Statistics and Breed-wide Allele Frequency - Polish Lowland Sheepdog

Updated Dec 2, 2024

DLA Class I Haplotype Frequencies

DLA1 #STR typesPolish Lowland Sheepdog (n=119)Polski Owczarek Nizinny (n=1)
1016382 371 277 1780.021--
1040380 371 277 1860.6640.5
1067376 373 277 1780.3070.5
1068380 373 287 1810.004--
1156380 373 291 1780.004--

DLA Class II Haplotype Frequencies

DLA2 #STR typesPolish Lowland Sheepdog (n=119)Polski Owczarek Nizinny (n=1)
2014339 322 2840.6850.5
2017343 322 2800.2900.5
2053343 324 2800.004--
2067343 322 2840.017--
2098343 323 2820.004--

Allele Frequencies

#Locus NameAllelePolish Lowland Sheepdog (n=119)Polski Owczarek Nizinny (n=1)
1AHT121 1000.4870.5
1020.429--
1040.017--
1060.0670.5
2AHT137 1310.2820.5
1350.004--
1450.7100.5
1490.004--
3AHTH130 1210.050--
1230.029--
1270.4450.5
1310.4620.5
1330.013--
4AHTh171-A 2190.101--
2250.008--
2330.059--
2370.8111.0
2390.008--
2430.013--
5AHTh260 2400.134--
2440.029--
2460.7021.0
2500.134--
6AHTk211 870.252--
910.6971.0
950.050--
7AHTk253 2840.097--
2880.004--
2900.5041.0
2920.395--
8C22.279 1160.218--
1180.256--
1240.5251.0
9FH2001 1320.9750.5
1440.0250.5
10FH2054 1520.0170.5
1560.193--
1600.055--
1640.017--
1680.6760.5
1720.034--
1760.008--
11FH2848 2320.3070.5
2340.004--
2360.479--
2400.034--
2420.1760.5
12INRA21 950.080--
1010.9201.0
13INU005 1240.6680.5
1260.008--
1280.3030.5
1320.021--
14INU030 1440.584--
1500.2561.0
1520.160--
15INU055 2040.277--
2100.4660.5
2180.2560.5
16LEI004 950.8741.0
970.126--
17REN105L03 2270.046--
2310.5080.5
2330.4410.5
2410.004--
18REN162C04 2040.181--
2060.7141.0
2100.105--
19REN169D01 2100.046--
2120.214--
2160.672--
2200.0671.0
20REN169O18 1640.4120.5
1660.008--
1680.004--
1700.5760.5
21REN247M23 2640.004--
2660.0461.0
2680.861--
2720.088--
22REN54P11 2280.3321.0
2320.256--
2360.189--
2380.214--
2400.008--
23REN64E19 1470.181--
1490.122--
1530.6971.0
24VGL0760 140.038--
150.622--
160.008--
20.20.206--
21.20.1261.0
25VGL0910 130.046--
140.3030.5
150.084--
160.1390.5
19.10.092--
20.10.168--
21.10.160--
22.10.008--
26VGL1063 140.0800.5
150.197--
160.374--
170.118--
180.210--
190.0210.5
27VGL1165 170.2820.5
180.004--
250.004--
260.420--
270.034--
280.046--
290.004--
300.1890.5
310.017--
28VGL1828 190.2390.5
200.303--
210.181--
220.055--
230.2140.5
240.008--
29VGL2009 100.181--
110.1680.5
130.008--
140.5250.5
150.092--
160.025--
30VGL2409 150.046--
160.008--
170.6261.0
180.143--
190.176--
31VGL2918 120.7351.0
130.008--
150.025--
17.30.231--
32VGL3008 150.3740.5
160.059--
170.244--
180.1470.5
190.176--
33VGL3235 130.088--
140.6431.0
160.269--

