Statistics and Breed-wide Allele Frequency - Shiba Inu

Updated Jul 6, 2025

DLA Class I Haplotype Frequencies

DLA1 #STR typesShiba Inu (n=189)
1007380 372 281 1820.003
1019380 373 287 1850.003
1054382 379 277 1840.357
1081395 379 289 1780.005
1091381 371 277 1810.217
1109381 379 291 1860.026
1133378 365 287 1720.005
1160386 369 289 1760.011
1191388 373 260 1860.238
1192376 373 281 1820.019
1193382 383 277 1840.003
1194385 369 291 1780.008
1195388 373 289 1810.021
1196390 372 291 1800.016
1197390 373 289 1860.016
1198392 371 277 1840.050
1281382 365 277 1860.003

DLA Class II Haplotype Frequencies

DLA2 #STR typesShiba Inu (n=189)
2001343 324 2840.016
2006339 325 2800.003
2015339 327 2800.050
2016339 323 2840.003
2018339 324 2840.233
2032339 323 2800.005
2067343 322 2840.209
2071339 322 2860.003
2083339 324 2820.005
2097343 327 2760.008
2098343 323 2820.011
2105341 325 2760.016
2106341 325 2860.362
2107343 322 2860.003
2108343 324 2940.021
2109345 322 2760.026
2110347 325 2680.005
2111351 324 2760.019
2129343 322 2940.003

Allele Frequencies

#Locus NameAlleleShiba Inu (n=189)
1AHT121 900.003
920.069
960.003
1000.257
1020.235
1040.431
1060.003
2AHT137 1310.114
1330.206
1350.003
1370.024
1410.087
1450.093
1490.127
1510.116
1530.230
3AHTH130 1110.011
1150.003
1190.005
1210.836
1250.016
1290.003
1310.008
1330.034
1350.085
4AHTh171-A 2190.825
2210.003
2250.013
2270.138
2290.008
2330.013
5AHTh260 2360.095
2420.037
2440.561
2460.175
2480.061
2520.071
6AHTk211 870.251
890.180
910.370
930.021
950.177
7AHTk253 2820.140
2860.132
2880.278
2900.291
2920.111
2940.048
8C22.279 1160.048
1180.050
1200.222
1220.005
1240.331
1260.106
1300.114
1320.124
9FH2001 1240.037
1320.101
1400.071
1440.365
1480.005
1520.138
1540.280
1560.003
10FH2054 1520.013
1560.119
1600.458
1640.169
1680.124
1720.071
1760.045
11FH2848 2300.016
2320.034
2340.008
2380.333
2420.606
2460.003
12INRA21 950.135
970.788
990.019
1010.058
13INU005 1060.283
1240.450
1260.058
1300.122
1320.087
14INU030 1420.032
1440.444
1460.021
1480.045
1500.429
1520.029
15INU055 2100.407
2120.270
2140.135
2160.135
2200.045
2220.008
16LEI004 850.386
950.474
970.140
17REN105L03 2270.093
2290.130
2310.024
2330.016
2350.063
2370.601
2390.061
2410.013
18REN162C04 2020.079
2040.016
2060.460
2080.003
2100.357
2120.085
19REN169D01 2020.323
2100.074
2120.201
2160.283
2180.119
20REN169O18 1620.029
1640.481
1660.156
1680.212
1700.119
1720.003
21REN247M23 2680.241
2700.537
2720.124
2760.011
2780.087
22REN54P11 2260.011
2280.164
2300.079
2320.087
2360.016
2380.204
2400.241
2420.198
23REN64E19 1390.003
1410.008
1450.164
1470.058
1490.357
1510.148
1530.101
1550.132
1570.029
24VGL0760 130.574
140.183
150.021
160.026
170.111
190.008
21.20.050
22.20.011
23.20.013
24.20.003
25VGL0910 15.10.003
16.10.270
17.10.008
18.10.185
19.10.458
20.10.058
21.10.011
22.10.008
26VGL1063 100.008
120.013
130.040
140.722
150.090
160.026
170.008
180.085
190.005
200.003
27VGL1165 150.008
160.003
180.021
210.074
260.066
270.098
280.124
300.130
310.466
320.011
28VGL1828 140.029
150.294
160.050
180.026
190.146
200.029
20.30.026
210.299
220.098
230.003
29VGL2009 90.034
110.005
120.135
130.590
140.151
150.082
160.003
30VGL2409 130.008
13.30.032
140.005
14.30.013
150.193
160.368
170.090
180.233
190.058
31VGL2918 120.061
130.151
140.198
150.029
160.008
17.30.021
18.30.069
19.30.360
20.30.008
21.30.013
22.30.082
32VGL3008 120.198
140.212
150.085
160.013
170.056
180.378
190.024
200.034
33VGL3235 120.249
130.294
140.098
150.029
160.011
170.206
180.077
190.037

Standard genetic assessment based on 33 autosomal STR loci

Shiba Inu

  NNaNeHoHeF
Mean1897.2423.4590.6630.6660.007
 SE 0.3350.2100.0250.0240.006

Standard genetic assessment based on 7 STRs in the DLA region

Shiba Inu

  NNaNeHoHeF
Mean1897.2863.1260.6590.6710.016
 SE 0.7200.1790.0180.0220.015

Standard genetic assessment for individual STR loci

Shiba Inu

#LocusNNaNeHoHeF
1AHT12118973.2050.6770.6880.016
2AHT13718996.4540.8150.8450.036
3AHTH13018991.4130.2650.2920.095
4AHTh171-A18961.4270.3070.299-0.025
5AHTh26018962.7450.6350.6360.001
6AHTk21118953.7800.7460.735-0.014
7AHTk25318964.6810.7720.7860.018
8C22.27918984.9220.7990.797-0.003
9FH200118984.0410.7780.753-0.034
10FH205418973.6360.6830.7250.058
11FH284818962.0850.4970.5200.044
12INRA2118941.5540.3540.3570.006
13INU00518953.2450.7040.692-0.017
14INU03018962.5940.6350.614-0.033
15INU05518963.6060.7140.7230.012
16LEI00418932.5440.5930.6070.024
17REN105L0318982.5330.6030.6050.003
18REN162C0418962.8320.6670.647-0.031
19REN169D0118954.0920.7880.756-0.043
20REN169O1818963.1650.6560.6840.041
21REN247M2318952.7060.5710.6300.094
22REN54P1118985.5550.7940.8200.032
23REN64E1918994.8010.8410.792-0.063
24VGL0760189102.6370.6140.6210.011
25VGL091018983.1230.6770.6800.004
26VGL1063189101.8540.4500.4610.023
27VGL1165189103.7160.7570.731-0.035
28VGL1828189104.7180.7620.7880.033
29VGL200918972.5190.5980.6030.009
30VGL240918994.1760.7410.7610.026
31VGL2918189114.8010.8360.792-0.056
32VGL300818984.1760.7670.761-0.009
33VGL323518984.7970.7940.792-0.003

Standard genetic assessment for 7 STRs in the DLA region

Shiba Inu

#LocusNNaNeHoHeF
1DLA I-3CCA189113.8180.6980.7380.054
2DLA I-4ACA18973.2140.6720.6890.024
3DLA I-4BCT18962.1790.5710.541-0.056
4DLA113118993.2680.7040.694-0.014
55ACA18963.2470.6930.692-0.002
65ACT18953.3510.6770.7020.035
75BCA18972.8080.5980.6440.071