AHTH1309962.7940.6460.642-0.007
4AHTh171-A9962.8510.6670.649-0.027
5AHTh2609942.5430.6570.607-0.082
6AHTk2119953.2880.6360.6960.086
7AHTk2539953.9950.7470.7500.003
8C22.2799952.0530.5660.513-0.103
9FH20019975.4660.7470.8170.085
10FH205499106.7360.8480.8520.004
11FH28489952.6590.5350.6240.142
12INRA219952.0280.4650.5070.083
13INU0059941.9250.4650.4800.033
14INU0309962.3160.4950.5680.129
15INU0559932.7970.6570.642-0.022
16LEI0049941.6860.3940.4070.032
17REN105L039942.8110.5560.6440.138
18REN162C049941.3690.2730.270-0.011
19REN169D019982.4410.4950.5900.162
20REN169O189961.9440.5350.486-0.103
21REN247M239942.8060.6360.6440.011
22REN54P119943.5540.5960.7190.171
23REN64E199942.5940.6160.614-0.003
24VGL07609983.8660.7470.741-0.008
25VGL091099125.2150.7170.8080.113
26VGL10639974.5700.7680.7810.017
27VGL116599125.5960.8280.821-0.009
28VGL18289951.9300.4040.4820.162
29VGL20099941.6960.4340.411-0.058
30VGL24099962.4730.6160.596-0.034
31VGL29189982.2560.5150.5570.075
32VGL30089974.1070.7780.757-0.028
33VGL32359983.8030.7270.7370.013

Standard genetic assessment for 7 STRs in the DLA region

Llewellin Setter

#LocusNNaNeHoHeF
1DLA I-3CCA9962.5210.5350.6030.113
2DLA I-4ACA9962.5030.5450.6010.092
3DLA I-4BCT9941.7840.3640.4390.173
4DLA11319961.6160.3330.3810.126
55ACA9941.2060.1520.1710.113
65ACT9941.4120.2630.2920.100
75BCA9931.3200.2320.2430.043