Standard genetic assessment based on 33 autosomal STR loci

Polish Lowland Sheepdog

  NNaNeHoHeF
Mean1204.3942.4040.5270.520-0.009
 SE 0.2810.1720.0320.0300.013

Polski Owczarek Nizinny

  NNaNeHoHeF
Mean11.4851.4850.4850.242-0.485
 SE 0.0870.0870.0870.0430.087

Standard genetic assessment based on 7 STRs in the DLA region

Polish Lowland Sheepdog

  NNaNeHoHeF
Mean1202.7141.5630.2960.3180.047
 SE 0.1710.1310.0670.0720.013

Polski Owczarek Nizinny

  NNaNeHoHeF
Mean11.7141.7140.7140.357-0.714
 SE 0.1710.1710.1710.0850.171

Standard genetic assessment for individual STR loci

Polish Lowland Sheepdog

#LocusNNaNeHoHeF
1AHT12112042.3610.5920.576-0.026
2AHT13712041.7180.3250.4180.222
3AHTH13012052.4030.6250.584-0.071
4AHTh171-A12061.4840.2670.3260.182
5AHTh26012041.8790.4500.4680.038
6AHTk21112031.8020.4830.445-0.086
7AHTk25312042.3750.5580.5790.036
8C22.27912032.5540.6250.608-0.027
9FH200112021.0600.0580.057-0.030
10FH205412072.0110.5080.503-0.011
11FH284812052.8250.6170.6460.046
12INRA2112021.1710.1580.146-0.086
13INU00512041.8610.4500.4630.027
14INU03012032.3290.5670.5710.007
15INU05512032.7770.7420.640-0.159
16LEI00412021.2800.2170.2190.010
17REN105L0312042.1950.5420.5440.005
18REN162C0412031.7970.4920.443-0.109
19REN169D0112042.0110.5080.503-0.011
20REN169O1812041.9970.4750.4990.048
21REN247M2312041.3510.2500.2600.038
22REN54P1112053.8630.7750.741-0.046
23REN64E1912031.8630.5000.463-0.079
24VGL076012052.2660.5830.559-0.044
25VGL091012085.4660.8420.817-0.030
26VGL106312064.1590.7500.7600.013
27VGL116512093.3990.7170.706-0.015
28VGL182812064.3390.7920.770-0.029
29VGL200912062.8900.6580.654-0.007
30VGL240912052.2290.6080.551-0.103
31VGL291812041.6750.3750.4030.069
32VGL300812053.9130.7330.7440.015
33VGL323512032.0170.5420.504-0.074

Polski Owczarek Nizinny

#LocusNNaNeHoHeF
1AHT121122.0001.0000.500-1.000
2AHT137122.0001.0000.500-1.000
3AHTH130122.0001.0000.500-1.000
4AHTh171-A111.0000.0000.0000.000
5AHTh260111.0000.0000.0000.000
6AHTk211111.0000.0000.0000.000
7AHTk253111.0000.0000.0000.000
8C22.279111.0000.0000.0000.000
9FH2001122.0001.0000.500-1.000
10FH2054122.0001.0000.500-1.000
11FH2848122.0001.0000.500-1.000
12INRA21111.0000.0000.0000.000
13INU005122.0001.0000.500-1.000
14INU030111.0000.0000.0000.000
15INU055122.0001.0000.500-1.000
16LEI004111.0000.0000.0000.000
17REN105L03122.0001.0000.500-1.000
18REN162C04111.0000.0000.0000.000
19REN169D01111.0000.0000.0000.000
20REN169O18122.0001.0000.500-1.000
21REN247M23111.0000.0000.0000.000
22REN54P11111.0000.0000.0000.000
23REN64E19111.0000.0000.0000.000
24VGL0760111.0000.0000.0000.000
25VGL0910122.0001.0000.500-1.000
26VGL1063122.0001.0000.500-1.000
27VGL1165122.0001.0000.500-1.000
28VGL1828122.0001.0000.500-1.000
29VGL2009122.0001.0000.500-1.000
30VGL2409111.0000.0000.0000.000
31VGL2918111.0000.0000.0000.000
32VGL3008122.0001.0000.500-1.000
33VGL3235111.0000.0000.0000.000

Standard genetic assessment for 7 STRs in the DLA region

Polish Lowland Sheepdog

#LocusNNaNeHoHeF
1DLA I-3CCA12031.8330.4170.4540.083
2DLA I-4ACA12021.7630.4000.4330.076
3DLA I-4BCT12031.0170.0170.017-0.006
4DLA113112031.8180.4250.4500.055
55ACA12021.7630.4000.4330.076
65ACT12031.0170.0170.017-0.006
75BCA12031.7310.4000.4220.053

Polski Owczarek Nizinny

#LocusNNaNeHoHeF
1DLA I-3CCA122.0001.0000.500-1.000
2DLA I-4ACA122.0001.0000.500-1.000
3DLA I-4BCT111.0000.0000.0000.000
4DLA1131122.0001.0000.500-1.000
55ACA122.0001.0000.500-1.000
65ACT111.0000.0000.0000.000
75BCA122.0001.0000.500-1.000