Statistics and Breed-wide Allele Frequency - Llewellin Setter

Updated Jan 7, 2025

DLA Class I Haplotype Frequencies

DLA1 #	STR types	Llewellin Setter (n=160)
1008	386 373 289 182	0.050
1016	382 371 277 178	0.028
1026	390 369 289 186	0.056
1028	376 369 291 186	0.003
1030	380 373 293 178	0.019
1045	376 371 277 186	0.003
1054	382 379 277 184	0.087
1077	376 369 291 178	0.613
1134	384 365 291 178	0.112
1142	376 379 277 180	0.016
1201	382 381 277 181	0.003
1212	380 373 293 180	0.003
1294	386 365 287 183	0.003
1295	389 369 289 176	0.003

DLA Class II Haplotype Frequencies

DLA2 #	STR types	Llewellin Setter (n=160)
2002	343 327 280	0.028
2005	339 322 280	0.778
2012	345 322 280	0.059
2015	339 327 280	0.003
2018	339 324 284	0.016
2022	339 327 282	0.087
2023	341 323 282	0.013
2024	343 323 280	0.003
2035	341 323 280	0.003
2104	341 323 284	0.006
2138	343 324 288	0.003

Allele Frequencies

#	Locus Name	Allele	Llewellin Setter (n=160)
1	AHT121	80	0.075
		96	0.338
		98	0.041
		100	0.031
		102	0.309
		106	0.116
		108	0.003
		112	0.025
		114	0.063
2	AHT137	131	0.019
		137	0.044
		145	0.063
		147	0.472
		149	0.391
		151	0.013
3	AHTH130	119	0.297
		121	0.409
		123	0.006
		127	0.266
		129	0.013
		131	0.009
4	AHTh171-A	217	0.013
		219	0.469
		225	0.122
		229	0.003
		233	0.156
		235	0.075
		239	0.003
		241	0.159
5	AHTh260	240	0.094
		244	0.034
		246	0.350
		248	0.519
		254	0.003
6	AHTk211	87	0.147
		89	0.259
		91	0.175
		93	0.031
		95	0.388
7	AHTk253	284	0.372
		286	0.150
		288	0.188
		290	0.116
		292	0.175
8	C22.279	116	0.656
		118	0.013
		124	0.016
		126	0.231
		130	0.084
9	FH2001	124	0.144
		128	0.069
		132	0.253
		136	0.059
		140	0.106
		144	0.169
		148	0.194
		152	0.006
10	FH2054	148	0.059
		152	0.184
		156	0.091
		160	0.138
		164	0.016
		168	0.041
		172	0.116
		176	0.263
		180	0.078
		188	0.016
11	FH2848	238	0.116
		240	0.450
		242	0.413
		244	0.019
		246	0.003
12	INRA21	95	0.006
		97	0.663
		101	0.088
		103	0.175
		105	0.069
13	INU005	110	0.056
		124	0.091
		126	0.213
		128	0.641
14	INU030	144	0.644
		146	0.072
		148	0.072
		150	0.178
		152	0.031
		156	0.003
15	INU055	210	0.459
		212	0.184
		214	0.356
16	LEI004	85	0.663
		95	0.313
		97	0.003
		105	0.022
17	REN105L03	227	0.006
		231	0.088
		233	0.128
		235	0.381
		241	0.397
18	REN162C04	198	0.006
		202	0.838
		204	0.056
		206	0.100
19	REN169D01	202	0.594
		206	0.034
		210	0.022
		212	0.116
		216	0.081
		218	0.122
		220	0.022
		224	0.009
20	REN169O18	156	0.003
		160	0.009
		162	0.022
		164	0.294
		166	0.016
		168	0.600
		170	0.056
21	REN247M23	268	0.256
		270	0.297
		272	0.441
		274	0.006
22	REN54P11	222	0.306
		226	0.319
		232	0.231
		234	0.141
		238	0.003
23	REN64E19	145	0.328
		147	0.234
		149	0.006
		153	0.431
24	VGL0760	12	0.006
		18.2	0.331
		19.2	0.159
		20.2	0.338
		21.2	0.034
		22.2	0.091
		23.2	0.034
		24.2	0.006
25	VGL0910	13	0.028
		14	0.244
		15	0.116
		16	0.006
		17.1	0.016
		18.1	0.022
		19.1	0.094
		20.1	0.034
		21.1	0.266
		22.1	0.131
		23.1	0.006
		24.1	0.038
26	VGL1063	8	0.191
		9	0.081
		13	0.400
		14	0.103
		15	0.016
		18	0.078
		19	0.131
27	VGL1165	14	0.094
		16	0.006
		18	0.013
		19	0.038
		20	0.006
		21	0.169
		22	0.153
		23	0.303
		24	0.006
		27	0.003
		28	0.003
		30	0.194
		31	0.013
28	VGL1828	14	0.050
		15	0.003
		16	0.116
		18	0.003
		19	0.575
		20	0.178
		21	0.003
		22	0.072
29	VGL2009	9	0.003
		11	0.122
		13	0.147
		14	0.725
		15	0.003
30	VGL2409	14	0.003
		15	0.034
		16	0.391
		17	0.459
		18	0.084
		19	0.028
31	VGL2918	12	0.003
		13	0.513
		14	0.228
		15	0.022
		16	0.013
		17.3	0.006
		18.3	0.019
		19.3	0.194
		20.3	0.003
32	VGL3008	14	0.369
		15	0.094
		16	0.016
		18	0.266
		18.2	0.003
		19	0.156
		20	0.091
		21	0.006
33	VGL3235	12	0.303
		13	0.341
		14	0.153
		15	0.091
		16	0.003
		17	0.072
		18	0.034
		19	0.003

