Statistics and Breed-wide Allele Frequency - Shiba Inu

Updated Jul 8, 2025

DLA Class I Haplotype Frequencies

DLA1 #STR typesShiba Inu (n=190)
1007380 372 281 1820.003
1019380 373 287 1850.003
1054382 379 277 1840.358
1081395 379 289 1780.005
1091381 371 277 1810.216
1109381 379 291 1860.026
1133378 365 287 1720.005
1160386 369 289 1760.011
1191388 373 260 1860.239
1192376 373 281 1820.018
1193382 383 277 1840.003
1194385 369 291 1780.008
1195388 373 289 1810.021
1196390 372 291 1800.016
1197390 373 289 1860.016
1198392 371 277 1840.050
1281382 365 277 1860.003

DLA Class II Haplotype Frequencies

DLA2 #STR typesShiba Inu (n=190)
2001343 324 2840.016
2006339 325 2800.003
2015339 327 2800.050
2016339 323 2840.003
2018339 324 2840.234
2032339 323 2800.005
2067343 322 2840.208
2071339 322 2860.003
2083339 324 2820.005
2097343 327 2760.008
2098343 323 2820.011
2105341 325 2760.016
2106341 325 2860.363
2107343 322 2860.003
2108343 324 2940.021
2109345 322 2760.026
2110347 325 2680.005
2111351 324 2760.018
2129343 322 2940.003

Allele Frequencies

#Locus NameAlleleShiba Inu (n=190)
1AHT121 900.003
920.068
960.003
1000.258
1020.234
1040.432
1060.003
2AHT137 1310.113
1330.208
1350.003
1370.024
1410.087
1450.095
1490.126
1510.116
1530.229
3AHTH130 1110.011
1150.003
1190.005
1210.837
1250.016
1290.003
1310.008
1330.034
1350.084
4AHTh171-A 2190.826
2210.003
2250.013
2270.137
2290.008
2330.013
5AHTh260 2360.095
2420.037
2440.563
2460.174
2480.061
2520.071
6AHTk211 870.253
890.182
910.368
930.021
950.176
7AHTk253 2820.139
2860.132
2880.282
2900.289
2920.111
2940.047
8C22.279 1160.047
1180.050
1200.224
1220.005
1240.329
1260.108
1300.113
1320.124
9FH2001 1240.037
1320.100
1400.071
1440.366
1480.008
1520.137
1540.279
1560.003
10FH2054 1520.013
1560.118
1600.458
1640.171
1680.124
1720.071
1760.045
11FH2848 2300.016
2320.034
2340.008
2380.337
2420.603
2460.003
12INRA21 950.134
970.789
990.018
1010.058
13INU005 1060.284
1240.450
1260.058
1300.121
1320.087
14INU030 1420.032
1440.445
1460.021
1480.045
1500.429
1520.029
15INU055 2100.408
2120.271
2140.134
2160.134
2200.045
2220.008
16LEI004 850.387
950.474
970.139
17REN105L03 2270.092
2290.132
2310.024
2330.016
2350.063
2370.600
2390.061
2410.013
18REN162C04 2020.079
2040.016
2060.461
2080.003
2100.358
2120.084
19REN169D01 2020.321
2100.074
2120.200
2160.287
2180.118
20REN169O18 1620.029
1640.482
1660.155
1680.213
1700.118
1720.003
21REN247M23 2680.239
2700.537
2720.124
2760.011
2780.089
22REN54P11 2260.011
2280.166
2300.079
2320.087
2360.016
2380.203
2400.242
2420.197
23REN64E19 1390.003
1410.008
1450.166
1470.058
1490.358
1510.147
1530.100
1550.132
1570.029
24VGL0760 130.574
140.182
150.021
160.029
170.111
190.008
21.20.050
22.20.011
23.20.013
24.20.003
25VGL0910 15.10.003
16.10.274
17.10.008
18.10.184
19.10.455
20.10.058
21.10.011
22.10.008
26VGL1063 100.008
120.013
130.039
140.724
150.089
160.026
170.008
180.084
190.005
200.003
27VGL1165 150.008
160.003
180.021
210.074
260.066
270.097
280.124
300.132
310.466
320.011
28VGL1828 140.029
150.295
160.050
180.026
190.147
200.029
20.30.026
210.297
220.097
230.003
29VGL2009 90.034
110.005
120.137
130.589
140.150
150.082
160.003
30VGL2409 130.008
13.30.032
140.005
14.30.013
150.195
160.366
170.092
180.232
190.058
31VGL2918 120.061
130.150
140.200
150.029
160.008
17.30.021
18.30.068
19.30.361
20.30.008
21.30.013
22.30.082
32VGL3008 120.197
140.213
150.084
160.016
170.055
180.376
190.024
200.034
33VGL3235 120.250
130.292
140.100
150.029
160.011
170.205
180.076
190.037

Standard genetic assessment based on 33 autosomal STR loci

Shiba Inu

  NNaNeHoHeF
Mean1907.2423.4580.6640.6660.006
 SE 0.3350.2100.0260.0250.006

Standard genetic assessment based on 7 STRs in the DLA region

Shiba Inu

  NNaNeHoHeF
Mean1907.2863.1230.6610.6710.013
 SE 0.7200.1780.0180.0220.015

Standard genetic assessment for individual STR loci

Shiba Inu

#LocusNNaNeHoHeF
1AHT12119073.2020.6790.6880.013
2AHT13719096.4560.8160.8450.035
3AHTH13019091.4100.2630.2910.096
4AHTh171-A19061.4250.3050.298-0.024
5AHTh26019062.7300.6320.6340.003
6AHTk21119053.7870.7470.736-0.016
7AHTk25319064.6660.7680.7860.022
8C22.27919084.9320.8000.797-0.003
9FH200119084.0520.7790.753-0.034
10FH205419073.6300.6840.7250.056
11FH284819062.0920.4950.5220.052
12INRA2119041.5500.3530.3550.007
13INU00519053.2380.7050.691-0.020
14INU03019062.5900.6370.614-0.037
15INU05519063.5980.7160.7220.009
16LEI00419032.5410.5950.6070.019
17REN105L0319082.5350.6050.6060.001
18REN162C0419062.8270.6680.646-0.034
19REN169D0119054.0850.7840.755-0.038
20REN169O1819063.1610.6580.6840.038
21REN247M2319052.7100.5740.6310.091
22REN54P1119085.5480.7950.8200.031
23REN64E1919094.7880.8420.791-0.064
24VGL0760190102.6420.6160.6220.009
25VGL091019083.1280.6740.6800.010
26VGL1063190101.8470.4470.4590.024
27VGL1165190103.7120.7580.731-0.037
28VGL1828190104.7160.7630.7880.031
29VGL200919072.5220.6000.6030.006
30VGL240919094.1940.7420.7620.026
31VGL2918190114.7830.8370.791-0.058
32VGL300819084.1990.7680.762-0.009
33VGL323519084.8060.7950.792-0.004

Standard genetic assessment for 7 STRs in the DLA region

Shiba Inu

#LocusNNaNeHoHeF
1DLA I-3CCA190113.8100.7000.7380.051
2DLA I-4ACA19073.2100.6740.6880.022
3DLA I-4BCT19062.1800.5740.541-0.060
4DLA113119093.2640.7050.694-0.017
55ACA19063.2440.6950.692-0.004
65ACT19053.3460.6790.7010.032
75BCA19072.8040.6000.6430.067