Statistics and Breed-wide Allele Frequency - Llewellin Setter

Updated Aug 9, 2020

DLA Class I Haplotype Frequencies

DLA1 #STR typesLlewellin Setter (n=98)
1008386 373 289 1820.066
1016382 371 277 1780.020
1026390 369 289 1860.031
1030380 373 293 1780.026
1045376 371 277 1860.005
1054382 379 277 1840.087
1077376 369 291 1780.566
1134384 365 291 1780.163
1142376 379 277 1800.026
1201382 381 277 1810.005
1212380 373 293 1800.005

DLA Class II Haplotype Frequencies

DLA2 #STR typesLlewellin Setter (n=98)
2002343 327 2800.020
2005339 322 2800.801
2012345 322 2800.036
2018339 324 2840.026
2022339 327 2820.087
2023341 323 2820.015
2035341 323 2800.005
2104341 323 2840.010

Allele Frequencies

#Locus NameAlleleLlewellin Setter (n=98)
1AHT121 800.097
960.362
980.041
1000.031
1020.230
1060.168
1080.005
1120.015
1140.051
2AHT137 1310.031
1370.031
1450.097
1470.520
1490.306
1510.015
3AHTH130 1190.204
1210.490
1230.005
1270.270
1290.015
1310.015
4AHTh171-A 2170.015
2190.541
2250.128
2330.138
2350.051
2410.128
5AHTh260 2400.122
2440.051
2460.276
2480.551
6AHTk211 870.148
890.235
910.122
930.036
950.459
7AHTk253 2840.393
2860.179
2880.112
2900.122
2920.194
8C22.279 1160.643
1180.010
1240.020
1260.255
1300.071
9FH2001 1240.179
1280.036
1320.270
1360.087
1400.102
1440.209
1480.117
10FH2054 1480.082
1520.168
1560.077
1600.189
1640.020
1680.061
1720.071
1760.240
1800.066
1880.026
11FH2848 2380.112
2400.449
2420.408
2440.026
2460.005
12INRA21 950.010
970.679
1010.097
1030.143
1050.071
13INU005 1100.036
1240.077
1260.199
1280.689
14INU030 1440.622
1460.092
1480.061
1500.179
1520.041
1560.005
15INU055 2100.378
2120.209
2140.413
16LEI004 850.735
950.250
970.005
1050.010
17REN105L03 2310.107
2330.071
2350.398
2410.423
18REN162C04 1980.005
2020.842
2040.015
2060.138
19REN169D01 2020.622
2060.046
2100.026
2120.107
2160.077
2180.087
2200.031
2240.005
20REN169O18 1600.005
1620.020
1640.250
1660.026
1680.668
1700.031
21REN247M23 2680.199
2700.347
2720.444
2740.010
22REN54P11 2220.352
2260.291
2320.245
2340.112
23REN64E19 1450.332
1470.168
1490.005
1530.495
24VGL0760 120.005
18.20.311
19.20.117
20.20.362
21.20.036
22.20.122
23.20.036
24.20.010
25VGL0910 130.026
140.219
150.077
160.010
17.10.020
18.10.010
19.10.143
20.10.036
21.10.321
22.10.112
23.10.005
24.10.020
26VGL1063 80.128
90.128
130.372
140.107
150.020
180.071
190.173
27VGL1165 140.122
160.010
180.020
190.061
200.010
210.112
220.128
230.301
240.010
270.005
300.199
310.020
28VGL1828 140.041
160.066
190.704
200.112
220.077
29VGL2009 90.005
110.133
130.117
140.745
30VGL2409 140.005
150.026
160.459
170.434
180.056
190.020
31VGL2918 120.005
130.622
140.224
150.031
160.020
17.30.010
18.30.026
19.30.061
32VGL3008 140.321
150.071
160.005
180.291
190.204
200.102
210.005
33VGL3235 120.316
130.332
140.184
150.133
160.005
170.015
180.010
190.005

Standard genetic assessment based on 33 autosomal STR loci

  NNaNeHoHeF
Llewellin SetterMean986.0913.1260.6080.6300.033
 SE 0.3910.2210.0230.0230.013

Standard genetic assessment based on 7 STRs in the DLA region

  NNaNeHoHeF
Llewellin SetterMean984.7141.7540.3430.3870.112
 SE 0.4390.1850.0520.0590.015

Standard genetic assessment for individual STR loci

#LocusNNaNeHoHeF
1AHT1219894.4020.7040.7730.089
2AHT1379862.6590.5710.6240.084
3AHTH1309862.8160.6530.645-0.013
4AHTh171-A9862.8830.6730.653-0.031
5AHTh2609842.5180.6530.603-0.083
6AHTk2119853.2880.6330.6960.091
7AHTk2539853.9780.7550.749-0.009
8C22.2799852.0660.5710.516-0.107
9FH20019875.5020.7450.8180.090
10FH205498106.7420.8470.8520.006
11FH28489852.6220.5410.6190.126
12INRA219852.0180.4590.5050.090
13INU0059841.9190.4590.4790.041
14INU0309862.3080.4900.5670.136
15INU0559832.8000.6630.643-0.032
16LEI0049841.6600.3880.3980.025
17REN105L039842.8230.5610.6460.131
18REN162C049841.3740.2760.272-0.013
19REN169D019882.4040.4900.5840.161
20REN169O189861.9560.5410.489-0.107
21REN247M239842.8000.6330.6430.016
22REN54P119843.5580.6020.7190.163
23REN64E199842.6090.6220.617-0.009
24VGL07609883.8530.7450.740-0.006
25VGL091098125.1730.7140.8070.115
26VGL10639874.5800.7650.7820.021
27VGL116598125.5870.8270.821-0.007
28VGL18289851.9220.3980.4800.170
29VGL20099841.7060.4390.414-0.061
30VGL24099862.4800.6220.597-0.043
31VGL29189882.2540.5100.5560.083
32VGL30089874.0800.7760.755-0.027
33VGL32359883.8200.7350.7380.005

Standard genetic assessment for 7 STRs in the DLA region

#LocusNNaNeHoHeF
1DLA I-3CCA9862.4880.5310.5980.113
2DLA I-4ACA9862.4650.5410.5940.090
3DLA I-4BCT9841.7760.3570.4370.183
4DLA11319861.6240.3370.3840.124
55ACA9841.1950.1430.1630.125
65ACT9841.4020.2550.2870.111
75BCA9831.3240.2350.2450.041