Standard genetic assessment based on 33 autosomal STR loci

Llewellin Setter

		N	Na	Ne	Ho	He	F
	Mean	160	6.515	3.253	0.643	0.650	0.011
	SE		0.405	0.213	0.022	0.022	0.009

Standard genetic assessment based on 7 STRs in the DLA region

Llewellin Setter

		N	Na	Ne	Ho	He	F
	Mean	160	5.429	1.675	0.346	0.375	0.072
	SE		0.566	0.138	0.044	0.049	0.014

Standard genetic assessment for individual STR loci

Llewellin Setter

#	Locus	N	Na	Ne	Ho	He	F
1	AHT121	160	9	4.241	0.731	0.764	0.043
2	AHT137	160	6	2.621	0.569	0.618	0.080
3	AHTH130	160	6	3.062	0.669	0.673	0.007
4	AHTh171-A	160	8	3.446	0.706	0.710	0.005
5	AHTh260	160	5	2.490	0.638	0.598	-0.065
6	AHTk211	160	5	3.695	0.725	0.729	0.006
7	AHTk253	160	5	4.168	0.781	0.760	-0.028
8	C22.279	160	5	2.034	0.544	0.508	-0.070
9	FH2001	160	8	5.871	0.781	0.830	0.058
10	FH2054	160	10	6.445	0.869	0.845	-0.028
11	FH2848	160	5	2.588	0.594	0.614	0.032
12	INRA21	160	5	2.075	0.488	0.518	0.059
13	INU005	160	4	2.142	0.544	0.533	-0.020
14	INU030	160	6	2.186	0.531	0.543	0.021
15	INU055	160	3	2.689	0.688	0.628	-0.095
16	LEI004	160	4	1.862	0.413	0.463	0.109
17	REN105L03	160	5	3.058	0.619	0.673	0.081
18	REN162C04	160	4	1.399	0.288	0.285	-0.007
19	REN169D01	160	8	2.567	0.581	0.610	0.048
20	REN169O18	160	7	2.221	0.544	0.550	0.011
21	REN247M23	160	4	2.874	0.619	0.652	0.051
22	REN54P11	160	5	3.722	0.675	0.731	0.077
23	REN64E19	160	4	2.869	0.625	0.651	0.041
24	VGL0760	160	8	3.851	0.769	0.740	-0.038
25	VGL0910	160	12	5.763	0.794	0.826	0.040
26	VGL1063	160	7	4.217	0.731	0.763	0.041
27	VGL1165	160	13	5.209	0.838	0.808	-0.036
28	VGL1828	160	8	2.608	0.575	0.617	0.067
29	VGL2009	160	5	1.779	0.488	0.438	-0.113
30	VGL2409	160	6	2.683	0.650	0.627	-0.036
31	VGL2918	160	9	2.831	0.594	0.647	0.082
32	VGL3008	160	8	4.028	0.769	0.752	-0.023
33	VGL3235	160	8	4.066	0.781	0.754	-0.036

Standard genetic assessment for 7 STRs in the DLA region

Llewellin Setter

#	Locus	N	Na	Ne	Ho	He	F
1	DLA I-3CCA	160	7	2.295	0.525	0.564	0.070
2	DLA I-4ACA	160	6	2.059	0.463	0.514	0.101
3	DLA I-4BCT	160	5	1.781	0.400	0.438	0.088
4	DLA1131	160	8	1.639	0.363	0.390	0.070
5	5ACA	160	4	1.270	0.200	0.213	0.060
6	5ACT	160	4	1.396	0.250	0.284	0.118
7	5BCA	160	4	1.288	0.225	0.224	-0.005

Veterinary Genetics Laboratory

Statistics and Breed-wide Allele Frequency - Llewellin Setter

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

Statistics and Breed-wide Allele Frequency - Llewellin Setter

DLA Class I Haplotype Frequencies

DLA Class II Haplotype Frequencies

Allele Frequencies

Standard genetic assessment based on 33 autosomal STR loci

Standard genetic assessment based on 7 STRs in the DLA region

Standard genetic assessment for individual STR loci

Standard genetic assessment for 7 STRs in the DLA region

Contact the VGL

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