Statistics and Breed-wide Allele Frequency - Shiba Inu

Updated Sep 8, 2025

DLA Class I Haplotype Frequencies

DLA1 #STR typesShiba Inu (n=192)
1007380 372 281 1820.003
1019380 373 287 1850.003
1054382 379 277 1840.357
1081395 379 289 1780.005
1091381 371 277 1810.214
1109381 379 291 1860.026
1133378 365 287 1720.005
1160386 369 289 1760.010
1191388 373 260 1860.245
1192376 373 281 1820.018
1193382 383 277 1840.003
1194385 369 291 1780.008
1195388 373 289 1810.021
1196390 372 291 1800.016
1197390 373 289 1860.016
1198392 371 277 1840.049
1281382 365 277 1860.003

DLA Class II Haplotype Frequencies

DLA2 #STR typesShiba Inu (n=192)
2001343 324 2840.016
2006339 325 2800.003
2015339 327 2800.049
2016339 323 2840.003
2018339 324 2840.240
2032339 323 2800.005
2067343 322 2840.206
2071339 322 2860.003
2083339 324 2820.005
2097343 327 2760.008
2098343 323 2820.010
2105341 325 2760.016
2106341 325 2860.362
2107343 322 2860.003
2108343 324 2940.021
2109345 322 2760.026
2110347 325 2680.005
2111351 324 2760.018
2129343 322 2940.003

Allele Frequencies

#Locus NameAlleleShiba Inu (n=192)
1AHT121 900.003
920.068
960.003
1000.258
1020.234
1040.432
1060.003
2AHT137 1310.112
1330.206
1350.003
1370.023
1410.089
1450.094
1490.130
1510.117
1530.227
3AHTH130 1110.010
1150.003
1190.005
1210.836
1250.016
1290.005
1310.008
1330.034
1350.083
4AHTh171-A 2190.826
2210.003
2250.013
2270.138
2290.008
2330.013
5AHTh260 2360.094
2420.036
2440.568
2460.172
2480.060
2520.070
6AHTk211 870.258
890.180
910.367
930.021
950.174
7AHTk253 2820.138
2860.130
2880.281
2900.292
2920.109
2940.049
8C22.279 1160.047
1180.049
1200.221
1220.005
1240.328
1260.109
1300.115
1320.125
9FH2001 1240.036
1320.102
1400.070
1440.365
1480.008
1520.138
1540.279
1560.003
10FH2054 1520.013
1560.122
1600.458
1640.169
1680.122
1720.070
1760.044
11FH2848 2300.016
2320.034
2340.010
2380.336
2420.602
2460.003
12INRA21 950.135
970.789
990.018
1010.057
13INU005 1060.281
1240.456
1260.057
1300.120
1320.086
14INU030 1420.031
1440.445
1460.021
1480.044
1500.430
1520.029
15INU055 2100.411
2120.271
2140.133
2160.133
2200.044
2220.008
16LEI004 850.385
950.477
970.138
17REN105L03 2270.094
2290.130
2310.023
2330.016
2350.063
2370.602
2390.060
2410.013
18REN162C04 2020.078
2040.016
2060.456
2080.003
2100.359
2120.089
19REN169D01 2020.320
2100.078
2120.198
2160.286
2180.117
20REN169O18 1620.029
1640.482
1660.154
1680.216
1700.117
1720.003
21REN247M23 2680.240
2700.536
2720.125
2760.010
2780.089
22REN54P11 2260.010
2280.169
2300.078
2320.086
2360.016
2380.201
2400.242
2420.198
23REN64E19 1390.003
1410.008
1450.164
1470.057
1490.359
1510.146
1530.099
1550.135
1570.029
24VGL0760 130.573
140.182
150.021
160.029
170.112
190.008
21.20.049
22.20.010
23.20.013
24.20.003
25VGL0910 15.10.005
16.10.276
17.10.008
18.10.182
19.10.451
20.10.060
21.10.010
22.10.008
26VGL1063 100.008
120.013
130.039
140.727
150.089
160.026
170.008
180.083
190.005
200.003
27VGL1165 150.008
160.003
180.021
210.073
260.065
270.099
280.122
300.130
310.469
320.010
28VGL1828 140.029
150.292
160.049
180.026
190.151
200.029
20.30.026
210.297
220.099
230.003
29VGL2009 90.034
110.005
120.138
130.591
140.148
150.081
160.003
30VGL2409 130.008
13.30.031
140.005
14.30.016
150.195
160.362
170.094
180.232
190.057
31VGL2918 120.060
130.148
140.198
150.029
160.008
17.30.021
18.30.068
19.30.362
20.30.008
21.30.016
22.30.083
32VGL3008 120.195
140.211
150.086
160.018
170.055
180.378
190.023
200.034
33VGL3235 120.247
130.294
140.099
150.029
160.013
170.206
180.076
190.036

Standard genetic assessment based on 33 autosomal STR loci

Shiba Inu

  NNaNeHoHeF
Mean1927.2423.4580.6630.6660.006
 SE 0.3350.2110.0250.0250.006

Standard genetic assessment based on 7 STRs in the DLA region

Shiba Inu

  NNaNeHoHeF
Mean1927.2863.1190.6590.6710.015
 SE 0.7200.1770.0180.0220.015

Standard genetic assessment for individual STR loci

Shiba Inu

#LocusNNaNeHoHeF
1AHT12119273.1960.6770.6870.015
2AHT13719296.4910.8180.8460.033
3AHTH13019291.4140.2660.2930.092
4AHTh171-A19261.4270.3070.299-0.028
5AHTh26019262.6990.6250.6300.007
6AHTk21119253.7810.7450.736-0.013
7AHTk25319264.6600.7660.7850.025
8C22.27919284.9490.8020.798-0.005
9FH200119284.0610.7810.754-0.037
10FH205419273.6260.6770.7240.065
11FH284819262.1000.5000.5240.045
12INRA2119241.5510.3540.3550.004
13INU00519253.2070.6980.688-0.014
14INU03019262.5830.6410.613-0.045
15INU05519263.5720.7140.7200.009
16LEI00419232.5340.5940.6050.019
17REN105L0319282.5250.6040.604-0.000
18REN162C0419262.8490.6720.649-0.035
19REN169D0119254.1040.7860.756-0.040
20REN169O1819263.1550.6510.6830.047
21REN247M2319252.7120.5780.6310.084
22REN54P1119285.5390.7970.8190.028
23REN64E1919294.7700.8330.790-0.054
24VGL0760192102.6450.6150.6220.012
25VGL091019283.1620.6770.6840.010
26VGL1063192101.8340.4430.4550.027
27VGL1165192103.6820.7550.728-0.037
28VGL1828192104.7330.7660.7890.029
29VGL200919272.5110.5990.6020.005
30VGL240919294.2320.7450.7640.025
31VGL2918192114.7850.8390.791-0.060
32VGL300819284.2080.7710.762-0.011
33VGL323519284.8090.7970.792-0.006

Standard genetic assessment for 7 STRs in the DLA region

Shiba Inu

#LocusNNaNeHoHeF
1DLA I-3CCA192113.8020.6980.7370.053
2DLA I-4ACA19273.2080.6720.6880.024
3DLA I-4BCT19262.1920.5730.544-0.054
4DLA113119293.2610.7030.693-0.014
55ACA19263.2400.6930.691-0.002
65ACT19253.3420.6770.7010.034
75BCA19272.7900.5990.6420.066